Module Identifier BS24810  
Module Title AQUATIC & TERRESTRIAL MICROBIAL ECOLOGY  
Academic Year 2005/2006  
Co-ordinator Dr Gareth W Griffith  
Semester Semester 2  
Other staff Dr Alexandre M Anesio  
Pre-Requisite BS11110  
Course delivery Seminars / Tutorials   2 x 3 hour seminars  
  Lecture    
  Practical   2 x 3 hour workshops  
Assessment
Assessment TypeAssessment Length/DetailsProportion
Semester Assessment SEMINAR AND POSTER PRESENTATIONS  30%
Semester Assessment2 Hours EXAMINATION  70%
Supplementary Exam2 Hours Examination  70%
Supplementary Assessment Resubmission of failed coursework or alternative  30%

Learning outcomes

On successful completion of this module students should be able to:
explain how microbes can be studied in natural habitats and the limitations of these methods

describe the unique roles played by different microbes in the carbon and nitrogen cycles

demonstrate a knowledge and understanding of how microbes interact with higher organisms

utilize IT skills to analyze and evaluate literature for seminars and group poster presentations

perform in a team to prepare and present seminars and posters on specific topics in microbial ecology

Aims

Due to staff changes (retirement and new appointments) BS23420 is no longer viable and this module takes the microbiological content of BS23420 together with expertise in aquatic microbiology of a recently appointed member of staff to create a module which will prove popular to a wider cross-section of students. A similar module entitled Microbial Ecology did run in IBS up to 1999 and attracted 60-90 students per year. Availability of this module will strengthen the Microbiology and Environmental Biology degree schemes

Brief description

Via a series of lectures and workshops the module will develop a knowledge and understanding of the role played by microorganisms (fungi, bacteria, viruses, algae) in terrestrial and aquatic ecosystems, focusing on their importance in biogeochemical cycling as well as the methodologies used to study these organisms.   

Content

Lectures

To include coverage of methods in microbial ecology (traditional/molecular), biochemical and genetic diversity within Bacteria/Archaea, role of fungi in lignocellulose degradation, dynamics of bacteria/virus interactions in lakes/streams, role of fungi in processing of debris in streams, deep ocean black smokers, primary productivity in pelagic habitats, interactions between microbes and animals, interactions (fungus farming/ oral microbiology/rumen ecosystem), between microbes and plants (mycorrhizas/nitrogen fixers).   

Seminars

To include student presentation of seminars of specific areas of microbial ecology (this will allow the participants a degree of specialization according to their degree scheme).

Workshops

To include the presentation of group posters prepared on specific case studies in microbial ecology.

Module Skills

Problem_solving Practical classes, seminars and poster preparation will provide opportunities to develop problem solving skills.  
Research skills Practical work, seminars and poster preparation using library and www resources.  
Communication Attendance at lectures and preparation and presentation of seminars and posters will provide opportunities to develop presentational (oral and written) and listening skills.  
Improving own Learning and Performance Attendance at lectures, seminars and workshops, working to deadlines for seminars and workshops, and preparation for examinations will require the development of self management strategies and personal action plans.  
Team work Production and presentation of group posters. Practical sessions.  
Information Technology IT skills developed in seminar and poster presentation via o library and www resources to source information o use of PowerPoint o poster preparation.  
Application of Number Not relevant.  
Personal Development and Career planning Awareness of personal and career development skills will be developed through the coursework, e.g. teamwork for posters.  

Reading Lists

Books
Atlas, Ronald M. (c1998.) Microbial ecology : fundamentals and applications /Ronald M. Atlas, Richard Bartha. 0805306552 :
Bardgett, Richard D. (2005.) The biology of soil :a community and ecosystem approach /Richard D. Bardgett. http://www.loc.gov/catdir/toc/ecip055/2004030579.html 0198525028
Smith, S. E. (1997.) Mycorrhizal symbiosis /Sally E. Smith and David J. Read. 0126528403 (alk. paper)

Notes

This module is at CQFW Level 5