Rule 846: eval(_1,_2,b0.0_1.0e-8),classification(_2,viridiplantae) = 1 eval(_1,_2,b0.0_1.0e-8),classification(_2,lactobacillaceae),db_ref(_2,prosite) = 1 eval(_1,_2,b0.0_1.0e-8),keyword(_2,inner_membrane),db_ref(_2,prints) = 0 eval(_1,_2,b0.0_1.0e-8),mol_wt(_2,b53922_74079),classification(_2,rickettsiales) = 1 eval(_1,_2,b0.0_1.0e-8),sq_len(_2,b16_344),classification(_2,methanococcus) = 0 cechdeeigagasp_gasch1_YP_fructose_vs_reference_pool_car_2 > -0.67 -> class 5/10/0/0 "aminoacyl-tRNA-synthetases" Evaluation on training data (1648 items): ytyhr020w 5,10,0,0 "null" "strong similarity to human glutamyl-prolyl-tRNA synthetase and fruit fly multifunctional aminoacyl-tRNA synthetase" ytypl104w 40,16,0,0 "MSD1" "aspartate--tRNA ligase, mitochondrial" 5,10,0,0 "MSD1" "aspartate--tRNA ligase, mitochondrial" ytypl040c 40,16,0,0 "ISM1" "isoleucine--tRNA ligase, mitochondrial" 5,10,0,0 "ISM1" "isoleucine--tRNA ligase, mitochondrial" ytyor168w 40,3,0,0 "GLN4" "glutaminyl-tRNA synthetase" 5,10,0,0 "GLN4" "glutaminyl-tRNA synthetase" ytypr047w 40,16,0,0 "MSF1" "phenylalanine--tRNA ligase alpha chain, mitochondrial" 5,10,0,0 "MSF1" "phenylalanine--tRNA ligase alpha chain, mitochondrial" 6,4,0,0 "MSF1" "phenylalanine--tRNA ligase alpha chain, mitochondrial" ytyil078w 1,3,16,0 "THS1" "threonyl tRNA synthetase, cytosolic" 40,3,0,0 "THS1" "threonyl tRNA synthetase, cytosolic" 5,10,0,0 "THS1" "threonyl tRNA synthetase, cytosolic" ytygl245w 5,10,0,0 "null" "strong similarity to glutamine--tRNA ligase" ytypr081c 5,10,0,0 "null" "strong similarity to glycyl-tRNA synthetases" ytydr341c 40,3,0,0 "null" "arginyl-tRNA synthetase, cytosolic" 5,10,0,0 "null" "arginyl-tRNA synthetase, cytosolic" ytypr033c 40,10,0,0 "HTS1" "histidine--tRNA ligase, mitochondrial" 40,3,0,0 "HTS1" "histidine--tRNA ligase, mitochondrial" 5,10,0,0 "HTS1" "histidine--tRNA ligase, mitochondrial" ytylr382c 4,5,5,1 "NAM2" "leucine--tRNA ligase precursor, mitochondrial" 40,16,0,0 "NAM2" "leucine--tRNA ligase precursor, mitochondrial" 5,10,0,0 "NAM2" "leucine--tRNA ligase precursor, mitochondrial" ytygr171c 40,16,0,0 "MSM1" "methionyl-tRNA synthetase" 5,10,0,0 "MSM1" "methionyl-tRNA synthetase" ytygr094w 40,16,0,0 "VAS1" "valyl-tRNA synthetase" 40,3,0,0 "VAS1" "valyl-tRNA synthetase" 5,10,0,0 "VAS1" "valyl-tRNA synthetase" ytyer087w 5,10,0,0 "null" "similarity to E.coli prolyl-tRNA synthetase" ytynl247w 5,10,0,0 "null" "cysteinyl-tRNA synthetase" Training Accuracy: 15/15 (100.00%) Training Frequency class '5/10/0/0': 18/1648 (1.09%) Evaluation on validation data (854 items): ytylr060w 40,3,0,0 "FRS1" "phenylalanyl-tRNA synthetase, alpha subunit, cytosolic" 5,10,0,0 "FRS1" "phenylalanyl-tRNA synthetase, alpha subunit, cytosolic" ytygr264c 40,3,0,0 "MES1" "methionyl-tRNA synthetase" 5,10,0,0 "MES1" "methionyl-tRNA synthetase" ytycr042c - 4,5,1,1 "TSM1" "component of TFIID complex" 4,5,1,4 "TSM1" "component of TFIID complex" 40,10,0,0 "TSM1" "component of TFIID complex" Validation Accuracy: 2/3 (66.67%) Validation Frequency class '5/10/0/0': 8/854 (0.94%) Evaluation on propertest data (1299 items): ytyol033w 40,16,0,0 "MSE1" "glutamyl-tRNA synthetase, mitochondrial" 5,10,0,0 "MSE1" "glutamyl-tRNA synthetase, mitochondrial" ytydr037w 40,3,0,0 "KRS1" "lysyl-tRNA synthetase, cytosolic" 5,10,0,0 "KRS1" "lysyl-tRNA synthetase, cytosolic" ytykl194c 40,16,0,0 "MST1" "threonine--tRNA ligase, mitochondrial" 5,10,0,0 "MST1" "threonine--tRNA ligase, mitochondrial" ytyhr091c 40,16,0,0 "MSR1" "arginyl-tRNA synthetase, mitochondrial" 5,10,0,0 "MSR1" "arginyl-tRNA synthetase, mitochondrial" Propertest Accuracy: 4/4 (100.00%) Propertest Frequency class '5/10/0/0': 11/1299 (0.85%) New (unknown) data (854 items): ytydr109c - 99,0,0,0 "null" "similarity to MPA43P" ------------------ Rule 934: eval(_1,_2,b4.5e-2_1.1),classification(_2,klebsiella) = 1 eval(_1,_2,gte1.1),mol_wt(_2,b1485_38502),classification(_2,thermotogales) = 1 eval(_1,_2,gte1.1),sq_len(_2,b662_970),classification(_2,helicobacter_group) = 0 eval(_1,_2,b1.0e-8_4.0e-4),classification(_2,escherichia),db_ref(_2,ecogene) = 1 eval(_1,_2,b0.0_1.0e-8),keyword(_2,inner_membrane),db_ref(_2,prints) = 1 -> class 67/28/0/0 "drug transporters" Evaluation on training data (1648 items): ytypr198w 11,7,0,0 "SGE1" "drug resistance protein" 67,28,0,0 "SGE1" "drug resistance protein" ytycl069w 11,7,0,0 "null" "strong similarity to drug resistance protein SGE1" 67,28,0,0 "null" "strong similarity to drug resistance protein SGE1" ytymr279c 11,7,0,0 "null" "strong similarity to aminotriazole resistance protein" 67,28,0,0 "null" "strong similarity to aminotriazole resistance protein" ytyil121w 11,7,0,0 "null" "similarity to antibiotic resistance proteins" 67,28,0,0 "null" "similarity to antibiotic resistance proteins" ytygr138c 11,7,0,0 "TPO2" "polyamine transport protein" 67,28,0,0 "TPO2" "polyamine transport protein" ytyel065w 11,7,0,0 "SIT1" "probable multidrug resistance protein" 67,28,0,0 "SIT1" "probable multidrug resistance protein" 67,4,1,1 "SIT1" "probable multidrug resistance protein" ytyor273c 11,7,0,0 "TPO4" "polyamine transporter" 67,28,0,0 "TPO4" "polyamine transporter" ytybr043c 11,7,0,0 "null" "similarity to benomyl/methotrexate resistance protein" 67,28,0,0 "null" "similarity to benomyl/methotrexate resistance protein" ytyil013c 40,2,0,0 "PDR11" "membrane transporter" 67,28,0,0 "PDR11" "membrane transporter" 67,50,25,0 "PDR11" "membrane transporter" ytykr105c 11,7,0,0 "null" "strong similarity to SGE1P and hypothetical protein YCL069w" 67,28,0,0 "null" "strong similarity to SGE1P and hypothetical protein YCL069w" Training Accuracy: 10/10 (100.00%) Training Frequency class '67/28/0/0': 19/1648 (1.15%) Evaluation on validation data (854 items): ytynl280c - 1,6,1,0 "ERG24" "C-14 sterol reductase" ytypl274w - 1,1,7,0 "SAM3" "high affinity S-adenosylmethionine permease" 67,10,0,0 "SAM3" "high affinity S-adenosylmethionine permease" ytylr138w - 13,1,1,3 "NHA1" "putative Na+/H+ antiporter" 13,1,1,99 "NHA1" "putative Na+/H+ antiporter" 67,4,1,2 "NHA1" "putative Na+/H+ antiporter" ytypr156c 11,7,0,0 "TPO3" "polyamine transporter" 67,28,0,0 "TPO3" "polyamine transporter" ytyor378w 11,7,0,0 "null" "strong similarity to aminotriazole resistance protein" 67,28,0,0 "null" "strong similarity to aminotriazole resistance protein" ytynl318c - 1,5,7,0 "HXT14" "hexose transport protein" 40,2,0,0 "HXT14" "hexose transport protein" 67,7,0,0 "HXT14" "hexose transport protein" 8,19,0,0 "HXT14" "hexose transport protein" ytygr036c - 30,1,0,0 "CAX4" "required for full levels of dolichol-linked oligosaccharides in the endoplasmic reticulum" 6,7,0,0 "CAX4" "required for full levels of dolichol-linked oligosaccharides in the endoplasmic reticulum" Validation Accuracy: 2/7 (28.57%) Validation Frequency class '67/28/0/0': 4/854 (0.47%) Evaluation on propertest data (1299 items): ytygl225w - 40,8,0,0 "GOG5" "GDP-mannose transporter into the lumen of the Golgi" 67,7,0,0 "GOG5" "GDP-mannose transporter into the lumen of the Golgi" 8,7,0,0 "GOG5" "GDP-mannose transporter into the lumen of the Golgi" ytyhl040c 11,7,0,0 "ARN1" "ferrichrome-type siderophore transporter" 67,28,0,0 "ARN1" "ferrichrome-type siderophore transporter" ytynr056c - 1,6,13,0 "BIO5" "similarity to choline transport protein HNM1P" 67,10,0,0 "BIO5" "similarity to choline transport protein HNM1P" 67,13,0,0 "BIO5" "similarity to choline transport protein HNM1P" ytyjl214w - 1,5,7,0 "HXT8" "hexose transport protein" 40,2,0,0 "HXT8" "hexose transport protein" 67,7,0,0 "HXT8" "hexose transport protein" 8,19,0,0 "HXT8" "hexose transport protein" ytydr307w - 1,5,1,0 "null" "similarity to PMT1P, PMT2P, PMT3P and PMT5P" 6,7,0,0 "null" "similarity to PMT1P, PMT2P, PMT3P and PMT5P" ytyml123c - 1,4,7,0 "PHO84" "high-affinity inorganic phosphate/H+ symporter" 13,1,1,3 "PHO84" "high-affinity inorganic phosphate/H+ symporter" 13,1,3,3 "PHO84" "high-affinity inorganic phosphate/H+ symporter" 40,2,0,0 "PHO84" "high-affinity inorganic phosphate/H+ symporter" 67,4,7,0 "PHO84" "high-affinity inorganic phosphate/H+ symporter" 67,7,0,0 "PHO84" "high-affinity inorganic phosphate/H+ symporter" 8,19,0,0 "PHO84" "high-affinity inorganic phosphate/H+ symporter" ytyil120w 11,7,0,0 "QDR1" "similarity to antibiotic resistance proteins" 67,28,0,0 "QDR1" "similarity to antibiotic resistance proteins" ytyer043c - 1,7,1,0 "SAH1" "S-adenosyl-L-homocysteine hydrolase" ytyol156w - 1,5,7,0 "HXT11" "low affinity glucose transport protein" 40,2,0,0 "HXT11" "low affinity glucose transport protein" 67,7,0,0 "HXT11" "low affinity glucose transport protein" 8,19,0,0 "HXT11" "low affinity glucose transport protein" ytyol158c 11,7,0,0 "ENB1" "a gene of the major facilitator superfamily encodes a transporter for enterobactin" 67,28,0,0 "ENB1" "a gene of the major facilitator superfamily encodes a transporter for enterobactin" ytyor192c - 1,3,19,0 "null" "strong similarity to Thi10p" 67,16,0,0 "null" "strong similarity to Thi10p" 67,19,0,0 "null" "strong similarity to Thi10p" ytymr011w - 1,5,7,0 "HXT2" "high-affinity hexose transporter" 40,2,0,0 "HXT2" "high-affinity hexose transporter" 67,7,0,0 "HXT2" "high-affinity hexose transporter" 8,19,0,0 "HXT2" "high-affinity hexose transporter" ytybr296c - 1,4,7,0 "PHO89" "Na+-coupled phosphate transport protein, high affinity" 13,1,1,99 "PHO89" "Na+-coupled phosphate transport protein, high affinity" 13,1,3,3 "PHO89" "Na+-coupled phosphate transport protein, high affinity" 67,4,7,0 "PHO89" "Na+-coupled phosphate transport protein, high affinity" ytyil088c - 67,99,0,0 "null" "weak similarity to A.thaliana aminoacid permease AAP4" ytydr038c - 13,1,1,99 "ENA5" "P-type ATPase involved in Na+ efflux" 67,50,22,0 "ENA5" "P-type ATPase involved in Na+ efflux" ytyjl062w - 40,1,0,0 "LAS21" "required for addition of a side chain to the glycosylphospatidylinositol (GPI) core structure" ytygl006w - 13,1,1,99 "PMC1" "Ca2+-transporting P-type ATPase" 40,25,0,0 "PMC1" "Ca2+-transporting P-type ATPase" 67,4,1,2 "PMC1" "Ca2+-transporting P-type ATPase" 67,50,22,0 "PMC1" "Ca2+-transporting P-type ATPase" 8,13,0,0 "PMC1" "Ca2+-transporting P-type ATPase" Propertest Accuracy: 3/17 (17.65%) Propertest Frequency class '67/28/0/0': 12/1299 (0.92%) New (unknown) data (854 items): ytypl033c - 99,0,0,0 "null" "weak similarity to YLR426w" ytydl054c - 99,0,0,0 "null" "similarity to hypothetical protein C. albicans" ytybr187w - 99,0,0,0 "null" "similarity to mouse putative transmembrane protein FT27" ytylr047c - 99,0,0,0 "null" "similarity to hypothetical protein YGL160w" ------------------ Rule 899: eval(_1,_2,gte1.1),sq_len(_2,b16_344),classification(_2,viruses) = 0 eval(_1,_2,b0.0_1.0e-8),keyword(_2,inner_membrane),db_ref(_2,prints) = 1 eval(_1,_2,b0.0_1.0e-8),classification(_2,enterobacteriaceae),db_ref(_2,embl) = 0 -> class 8/4/0/0 "mitochondrial transport" Evaluation on training data (1648 items): ytydl198c 40,16,0,0 "YHM1" "member of the mitochondrial carrier family (MCF)" 67,7,0,0 "YHM1" "member of the mitochondrial carrier family (MCF)" 8,4,0,0 "YHM1" "member of the mitochondrial carrier family (MCF)" ytyjl133w 4,5,5,1 "MRS3" "RNA splicing protein and member of the mitochondrial carrier family (MCF)" 40,16,0,0 "MRS3" "RNA splicing protein and member of the mitochondrial carrier family (MCF)" 8,4,0,0 "MRS3" "RNA splicing protein and member of the mitochondrial carrier family (MCF)" ytyil006w 1,7,10,0 "null" "similarity to FLX1P" 67,99,0,0 "null" "similarity to FLX1P" 8,4,0,0 "null" "similarity to FLX1P" ytykr052c 4,5,5,1 "MRS4" "RNA splicing protein and member of the mitochondrial carrier family (MCF)" 40,16,0,0 "MRS4" "RNA splicing protein and member of the mitochondrial carrier family (MCF)" 8,4,0,0 "MRS4" "RNA splicing protein and member of the mitochondrial carrier family (MCF)" ytyjr095w 1,5,4,0 "SFC1" "succinate-fumarate transporter" 1,5,7,0 "SFC1" "succinate-fumarate transporter" 40,16,0,0 "SFC1" "succinate-fumarate transporter" 67,7,0,0 "SFC1" "succinate-fumarate transporter" 8,4,0,0 "SFC1" "succinate-fumarate transporter" ytylr348c 1,4,7,0 "DIC1" "dicarboxylate carrier protein" 1,5,7,0 "DIC1" "dicarboxylate carrier protein" 40,16,0,0 "DIC1" "dicarboxylate carrier protein" 67,4,7,0 "DIC1" "dicarboxylate carrier protein" 67,7,0,0 "DIC1" "dicarboxylate carrier protein" 8,4,0,0 "DIC1" "dicarboxylate carrier protein" ytymr166c 8,4,0,0 "null" "similarity to members of the mitochondrial carrier protein family" ytybr104w 40,16,0,0 "YMC2" "mitochondrial carrier protein (MCF)" 8,4,0,0 "YMC2" "mitochondrial carrier protein (MCF)" ytypl134c 67,16,0,0 "ODC1" "similarity to ADP,ATP carrier proteins" 8,4,0,0 "ODC1" "similarity to ADP,ATP carrier proteins" ytygr096w 1,3,19,0 "null" "hypothetical mitochondrial transport protein" 67,16,0,0 "null" "hypothetical mitochondrial transport protein" 8,4,0,0 "null" "hypothetical mitochondrial transport protein" ytyfr045w - 67,7,0,0 "null" "similarity to mitochondrial citrate transport proteins" ytygr257c 8,4,0,0 "null" "similarity to C.elegans C16C10.1" ytydl119c 40,16,0,0 "null" "similarity to bovine Graves disease carrier protein" 8,4,0,0 "null" "similarity to bovine Graves disease carrier protein" ytynl083w 8,4,0,0 "null" "weak similarity to rabbit peroxisomal Ca-dependent solute carrier" ytykl120w 40,16,0,0 "OAC1" "similarity to mitochondrial uncoupling proteins (MCF)" 67,4,7,0 "OAC1" "similarity to mitochondrial uncoupling proteins (MCF)" 8,4,0,0 "OAC1" "similarity to mitochondrial uncoupling proteins (MCF)" Training Accuracy: 14/15 (93.33%) Training Frequency class '8/4/0/0': 38/1648 (2.31%) Evaluation on validation data (854 items): ytyer053c 1,4,7,0 "null" "strong similarity to mitochondrial phosphate carrier protein" 67,4,7,0 "null" "strong similarity to mitochondrial phosphate carrier protein" 8,4,0,0 "null" "strong similarity to mitochondrial phosphate carrier protein" ytyor100c 8,4,0,0 "CRC1" "mitochondrial carnitine carrier, member of the mitochondrial carrier (MCF) family" ytypr058w 40,16,0,0 "YMC1" "mitochondrial carrier protein (MCF)" 67,99,0,0 "YMC1" "mitochondrial carrier protein (MCF)" 8,4,0,0 "YMC1" "mitochondrial carrier protein (MCF)" ytyjr077c 1,4,7,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 13,1,3,3 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 40,16,0,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 67,4,7,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 8,4,0,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" Validation Accuracy: 4/4 (100.00%) Validation Frequency class '8/4/0/0': 13/854 (1.52%) Evaluation on propertest data (1299 items): ytybr085w 1,3,19,0 "AAC3" "ADP/ATP carrier protein (MCF)" 40,16,0,0 "AAC3" "ADP/ATP carrier protein (MCF)" 67,16,0,0 "AAC3" "ADP/ATP carrier protein (MCF)" 8,4,0,0 "AAC3" "ADP/ATP carrier protein (MCF)" ytyil134w 1,7,10,0 "FLX1" "FAD carrier protein (MCF), mitochondrial" 40,16,0,0 "FLX1" "FAD carrier protein (MCF), mitochondrial" 67,99,0,0 "FLX1" "FAD carrier protein (MCF), mitochondrial" 8,4,0,0 "FLX1" "FAD carrier protein (MCF), mitochondrial" ytybl030c 1,3,19,0 "PET9" "ADP/ATP carrier protein (MCF)" 40,16,0,0 "PET9" "ADP/ATP carrier protein (MCF)" 67,16,0,0 "PET9" "ADP/ATP carrier protein (MCF)" 8,4,0,0 "PET9" "ADP/ATP carrier protein (MCF)" ytyor130c 1,1,7,0 "ORT1" "ornithine transport protein of mitochondria involved in arginine metabolism, member of the mitochondrial carrier family (MCF)" 40,16,0,0 "ORT1" "ornithine transport protein of mitochondria involved in arginine metabolism, member of the mitochondrial carrier family (MCF)" 67,10,0,0 "ORT1" "ornithine transport protein of mitochondria involved in arginine metabolism, member of the mitochondrial carrier family (MCF)" 8,4,0,0 "ORT1" "ornithine transport protein of mitochondria involved in arginine metabolism, member of the mitochondrial carrier family (MCF)" ytyel006w 67,99,0,0 "null" "similarity to peroxisomal membrane and mitochondrial carrier proteins" 8,4,0,0 "null" "similarity to peroxisomal membrane and mitochondrial carrier proteins" ytypr011c 1,3,19,0 "null" "similarity to ADP/ATP carrier proteins and Graves disease carrier protein" 67,16,0,0 "null" "similarity to ADP/ATP carrier proteins and Graves disease carrier protein" 8,4,0,0 "null" "similarity to ADP/ATP carrier proteins and Graves disease carrier protein" ytynl003c 67,99,0,0 "PET8" "member of the mitochondrial carrier (MCF) family" 8,4,0,0 "PET8" "member of the mitochondrial carrier (MCF) family" ytybr192w 2,13,0,0 "RIM2" "mitochondrial carrier protein (MCF)" 40,16,0,0 "RIM2" "mitochondrial carrier protein (MCF)" 67,16,0,0 "RIM2" "mitochondrial carrier protein (MCF)" 8,4,0,0 "RIM2" "mitochondrial carrier protein (MCF)" ytymr056c 1,3,19,0 "AAC1" "ADP/ATP carrier protein (MCF)" 40,16,0,0 "AAC1" "ADP/ATP carrier protein (MCF)" 67,16,0,0 "AAC1" "ADP/ATP carrier protein (MCF)" 8,4,0,0 "AAC1" "ADP/ATP carrier protein (MCF)" ytyhr002w 1,3,19,0 "null" "similarity to bovine mitochondrial carrier protein/Grave's disease carrier protein" 67,16,0,0 "null" "similarity to bovine mitochondrial carrier protein/Grave's disease carrier protein" 8,4,0,0 "null" "similarity to bovine mitochondrial carrier protein/Grave's disease carrier protein" Propertest Accuracy: 10/10 (100.00%) Propertest Frequency class '8/4/0/0': 24/1299 (1.85%) New (unknown) data (854 items): ytypr128c - 99,0,0,0 "ANT1" "peroxisomal ATP carrier" ytydr470c - 99,0,0,0 "UGO1" "similarity to chromosome segregation protein CSE1P" ------------------ Rule 2: yeast_to_yeast(_1,_2,b2.0e-7_5.0e-4),eval(_1,_3,gte1.1),classification(_3,paramecium) = 0 cechdeeigagasp_gasch2_DES459_mec1___mock_irradiation___5_min <= -0.281 eval(_1,_2,gte1.1),classification(_2,eumalacostraca),db_ref(_2,pfam) = 0 eval(_1,_2,b4.0e-4_4.5e-2),classification(_2,amphibia),db_ref(_2,transfac) = 0 cechdeeigagasp_gasch1_Nitrogen_Depletion_4_h <= 0.92 cechdeeigagasp_gasch1_YP_fructose_vs_reference_pool_car_2 <= -0.67 eval(_1,_2,b1.0e-8_4.0e-4),classification(_2,stereales),db_ref(_2,pir) = 0 -> class 2/13/0/0 "respiration" Evaluation on training data (1648 items): ytyel053c 2,13,0,0 "MAK10" "glucose-repressible protein" ytylr295c 13,1,1,3 "ATP14" "F1F0-ATPase complex, subunit h" 2,13,0,0 "ATP14" "F1F0-ATPase complex, subunit h" 40,16,0,0 "ATP14" "F1F0-ATPase complex, subunit h" 67,50,22,0 "ATP14" "F1F0-ATPase complex, subunit h" 8,4,0,0 "ATP14" "F1F0-ATPase complex, subunit h" ytydl004w 13,1,1,3 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 2,13,0,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 40,16,0,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 67,50,22,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 8,4,0,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" ytymr256c 2,13,0,0 "COX7" "cytochrome-c oxidase, subunit VII" 40,16,0,0 "COX7" "cytochrome-c oxidase, subunit VII" 6,10,0,0 "COX7" "cytochrome-c oxidase, subunit VII" ytynl052w 2,13,0,0 "COX5A" "cytochrome-c oxidase chain V.A precursor" 40,16,0,0 "COX5A" "cytochrome-c oxidase chain V.A precursor" ytydr377w 2,13,0,0 "ATP17" "ATP synthase complex, subunit f" 40,16,0,0 "ATP17" "ATP synthase complex, subunit f" 6,10,0,0 "ATP17" "ATP synthase complex, subunit f" ytybr039w 13,1,1,3 "ATP3" "F1F0-ATPase complex, F1 gamma subunit" 2,13,0,0 "ATP3" "F1F0-ATPase complex, F1 gamma subunit" 40,16,0,0 "ATP3" "F1F0-ATPase complex, F1 gamma subunit" 67,50,22,0 "ATP3" "F1F0-ATPase complex, F1 gamma subunit" 8,4,0,0 "ATP3" "F1F0-ATPase complex, F1 gamma subunit" ytykl016c 13,1,1,3 "ATP7" "F1F0-ATPase complex, FO D subunit" 2,13,0,0 "ATP7" "F1F0-ATPase complex, FO D subunit" 40,16,0,0 "ATP7" "F1F0-ATPase complex, FO D subunit" 67,50,22,0 "ATP7" "F1F0-ATPase complex, FO D subunit" 8,4,0,0 "ATP7" "F1F0-ATPase complex, FO D subunit" ytylr168c - 40,16,0,0 "(MSF1)" "probably involved in intramitochondrial protein sorting" 6,4,0,0 "(MSF1)" "probably involved in intramitochondrial protein sorting" ytymr145c 2,13,0,0 "NDH1" "mitochondrial cytosolically directed NADH dehydrogenase" 40,16,0,0 "NDH1" "mitochondrial cytosolically directed NADH dehydrogenase" ytybl078c - 40,3,0,0 "AUT7" "essential for autophagy" 6,13,4,0 "AUT7" "essential for autophagy" 8,22,0,0 "AUT7" "essential for autophagy" ytydr529c 2,13,0,0 "QCR7" "ubiquinol--cytochrome-c reductase subunit 7" 40,16,0,0 "QCR7" "ubiquinol--cytochrome-c reductase subunit 7" 6,10,0,0 "QCR7" "ubiquinol--cytochrome-c reductase subunit 7" ytyjr048w 2,13,0,0 "CYC1" "cytochrome-c isoform 1" 40,16,0,0 "CYC1" "cytochrome-c isoform 1" ytygl191w 2,13,0,0 "COX13" "cytochrome-c oxidase chain VIa" 40,16,0,0 "COX13" "cytochrome-c oxidase chain VIa" ytypl271w 13,1,1,3 "ATP15" "F1F0-ATPase complex, F1 epsilon subunit" 2,13,0,0 "ATP15" "F1F0-ATPase complex, F1 epsilon subunit" 40,16,0,0 "ATP15" "F1F0-ATPase complex, F1 epsilon subunit" 67,50,22,0 "ATP15" "F1F0-ATPase complex, F1 epsilon subunit" 8,4,0,0 "ATP15" "F1F0-ATPase complex, F1 epsilon subunit" Training Accuracy: 13/15 (86.67%) Training Frequency class '2/13/0/0': 39/1648 (2.37%) Evaluation on validation data (854 items): ytyll009c 13,1,1,1 "COX17" "interacts genetically with SCO1 and SCO2 in cytochrome oxidase assembly" 2,13,0,0 "COX17" "interacts genetically with SCO1 and SCO2 in cytochrome oxidase assembly" 40,16,0,0 "COX17" "interacts genetically with SCO1 and SCO2 in cytochrome oxidase assembly" 40,3,0,0 "COX17" "interacts genetically with SCO1 and SCO2 in cytochrome oxidase assembly" 6,10,0,0 "COX17" "interacts genetically with SCO1 and SCO2 in cytochrome oxidase assembly" ytyfr033c 2,13,0,0 "QCR6" "ubiquinol--cytochrome-c reductase 17K protein" 40,16,0,0 "QCR6" "ubiquinol--cytochrome-c reductase 17K protein" ytypl078c 13,1,1,3 "ATP4" "F1F0-ATPase complex, F0 subunit B" 2,13,0,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" 40,16,0,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" 67,50,22,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" 8,4,0,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" Validation Accuracy: 3/3 (100.00%) Validation Frequency class '2/13/0/0': 16/854 (1.87%) Evaluation on propertest data (1299 items): ytylr395c 2,13,0,0 "COX8" "cytochrome-c oxidase chain VIII" 40,16,0,0 "COX8" "cytochrome-c oxidase chain VIII" ytydr298c 13,1,1,3 "ATP5" "F1F0-ATPase complex, OSCP subunit" 2,13,0,0 "ATP5" "F1F0-ATPase complex, OSCP subunit" 40,16,0,0 "ATP5" "F1F0-ATPase complex, OSCP subunit" 67,50,22,0 "ATP5" "F1F0-ATPase complex, OSCP subunit" 8,4,0,0 "ATP5" "F1F0-ATPase complex, OSCP subunit" ytykr016w 2,13,0,0 "null" "weak similarity to mysoin heavy chain proteins" ytyil101c - 4,5,1,4 "XBP1" "stress-induced transcriptional repressor" ytygl187c 2,13,0,0 "COX4" "cytochrome-c oxidase chain IV" 40,16,0,0 "COX4" "cytochrome-c oxidase chain IV" ytynl252c - 40,16,0,0 "MRPL17" "ribosomal protein of the large subunit (YmL30), mitochondrial" 5,1,0,0 "MRPL17" "ribosomal protein of the large subunit (YmL30), mitochondrial" ytypl013c - 40,16,0,0 "null" "strong similarity to N.crassa mitochondrial ribosomal protein S24" 5,1,0,0 "null" "strong similarity to N.crassa mitochondrial ribosomal protein S24" ytydl181w - 2,99,0,0 "INH1" "inhibitor of mitochondrial ATPase" 40,16,0,0 "INH1" "inhibitor of mitochondrial ATPase" ytylr038c 2,13,0,0 "COX12" "cytochrome-c oxidase, subunit VIB" 40,16,0,0 "COX12" "cytochrome-c oxidase, subunit VIB" 6,10,0,0 "COX12" "cytochrome-c oxidase, subunit VIB" ytyhr051w 2,13,0,0 "COX6" "cytochrome-c oxidase subunit VI" 40,16,0,0 "COX6" "cytochrome-c oxidase subunit VI" ytypr020w 2,13,0,0 "ATP20" "subunit G of the dimeric form of mitochondrial F1F0-ATP Synthase" 40,16,0,0 "ATP20" "subunit G of the dimeric form of mitochondrial F1F0-ATP Synthase" Propertest Accuracy: 7/11 (63.64%) Propertest Frequency class '2/13/0/0': 29/1299 (2.23%) New (unknown) data (854 items): ytyor289w - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein" ytyor215c - 99,0,0,0 "null" "similarity to M.xanthus hypothetical protein" ytykl155c - 99,0,0,0 "RSM22" "similarity to S. pombe SPAC1420.04c putative cytochrome c oxidase assembly protein" ytyjr080c - 99,0,0,0 "null" "hypothetical protein" ytyor121c - 99,0,0,0 "null" "questionable ORF" ytyel057c - 99,0,0,0 "null" "hypothetical protein" ytybr051w - 99,0,0,0 "null" "questionable ORF" ytylr346c - 99,0,0,0 "null" "weak similarity to YGR035c" ytylr156w - 99,0,0,0 "null" "identical to hypothetical proteins YLR161w and YLR159w" ytypl099c - 99,0,0,0 "null" "weak similarity to Sulfolobus hypothetical protein" ------------------ Rule 880: eval(_1,_2,gte1.1),classification(_2,eukaryota),db_ref(_2,pfam) = 1 eval(_1,_2,b4.5e-2_1.1),classification(_2,glycine),db_ref(_2,hssp) = 0 eval(_1,_2,b0.0_1.0e-8),keyword(_2,inner_membrane),db_ref(_2,prints) = 0 cechdeeigagasp_gasch1_Heat_Shock_000_minutes__hs_2 <= 0.97 cechdeeigagasp_gasch1_Nitrogen_Depletion_4_h > 0.92 cechdeeigagasp_gasch2_DES459_mec1___mock_irradiation___60_min <= 0.379 eval(_1,_2,gte1.1),classification(_2,onygenales) = 0 eval(_1,_2,b4.0e-4_4.5e-2),sq_len(_2,b662_970),classification(_2,aspergillus) = 0 cechdeeigagasp_gasch1_1_mM_Menadione_105_min_redo <= 2.28 eval(_1,_2,b1.0e-8_4.0e-4),classification(_2,volvocales),db_ref(_2,hssp) = 0 -> class 1/1/0/0 "amino acid metabolism" Evaluation on training data (1648 items): ytyol064c 1,1,1,0 "MET22" "protein ser/thr phosphatase" 11,1,0,0 "MET22" "protein ser/thr phosphatase" ytygr207c - 2,13,0,0 "ETF-BETA" "electron-transferring flavoprotein, beta chain" 2,25,0,0 "ETF-BETA" "electron-transferring flavoprotein, beta chain" 40,16,0,0 "ETF-BETA" "electron-transferring flavoprotein, beta chain" ytybr248c 1,1,1,0 "HIS7" "glutamine amidotransferase/cyclase" ytygl125w 1,1,1,0 "MET13" "putative methylene tetrahydrofolate reductase" 1,7,1,0 "MET13" "putative methylene tetrahydrofolate reductase" 40,16,0,0 "MET13" "putative methylene tetrahydrofolate reductase" 5,1,0,0 "MET13" "putative methylene tetrahydrofolate reductase" ytynl015w - 40,3,0,0 "PBI2" "proteinase B inhibitor 2" 6,13,0,0 "PBI2" "proteinase B inhibitor 2" ytynr050c 1,1,1,0 "LYS9" "saccharopine dehydrogenase (NADP+, L-glutamate forming)" 40,3,0,0 "LYS9" "saccharopine dehydrogenase (NADP+, L-glutamate forming)" ytylr142w 1,1,1,0 "PUT1" "proline oxidase" 1,1,10,0 "PUT1" "proline oxidase" 40,16,0,0 "PUT1" "proline oxidase" ytyhr208w 1,1,1,0 "BAT1" "branched chain amino acid aminotransferase, mitochondrial" 1,1,10,0 "BAT1" "branched chain amino acid aminotransferase, mitochondrial" 3,3,1,0 "BAT1" "branched chain amino acid aminotransferase, mitochondrial" 40,16,0,0 "BAT1" "branched chain amino acid aminotransferase, mitochondrial" ytylr160c 1,1,10,0 "ASP3D" "L-asparaginase II" 40,1,0,0 "ASP3D" "L-asparaginase II" ytypr167c 1,1,1,0 "MET16" "3'-phosphoadenylylsulfate reductase" 1,2,1,0 "MET16" "3'-phosphoadenylylsulfate reductase" ytyjl172w - 1,2,1,0 "CPS1" "Gly-X carboxypeptidase YSCS precursor" 40,25,0,0 "CPS1" "Gly-X carboxypeptidase YSCS precursor" 6,13,4,0 "CPS1" "Gly-X carboxypeptidase YSCS precursor" ytycl030c 1,1,1,0 "HIS4" "phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase/histidinol dehydrogenase" ytypr035w 1,1,1,0 "GLN1" "glutamate--ammonia ligase" 1,2,1,0 "GLN1" "glutamate--ammonia ligase" 40,3,0,0 "GLN1" "glutamate--ammonia ligase" ytybl098w 1,1,10,0 "null" "similarity to human and D.melanogaster kynurenine 3-monooxygenase" 1,7,1,0 "null" "similarity to human and D.melanogaster kynurenine 3-monooxygenase" ytyjl200c - 2,10,0,0 "null" "strong similarity to aconitate hydratase" ytyal062w 1,1,10,1 "GDH3" "NADP-glutamate dehydrogenase" 1,2,1,0 "GDH3" "NADP-glutamate dehydrogenase" 30,1,0,0 "GDH3" "NADP-glutamate dehydrogenase" ytyer069w 1,1,1,0 "ARG5,6" "acetylglutamate kinase and acetylglutamyl-phosphate reductase" 40,16,0,0 "ARG5,6" "acetylglutamate kinase and acetylglutamyl-phosphate reductase" ytydr019c 1,1,10,0 "GCV1" "glycine decarboxylase, subunit T" 40,16,0,0 "GCV1" "glycine decarboxylase, subunit T" ytykl001c 1,1,1,0 "MET14" "ATP adenosine-5'-phosphosulfate 3'-phosphotransferase" 1,2,1,0 "MET14" "ATP adenosine-5'-phosphosulfate 3'-phosphotransferase" ytymr189w 1,1,10,0 "GCV2" "glycine decarboxylase P subunit" 40,16,0,0 "GCV2" "glycine decarboxylase P subunit" ytydl131w 1,1,1,0 "LYS21" "homocitrate synthase" 1,5,1,0 "LYS21" "homocitrate synthase" 40,10,0,0 "LYS21" "homocitrate synthase" ytylr155c 1,1,10,0 "ASP3A" "L-asparaginase II" 40,1,0,0 "ASP3A" "L-asparaginase II" ytyor375c 1,1,10,0 "GDH1" "glutamate dehydrogenase (NADP+)" 1,2,1,0 "GDH1" "glutamate dehydrogenase (NADP+)" 40,3,0,0 "GDH1" "glutamate dehydrogenase (NADP+)" ytyor202w 1,1,1,0 "HIS3" "imidazoleglycerol-phosphate dehydratase" 40,3,0,0 "HIS3" "imidazoleglycerol-phosphate dehydratase" ytydr234w 1,1,1,7 "LYS4" "homoaconitase" 40,16,0,0 "LYS4" "homoaconitase" ytyjr010w 1,1,1,0 "MET3" "sulfate adenylyltransferase" 1,2,1,0 "MET3" "sulfate adenylyltransferase" ytydr253c 1,1,4,0 "MET32" "transcriptional regulator of sulfur amino acid metabolism" 1,2,4,0 "MET32" "transcriptional regulator of sulfur amino acid metabolism" 4,5,1,4 "MET32" "transcriptional regulator of sulfur amino acid metabolism" Training Accuracy: 23/27 (85.19%) Training Frequency class '1/1/0/0': 88/1648 (5.34%) Evaluation on validation data (854 items): ytyol058w 1,1,1,0 "ARG1" "argininosuccinate synthetase" 1,2,1,0 "ARG1" "argininosuccinate synthetase" 40,3,0,0 "ARG1" "argininosuccinate synthetase" ytynl277w 1,1,1,0 "MET2" "homoserine O-acetyltransferase" 40,3,0,0 "MET2" "homoserine O-acetyltransferase" ytynl031c - 4,5,1,4 "HHT2" "histone H3" 40,10,3,0 "HHT2" "histone H3" ytyjr025c 1,1,10,0 "BNA1" "3-hydroxyanthranilic acid dioxygenase" 1,7,1,0 "BNA1" "3-hydroxyanthranilic acid dioxygenase" ytyhr112c 1,1,1,0 "null" "similarity to cystathionine gamma-synthases" ytyel071w - 2,99,0,0 "DLD3" "D-lactate dehydrogenase" 40,3,0,0 "DLD3" "D-lactate dehydrogenase" ytygr244c - 1,5,1,0 "LSC2" "succinate-CoA ligase beta subunit" 2,10,0,0 "LSC2" "succinate-CoA ligase beta subunit" ytydr113c - 3,3,1,3 "PDS1" "cell cycle regulator" 40,10,0,0 "PDS1" "cell cycle regulator" ytycl067c - 14,4,3,3 "HMLALPHA2" "mating type regulatory protein, silenced copy at HML" 40,10,0,0 "HMLALPHA2" "mating type regulatory protein, silenced copy at HML" ytyil094c 1,1,1,0 "LYS12" "homo-isocitrate dehydrogenase" ytycr096c - 14,4,3,3 "A2" "mating type regulatory protein, silenced copy at HMR locus" 40,10,0,0 "A2" "mating type regulatory protein, silenced copy at HMR locus" ytyir030c - 1,2,4,0 "DCG1" "involved in nitrogen-catabolite metabolism" 30,1,0,0 "DCG1" "involved in nitrogen-catabolite metabolism" ytyir031c - 1,3,1,0 "DAL7" "malate synthase 2" 1,5,1,0 "DAL7" "malate synthase 2" 2,99,0,0 "DAL7" "malate synthase 2" 40,19,0,0 "DAL7" "malate synthase 2" ytydr399w - 1,3,1,0 "HPT1" "hypoxanthine guanine phosphoribosyl transferase" ytydl059c - 3,1,5,0 "RAD59" "recombination and DNA repair protein" 40,10,0,0 "RAD59" "recombination and DNA repair protein" ytyor303w 1,1,1,0 "CPA1" "arginine-specific carbamoylphosphate synthase, small chain" 40,3,0,0 "CPA1" "arginine-specific carbamoylphosphate synthase, small chain" ytylr179c - 3,3,1,0 "null" "similarity to TFS1P" ytyil116w 1,1,1,0 "HIS5" "histidinol-phosphate aminotransferase" Validation Accuracy: 7/18 (38.89%) Validation Frequency class '1/1/0/0': 46/854 (5.39%) Evaluation on propertest data (1299 items): ytyjl088w 1,1,1,0 "ARG3" "ornithine carbamoyltransferase" 40,3,0,0 "ARG3" "ornithine carbamoyltransferase" ytydl174c - 1,5,1,0 "DLD1" "D-lactate ferricytochrome C oxidoreductase (D-LCR)" 2,16,0,0 "DLD1" "D-lactate ferricytochrome C oxidoreductase (D-LCR)" 40,16,0,0 "DLD1" "D-lactate ferricytochrome C oxidoreductase (D-LCR)" ytyor244w - 3,1,9,5 "ESA1" "histone acetyltransferase" 6,7,0,0 "ESA1" "histone acetyltransferase" ytybr010w - 4,5,1,4 "HHT1" "histone H3" 40,10,3,0 "HHT1" "histone H3" ytygl062w - 1,5,1,0 "PYC1" "pyruvate carboxylase 1" 2,1,0,0 "PYC1" "pyruvate carboxylase 1" 40,3,0,0 "PYC1" "pyruvate carboxylase 1" ytykr069w - 1,7,1,0 "MET1" "siroheme synthase" ytymr096w - 11,1,0,0 "SNZ1" "stationary phase protein" 3,99,0,0 "SNZ1" "stationary phase protein" ytylr299w 1,1,4,0 "ECM38" "gamma-glutamyltransferase, involved in glutathione synthesis" 3,3,1,0 "ECM38" "gamma-glutamyltransferase, involved in glutathione synthesis" 30,1,0,0 "ECM38" "gamma-glutamyltransferase, involved in glutathione synthesis" ytynl117w - 1,5,1,0 "MLS1" "malate synthase 1" 2,22,0,0 "MLS1" "malate synthase 1" 40,19,0,0 "MLS1" "malate synthase 1" ytylr303w 1,1,1,0 "MET17" "O-acetylhomoserine sulfhydrylase" 40,3,0,0 "MET17" "O-acetylhomoserine sulfhydrylase" ytygl184c 1,1,1,0 "STR3" "strong similarity to Emericella nidulans and similarity to other cystathionine beta-lyase and CYS3P" ytyir027c - 1,2,1,0 "DAL1" "allantoinase" 1,3,1,0 "DAL1" "allantoinase" ytymr062c 1,1,1,0 "ECM40" "acetylornithine acetyltransferase" 40,16,0,0 "ECM40" "acetylornithine acetyltransferase" ytycl018w 1,1,1,0 "LEU2" "beta-isopropyl-malate dehydrogenase" 40,3,0,0 "LEU2" "beta-isopropyl-malate dehydrogenase" ytydr502c 1,1,10,0 "SAM2" "S-adenosylmethionine synthetase 2" ytyer061c - 1,6,1,0 "CEM1" "beta-keto-acyl-ACP synthase, mitochondrial" 2,13,0,0 "CEM1" "beta-keto-acyl-ACP synthase, mitochondrial" 40,16,0,0 "CEM1" "beta-keto-acyl-ACP synthase, mitochondrial" ytyhr018c 1,1,1,0 "ARG4" "arginosuccinate lyase" 40,3,0,0 "ARG4" "arginosuccinate lyase" ytyfl021w - 1,2,4,0 "GAT1" "transcription factor for nitrogen regulation" 4,5,1,4 "GAT1" "transcription factor for nitrogen regulation" 40,10,0,0 "GAT1" "transcription factor for nitrogen regulation" ytygl234w - 1,3,1,0 "ADE5,7" "phosphoribosylamine-glycine ligase and phosphoribosylformylglycinamidine cyclo-ligase" ytybr009c - 4,5,1,4 "HHF1" "histone H4" 40,10,3,0 "HHF1" "histone H4" ytypr057w - 4,5,5,1 "BRR1" "involved in snRNP biogenesis" 40,10,0,0 "BRR1" "involved in snRNP biogenesis" ytynl220w - 1,3,1,0 "ADE12" "adenylosuccinate synthetase" 40,10,0,0 "ADE12" "adenylosuccinate synthetase" ytyjl060w - 1,2,1,0 "null" "similarity to kynurenine aminotransferase and glutamine-phenylpyruvate transaminase" ytylr157c 1,1,10,0 "ASP3B" "L-asparaginase II" 40,1,0,0 "ASP3B" "L-asparaginase II" ytylr158c 1,1,10,0 "ASP3C" "L-asparaginase II" 40,1,0,0 "ASP3C" "L-asparaginase II" ytyir034c 1,1,1,0 "LYS1" "saccharopine dehydrogenase" 40,3,0,0 "LYS1" "saccharopine dehydrogenase" ytygl009c 1,1,1,0 "LEU1" "3-isopropylmalate dehydratase" 40,3,0,0 "LEU1" "3-isopropylmalate dehydratase" ytyol140w 1,1,1,0 "ARG8" "acetylornithine aminotransferase" 40,16,0,0 "ARG8" "acetylornithine aminotransferase" Propertest Accuracy: 13/28 (46.43%) Propertest Frequency class '1/1/0/0': 70/1299 (5.39%) New (unknown) data (854 items): ytymr097c - 99,0,0,0 "null" "weak similarity to M.genitalium hypothetical protein homolog MG442" ytymr195w - 99,0,0,0 "ICY1" "similarity to ICY2" ytykr033c - 99,0,0,0 "null" "questionable ORF" ytyir042c - 99,0,0,0 "null" "weak similarity to B.licheniformi hypothetical protein P20" ytylr364w - 99,0,0,0 "null" "weak similarity to GRX2 Homo sapiens glutaredoxin 2" ytyol106w - 99,0,0,0 "null" "questionable ORF - identified by SAGE" ytymr077c - 98,0,0,0 "VPS20" "similarity to SNF7 protein" ytyer175c - 99,0,0,0 "TMT1" "similarity to hypothetical protein YHR209w" ytydr340w - 99,0,0,0 "null" "questionable ORF" ytydr281c - 99,0,0,0 "PHM6" "hypothetical protein, has a role in phosphate metabolism" ytypl054w - 99,0,0,0 "LEE1" "similarity to S. pombe scp3/SPAC3A11.02 spindle poison sensitivity related protein" ytypr002w - 99,0,0,0 "PDH1" "similarity to B.subtilis mmgE protein" ------------------ Rule 956: cechdeeigagasp_gasch1_DBYmsn2/4_real_strain_Plus_0point32_mM_H2O2_20_min > -1.09 eval(_1,_2,b0.0_1.0e-8),classification(_2,lactobacillus),db_ref(_2,interpro) = 0 cechdeeigagasp_gasch1_Heat_Shock_000_minutes__hs_2 > 0.97 cechdeeigagasp_gasch1_constant_0point32_mM_H2O2_120_min_redo > -0.56 cechdeeigagasp_gasch2_wt_plus_gamma_30_min <= -0.228 -> class 40/3/0/0 "cytoplasm" Evaluation on training data (1648 items): ytyer131w 40,3,0,0 "RPS26B" "40S small subunit ribosomal protein S26e-c5" 5,1,0,0 "RPS26B" "40S small subunit ribosomal protein S26e-c5" ytyer117w 40,3,0,0 "RPL23B" "ribosomal protein L23.e" 5,1,0,0 "RPL23B" "ribosomal protein L23.e" ytyil052c 40,3,0,0 "RPL34B" "ribosomal protein L34.e" 5,1,0,0 "RPL34B" "ribosomal protein L34.e" ytybr181c 40,3,0,0 "RPS6B" "ribosomal protein S6.e" 5,1,0,0 "RPS6B" "ribosomal protein S6.e" ytyil133c 40,3,0,0 "RPL16A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL16A" "60S large subunit ribosomal protein" ytybr249c 1,1,1,0 "ARO4" "2-dehydro-3-deoxyphosphoheptonate aldolase, tyrosine-inhibited" 40,3,0,0 "ARO4" "2-dehydro-3-deoxyphosphoheptonate aldolase, tyrosine-inhibited" ytyhr021c 40,3,0,0 "RPS27B" "ribosomal protein S27.e" 5,1,0,0 "RPS27B" "ribosomal protein S27.e" ytybl087c 40,3,0,0 "RPL23A" "60S large subunit ribosomal protein L23.e" 5,1,0,0 "RPL23A" "60S large subunit ribosomal protein L23.e" ytykl081w 40,3,0,0 "TEF4" "translation elongation factor eEF1, gamma chain" 5,4,0,0 "TEF4" "translation elongation factor eEF1, gamma chain" ytyor182c 40,3,0,0 "RPS30B" "ribosomal protein S30" 5,1,0,0 "RPS30B" "ribosomal protein S30" ytygr148c 40,3,0,0 "RPL24B" "60S large subunit ribosomal protein L24.e.B" 5,1,0,0 "RPL24B" "60S large subunit ribosomal protein L24.e.B" ytydr450w 40,3,0,0 "RPS18A" "ribosomal protein S18.e.c4" 5,1,0,0 "RPS18A" "ribosomal protein S18.e.c4" ytylr029c 40,3,0,0 "RPL15A" "60s large subunit ribosomal protein L15.e.c12" 5,1,0,0 "RPL15A" "60s large subunit ribosomal protein L15.e.c12" ytygl147c 40,3,0,0 "RPL9A" "ribosomal protein L9.e" 5,1,0,0 "RPL9A" "ribosomal protein L9.e" ytybr189w 40,3,0,0 "RPS9B" "ribosomal protein S9.e.B" 5,1,0,0 "RPS9B" "ribosomal protein S9.e.B" ytygl148w 1,1,1,0 "ARO2" "chorismate synthase" 40,3,0,0 "ARO2" "chorismate synthase" ytybr031w 40,3,0,0 "RPL4A" "ribosomal protein" 5,1,0,0 "RPL4A" "ribosomal protein" ytykl180w 40,3,0,0 "RPL17A" "ribosomal protein L17.e" 5,1,0,0 "RPL17A" "ribosomal protein L17.e" ytylr061w - 5,1,0,0 "RPL22A" "ribosomal protein" ytylr048w 40,3,0,0 "RPS0B" "40S ribosomal protein p40 homolog B" 5,1,0,0 "RPS0B" "40S ribosomal protein p40 homolog B" 6,10,0,0 "RPS0B" "40S ribosomal protein p40 homolog B" ytyhr141c 40,3,0,0 "RPL42B" "ribosomal protein L36a.e" 5,1,0,0 "RPL42B" "ribosomal protein L36a.e" ytydr300c 1,1,1,0 "PRO1" "glutamate 5-kinase" 40,3,0,0 "PRO1" "glutamate 5-kinase" ytyor369c 40,3,0,0 "RPS12" "40S small subunit acidic ribosomal protein S12" 5,1,0,0 "RPS12" "40S small subunit acidic ribosomal protein S12" ytydr064w 40,3,0,0 "RPS13" "ribosomal protein" 5,1,0,0 "RPS13" "ribosomal protein" ytylr340w 40,3,0,0 "RPP0" "acidic ribosomal protein L10.e" 5,1,0,0 "RPP0" "acidic ribosomal protein L10.e" ytylr180w - 1,1,1,0 "SAM1" "S-adenosylmethionine synthetase 1" 1,1,10,0 "SAM1" "S-adenosylmethionine synthetase 1" ytylr167w 40,3,0,0 "RPS31" "ubiquitin/40S small subunit ribosomal protein" 5,1,0,0 "RPS31" "ubiquitin/40S small subunit ribosomal protein" 6,13,1,0 "RPS31" "ubiquitin/40S small subunit ribosomal protein" ytygl030w 40,3,0,0 "RPL30" "60S large subunit ribosomal protein L30.e" 5,1,0,0 "RPL30" "60S large subunit ribosomal protein L30.e" ytyer025w 40,3,0,0 "GCD11" "translation initiation factor eIF2 gamma chain" 5,4,0,0 "GCD11" "translation initiation factor eIF2 gamma chain" ytylr249w 30,1,0,0 "YEF3" "translation elongation factor eEF3" 40,3,0,0 "YEF3" "translation elongation factor eEF3" 5,4,0,0 "YEF3" "translation elongation factor eEF3" ytylr344w 40,3,0,0 "RPL26A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL26A" "60S large subunit ribosomal protein" ytydr500c 40,3,0,0 "RPL37B" "ribosomal protein L.37.e" 5,1,0,0 "RPL37B" "ribosomal protein L.37.e" ytyor312c 40,3,0,0 "RPL20B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL20B" "60S large subunit ribosomal protein" ytynl178w 40,3,0,0 "RPS3" "ribosomal protein S3.e" 5,1,0,0 "RPS3" "ribosomal protein S3.e" ytyhr010w 40,3,0,0 "RPL27A" "60S large subunit ribosomal protein L27.e" 5,1,0,0 "RPL27A" "60S large subunit ribosomal protein L27.e" ytyor234c - 5,1,0,0 "RPL33B" "ribosomal protein L35a.e.c15" ytygr214w 14,4,3,1 "RPS0A" "40S ribosomal protein p40 homolog A" 40,3,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" 5,1,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" 6,10,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" ytykr057w 40,3,0,0 "RPS21A" "ribosomal protein S21.e" 5,1,0,0 "RPS21A" "ribosomal protein S21.e" ytyjl177w 40,3,0,0 "RPL17B" "60s large subunit ribosomal protein L17.e" 5,1,0,0 "RPL17B" "60s large subunit ribosomal protein L17.e" ytybl092w 40,3,0,0 "RPL32" "60S large subunit ribosomal protein L32.e" 5,1,0,0 "RPL32" "60S large subunit ribosomal protein L32.e" ytybr191w 40,3,0,0 "RPL21A" "ribosomal protein L21.e" 5,1,0,0 "RPL21A" "ribosomal protein L21.e" ytydr280w - 4,1,4,0 "RRP45" "rRNA processing protein" ytylr448w 40,3,0,0 "RPL6B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL6B" "60S large subunit ribosomal protein" ytygr234w 11,1,0,0 "YHB1" "flavohemoglobin" 40,3,0,0 "YHB1" "flavohemoglobin" ytypr132w 40,3,0,0 "RPS23B" "40S small subunit ribosomal protein S23.e" 5,1,0,0 "RPS23B" "40S small subunit ribosomal protein S23.e" ytyhl015w 40,3,0,0 "RPS20" "ribosomal protein" 5,1,0,0 "RPS20" "ribosomal protein" ytypl131w 40,3,0,0 "RPL5" "60S large subunit ribosomal protein L5.e" 5,1,0,0 "RPL5" "60S large subunit ribosomal protein L5.e" ytyil148w 40,3,0,0 "RPL40A" "ubiquitin" 5,1,0,0 "RPL40A" "ubiquitin" 6,13,1,0 "RPL40A" "ubiquitin" ytyjr123w 40,3,0,0 "RPS5" "ribosomal protein S5.e" 5,1,0,0 "RPS5" "ribosomal protein S5.e" ytydr447c 40,3,0,0 "RPS17B" "ribosomal protein S17.e.B" 5,1,0,0 "RPS17B" "ribosomal protein S17.e.B" ytygl076c 40,3,0,0 "RPL7A" "60S large subunit ribosomal protein L7.e.A" 5,1,0,0 "RPL7A" "60S large subunit ribosomal protein L7.e.A" ytynl301c 40,3,0,0 "RPL18B" "60S large subunit ribosomal protein L18.e" 5,1,0,0 "RPL18B" "60S large subunit ribosomal protein L18.e" ytynl062c 4,3,3,0 "GCD10" "translation initiation factor eIF3 RNA-binding subunit" 40,3,0,0 "GCD10" "translation initiation factor eIF3 RNA-binding subunit" 5,4,0,0 "GCD10" "translation initiation factor eIF3 RNA-binding subunit" ytyor276w 40,3,0,0 "CAF20" "mRNA CAP-binding protein (eIF4F), 20K subunit" 5,4,0,0 "CAF20" "mRNA CAP-binding protein (eIF4F), 20K subunit" ytyir012w 40,3,0,0 "SQT1" "suppresses dominant-negative mutants of the ribosomal protein QSR1" 6,10,0,0 "SQT1" "suppresses dominant-negative mutants of the ribosomal protein QSR1" ytyor293w 40,3,0,0 "RPS10A" "ribosomal protein S10.e" 5,1,0,0 "RPS10A" "ribosomal protein S10.e" ytynl067w 40,3,0,0 "RPL9B" "ribosomal protein L9.e.c14" 5,1,0,0 "RPL9B" "ribosomal protein L9.e.c14" ytyol120c 40,3,0,0 "RPL18A" "60S large subunit ribosomal protein S18.e" 5,1,0,0 "RPL18A" "60S large subunit ribosomal protein S18.e" ytymr116c 2,16,0,0 "ASC1" "40S small subunit ribosomal protein" 40,3,0,0 "ASC1" "40S small subunit ribosomal protein" 5,1,0,0 "ASC1" "40S small subunit ribosomal protein" 5,4,0,0 "ASC1" "40S small subunit ribosomal protein" ytyil018w 40,3,0,0 "RPL2B" "60S large subunit ribosomal protein L8.e" 5,1,0,0 "RPL2B" "60S large subunit ribosomal protein L8.e" Training Accuracy: 56/60 (93.33%) Training Frequency class '40/3/0/0': 242/1648 (14.68%) Evaluation on validation data (854 items): ytyjl190c 40,3,0,0 "RPS22A" "ribosomal protein S15a.e.c10" 5,1,0,0 "RPS22A" "ribosomal protein S15a.e.c10" ytyhl001w 40,3,0,0 "RPL14B" "ribosomal protein" 5,1,0,0 "RPL14B" "ribosomal protein" ytyjr007w 40,3,0,0 "SUI2" "translation initiation factor eIF2, alpha chain" 5,4,0,0 "SUI2" "translation initiation factor eIF2, alpha chain" ytydr012w 40,3,0,0 "RPL4B" "ribosomal protein L4.e.B" 5,1,0,0 "RPL4B" "ribosomal protein L4.e.B" ytyel054c 40,3,0,0 "RPL12A" "60S large subunit ribosomal protein L12.e" 5,1,0,0 "RPL12A" "60S large subunit ribosomal protein L12.e" ytyol149w - 4,5,5,0 "DCP1" "mRNA decapping enzyme" ytyjl189w 40,3,0,0 "RPL39" "60S large subunit ribosomal protein L39.e" 5,1,0,0 "RPL39" "60S large subunit ribosomal protein L39.e" ytyor096w 40,3,0,0 "RPS7A" "ribosomal protein" 5,1,0,0 "RPS7A" "ribosomal protein" ytyhr203c 40,3,0,0 "RPS4B" "ribosomal protein S4.e.c8" 5,1,0,0 "RPS4B" "ribosomal protein S4.e.c8" ytyhl033c 40,3,0,0 "RPL8A" "60S large subunit ribosomal protein L7a.e.A" 5,1,0,0 "RPL8A" "60S large subunit ribosomal protein L7a.e.A" ytylr388w 40,3,0,0 "RPS29A" "ribosomal protein S29.e.A" 5,1,0,0 "RPS29A" "ribosomal protein S29.e.A" ytyer165w 4,5,5,0 "PAB1" "mRNA polyadenylate-binding protein" 40,10,0,0 "PAB1" "mRNA polyadenylate-binding protein" 40,3,0,0 "PAB1" "mRNA polyadenylate-binding protein" 5,4,0,0 "PAB1" "mRNA polyadenylate-binding protein" ytyhr062c - 4,1,4,0 "RPP1" "required for processing of tRNA and 35S rRNA" 4,3,3,0 "RPP1" "required for processing of tRNA and 35S rRNA" 40,10,0,0 "RPP1" "required for processing of tRNA and 35S rRNA" ytyjr145c 40,3,0,0 "RPS4A" "ribosomal protein S4.e.c10" 5,1,0,0 "RPS4A" "ribosomal protein S4.e.c10" ytylr075w 3,3,1,0 "RPL10" "60S large subunit ribosomal protein" 40,3,0,0 "RPL10" "60S large subunit ribosomal protein" 5,1,0,0 "RPL10" "60S large subunit ribosomal protein" 6,10,0,0 "RPL10" "60S large subunit ribosomal protein" ytynl162w 40,3,0,0 "RPL42A" "ribosomal protein L36a.e" 5,1,0,0 "RPL42A" "ribosomal protein L36a.e" ytybr143c 40,3,0,0 "SUP45" "translational release factor" 5,4,0,0 "SUP45" "translational release factor" ytylr325c 40,3,0,0 "RPL38" "60S large subunit ribosomal protein" 5,1,0,0 "RPL38" "60S large subunit ribosomal protein" ytyol121c 40,3,0,0 "RPS19A" "40S small subunit ribosomal protein S19.e" 5,1,0,0 "RPS19A" "40S small subunit ribosomal protein S19.e" ytyer102w 40,3,0,0 "RPS8B" "ribosomal protein S8.e" 5,1,0,0 "RPS8B" "ribosomal protein S8.e" ytylr333c 40,3,0,0 "RPS25B" "ribosomal protein S25.e.c12" 5,1,0,0 "RPS25B" "ribosomal protein S25.e.c12" ytydl136w 40,3,0,0 "RPL35B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL35B" "60S large subunit ribosomal protein" ytygl103w 40,3,0,0 "RPL28" "60S large subunit ribosomal protein L27a.e" 5,1,0,0 "RPL28" "60S large subunit ribosomal protein L27a.e" ytypr102c 40,3,0,0 "RPL11A" "ribosomal protein L11.e" 5,1,0,0 "RPL11A" "ribosomal protein L11.e" ytycr034w - 1,5,1,0 "FEN1" "fatty acid elongase required for sphingolipid formation" 1,6,1,0 "FEN1" "fatty acid elongase required for sphingolipid formation" 14,1,0,0 "FEN1" "fatty acid elongase required for sphingolipid formation" 14,4,3,1 "FEN1" "fatty acid elongase required for sphingolipid formation" 14,4,3,3 "FEN1" "fatty acid elongase required for sphingolipid formation" 14,4,3,5 "FEN1" "fatty acid elongase required for sphingolipid formation" 40,2,0,0 "FEN1" "fatty acid elongase required for sphingolipid formation" ytylr441c 14,4,3,3 "RPS1A" "ribosomal protein S3a.e" 40,3,0,0 "RPS1A" "ribosomal protein S3a.e" 5,1,0,0 "RPS1A" "ribosomal protein S3a.e" Validation Accuracy: 23/26 (88.46%) Validation Frequency class '40/3/0/0': 114/854 (13.35%) Evaluation on propertest data (1299 items): ytygl123w 40,3,0,0 "RPS2" "40S small subunit ribosomal protein" 5,1,0,0 "RPS2" "40S small subunit ribosomal protein" ytyer055c - 1,1,1,0 "HIS1" "ATP phosphoribosyltransferase" 1,1,4,0 "HIS1" "ATP phosphoribosyltransferase" ytypl198w 40,3,0,0 "RPL7B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL7B" "60S large subunit ribosomal protein" ytyml073c 40,3,0,0 "RPL6A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL6A" "60S large subunit ribosomal protein" ytypr043w 40,3,0,0 "RPL43A" "ribosomal protein L37a.e" 5,1,0,0 "RPL43A" "ribosomal protein L37a.e" ytynl112w - 4,1,4,0 "DBP2" "ATP-dependent RNA helicase of DEAD box family" 40,10,0,0 "DBP2" "ATP-dependent RNA helicase of DEAD box family" ytyor167c 40,3,0,0 "RPS28A" "40S small subunit ribosomal protein S28.e.c15" 5,1,0,0 "RPS28A" "40S small subunit ribosomal protein S28.e.c15" ytygl225w - 40,8,0,0 "GOG5" "GDP-mannose transporter into the lumen of the Golgi" 67,7,0,0 "GOG5" "GDP-mannose transporter into the lumen of the Golgi" 8,7,0,0 "GOG5" "GDP-mannose transporter into the lumen of the Golgi" ytyer074w 40,3,0,0 "RPS24A" "40s small subunit ribosomal protein S24.e" 5,1,0,0 "RPS24A" "40s small subunit ribosomal protein S24.e" ytygr085c 40,3,0,0 "RPL11B" "ribosomal protein" 5,1,0,0 "RPL11B" "ribosomal protein" ytypl220w 40,3,0,0 "RPL1A" "ribosomal protein" 5,1,0,0 "RPL1A" "ribosomal protein" ytyll045c 40,3,0,0 "RPL8B" "60s large subunit ribosomal protein L7a.e.B" 5,1,0,0 "RPL8B" "60s large subunit ribosomal protein L7a.e.B" ytynl119w - 5,1,0,0 "null" "weak similarity to M.jannaschii hypothetical protein MJ1257" ytypl143w 40,3,0,0 "RPL33A" "ribosomal protein L35a.e.c16" 5,1,0,0 "RPL33A" "ribosomal protein L35a.e.c16" ytydr471w 40,3,0,0 "RPL27B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL27B" "60S large subunit ribosomal protein" ytynl151c - 4,1,1,0 "RPC31" "DNA-directed RNA polymerase III, 31 KD subunit" 4,3,1,0 "RPC31" "DNA-directed RNA polymerase III, 31 KD subunit" 40,10,0,0 "RPC31" "DNA-directed RNA polymerase III, 31 KD subunit" ytypr163c 40,3,0,0 "TIF3" "translation initiation factor eIF4B" 5,4,0,0 "TIF3" "translation initiation factor eIF4B" ytyjl136c 40,3,0,0 "RPS21B" "40S small subunit ribosomal protein S21.e" 5,1,0,0 "RPS21B" "40S small subunit ribosomal protein S21.e" ytyjl138c 40,3,0,0 "TIF2" "translation initiation factor eIF4A" 5,4,0,0 "TIF2" "translation initiation factor eIF4A" ytyor212w - 10,1,5,5 "STE4" "GTP-binding protein beta subunit of the pheromone pathway" 13,11,3,7 "STE4" "GTP-binding protein beta subunit of the pheromone pathway" 14,4,3,1 "STE4" "GTP-binding protein beta subunit of the pheromone pathway" 14,4,3,3 "STE4" "GTP-binding protein beta subunit of the pheromone pathway" 40,2,0,0 "STE4" "GTP-binding protein beta subunit of the pheromone pathway" ytygl031c 40,3,0,0 "RPL24A" "60S large subunit ribosomal protein L24.e.A" 5,1,0,0 "RPL24A" "60S large subunit ribosomal protein L24.e.A" ytygr034w 40,3,0,0 "RPL26B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL26B" "60S large subunit ribosomal protein" ytynl255c - 4,99,0,0 "GIS2" "strong similarity to nucleic acid-binding proteins, similarity to Tetrahymena thermophila cnjB protein" 5,1,0,0 "GIS2" "strong similarity to nucleic acid-binding proteins, similarity to Tetrahymena thermophila cnjB protein" ytybl072c 40,3,0,0 "RPS8A" "ribosomal protein S8.e" 5,1,0,0 "RPS8A" "ribosomal protein S8.e" ytylr185w 40,3,0,0 "RPL37A" "ribosomal protein L37.e" 5,1,0,0 "RPL37A" "ribosomal protein L37.e" ytygr118w 40,3,0,0 "RPS23A" "40S small subunit ribosomal protein S23.e" 5,1,0,0 "RPS23A" "40S small subunit ribosomal protein S23.e" ytyml063w 40,3,0,0 "RPS1B" "ribosomal protein S3a.e" 5,1,0,0 "RPS1B" "ribosomal protein S3a.e" ytymr242c 40,3,0,0 "RPL20A" "60s large subunit ribosomal protein" 5,1,0,0 "RPL20A" "60s large subunit ribosomal protein" ytykr059w 40,3,0,0 "TIF1" "translation initiation factor 4A" 5,4,0,0 "TIF1" "translation initiation factor 4A" ytygl135w 40,3,0,0 "RPL1B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL1B" "60S large subunit ribosomal protein" ytynl209w 40,3,0,0 "SSB2" "heat shock protein of HSP70 family, cytosolic" 5,99,0,0 "SSB2" "heat shock protein of HSP70 family, cytosolic" ytybl027w 40,3,0,0 "RPL19B" "60S large subunit ribosomal protein L19.e" 5,1,0,0 "RPL19B" "60S large subunit ribosomal protein L19.e" ytynl069c 40,3,0,0 "RPL16B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL16B" "60S large subunit ribosomal protein" ytybr048w 40,3,0,0 "RPS11B" "ribosomal protein S11.e.B" 5,1,0,0 "RPS11B" "ribosomal protein S11.e.B" ytygr027c 40,3,0,0 "RPS25A" "ribosomal protein S25.e.c7" 5,1,0,0 "RPS25A" "ribosomal protein S25.e.c7" ytyol127w 40,3,0,0 "RPL25" "ribosomal protein L23a.e" 5,1,0,0 "RPL25" "ribosomal protein L23a.e" Propertest Accuracy: 29/36 (80.56%) Propertest Frequency class '40/3/0/0': 195/1299 (15.01%) New (unknown) data (854 items): ytyil158w - 99,0,0,0 "null" "similarity to hypothetical protein YKR100c" ytyol077c - 99,0,0,0 "BRX1" "strong similarity to C.elegans K12H4.3 protein" ytypr118w - 99,0,0,0 "null" "similarity to M.jannaschii translation initiation factor, eIF-2B" ytyml018c - 99,0,0,0 "null" "similarity to YDR438w" ytygl102c - 99,0,0,0 "null" "questionable ORF" ytyjl069c - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein" ytydr430c - 99,0,0,0 "null" "similarity to C.perfringens hypothetical hypA protein" ytypl142c - 99,0,0,0 "null" "questionable ORF" ytymr305c - 98,0,0,0 "SCW10" "similarity to B.japonicum putative beta-(-6)glucan transferase" ytydl166c - 99,0,0,0 "null" "weak similarity to Pyrococcus horikoshii hypothetical protein PHBJ019" ytydr346c - 99,0,0,0 "null" "similarity to hypothetical S.pombe protein" ytynr046w - 99,0,0,0 "null" "strong similarity to S.pombe hypothetical protein SPAC31A2.02" ytygr079w - 99,0,0,0 "null" "hypothetical protein" ytylr413w - 99,0,0,0 "null" "strong similarity to YKL187c" ytyor145c - 99,0,0,0 "null" "strong similarity to hypothtical S. pombe protein and to hypothetical C. elegans protein" ------------------ Rule 782: eval(_1,_2,b0.0_1.0e-8),mol_wt(_2,b38502_53922),db_ref(_2,pfam) = 0 eval(_1,_2,b0.0_1.0e-8),sq_len(_2,b16_344),classification(_2,streptomycineae) = 1 cechdeeigagasp_gasch1_YP_fructose_vs_reference_pool_car_2 > -0.67 -> class 5/1/0/0 "ribosome biogenesis" Evaluation on training data (1648 items): ytyil133c 40,3,0,0 "RPL16A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL16A" "60S large subunit ribosomal protein" ytynr036c 5,1,0,0 "null" "strong similarity to ribosomal protein S12" ytydr450w 40,3,0,0 "RPS18A" "ribosomal protein S18.e.c4" 5,1,0,0 "RPS18A" "ribosomal protein S18.e.c4" ytygl147c 40,3,0,0 "RPL9A" "ribosomal protein L9.e" 5,1,0,0 "RPL9A" "ribosomal protein L9.e" ytymr193w 40,16,0,0 "MRPL24" "ribosomal protein of the large subunit, mitochondrial" 5,1,0,0 "MRPL24" "ribosomal protein of the large subunit, mitochondrial" ytydl202w 40,16,0,0 "MRPL11" "ribosomal protein of the large subunit, mitochondrial" 5,1,0,0 "MRPL11" "ribosomal protein of the large subunit, mitochondrial" ytyml009c 40,16,0,0 "MRPL39" "60S ribosomal protein, mitochondrial" 5,1,0,0 "MRPL39" "60S ribosomal protein, mitochondrial" ytyhr147c 40,16,0,0 "MRPL6" "ribosomal protein of the large subunit, mitochondrial" 5,1,0,0 "MRPL6" "ribosomal protein of the large subunit, mitochondrial" ytydr064w 40,3,0,0 "RPS13" "ribosomal protein" 5,1,0,0 "RPS13" "ribosomal protein" ytyml026c 40,3,0,0 "RPS18B" "ribosomal protein S18.e.c13" 5,1,0,0 "RPS18B" "ribosomal protein S18.e.c13" ytylr340w 40,3,0,0 "RPP0" "acidic ribosomal protein L10.e" 5,1,0,0 "RPP0" "acidic ribosomal protein L10.e" ytq0130 - 13,1,1,3 "OLI1" "F1F0-ATPase complex, F0 subunit 9" 2,13,0,0 "OLI1" "F1F0-ATPase complex, F0 subunit 9" 40,16,0,0 "OLI1" "F1F0-ATPase complex, F0 subunit 9" 67,50,22,0 "OLI1" "F1F0-ATPase complex, F0 subunit 9" 8,4,0,0 "OLI1" "F1F0-ATPase complex, F0 subunit 9" ytydr347w 40,16,0,0 "MRP1" "ribosomal protein of the small subunit, mitochondrial" 5,1,0,0 "MRP1" "ribosomal protein of the small subunit, mitochondrial" ytypr132w 40,3,0,0 "RPS23B" "40S small subunit ribosomal protein S23.e" 5,1,0,0 "RPS23B" "40S small subunit ribosomal protein S23.e" ytykl003c 40,16,0,0 "MRP17" "ribosomal protein of the small subunit, mitochondrial" 5,1,0,0 "MRP17" "ribosomal protein of the small subunit, mitochondrial" ytynl081c 5,1,0,0 "null" "similarity to ribosomal protein S13" ytynl067w 40,3,0,0 "RPL9B" "ribosomal protein L9.e.c14" 5,1,0,0 "RPL9B" "ribosomal protein L9.e.c14" ytykl009w 1,3,16,0 "MRT4" "mRNA turnover 4" 4,5,5,0 "MRT4" "mRNA turnover 4" 5,1,0,0 "MRT4" "mRNA turnover 4" ytyer050c 5,1,0,0 "RSM18" "component of the mitochondrial ribosomal small subunit" Training Accuracy: 18/19 (94.74%) Training Frequency class '5/1/0/0': 90/1648 (5.46%) Evaluation on validation data (854 items): ytyjl096w 40,16,0,0 "MRPL49" "ribosomal protein YmL49, mitochondrial" 5,1,0,0 "MRPL49" "ribosomal protein YmL49, mitochondrial" ytyel054c 40,3,0,0 "RPL12A" "60S large subunit ribosomal protein L12.e" 5,1,0,0 "RPL12A" "60S large subunit ribosomal protein L12.e" ytynr034w - 4,3,3,0 "SOL1" "multicopy suppressor of LOS1-1" ytygl154c - 1,1,1,0 "LYS5" "L-aminoadipate-semialdehyde dehydrogenase, small subunit" 40,3,0,0 "LYS5" "L-aminoadipate-semialdehyde dehydrogenase, small subunit" ytyor020c - 40,16,0,0 "HSP10" "chaperonin, mitochondrial" 6,4,0,0 "HSP10" "chaperonin, mitochondrial" ytynl306w 40,16,0,0 "MRPS18" "ribosomal protein of the small subunit, mitochondrial" 5,1,0,0 "MRPS18" "ribosomal protein of the small subunit, mitochondrial" ytypr166c 40,16,0,0 "MRP2" "ribosomal protein S14" 5,1,0,0 "MRP2" "ribosomal protein S14" ytyhr163w - 4,3,3,0 "SOL3" "possible 6-phosphogluconolactonase" ytygl103w 40,3,0,0 "RPL28" "60S large subunit ribosomal protein L27a.e" 5,1,0,0 "RPL28" "60S large subunit ribosomal protein L27a.e" ytyor150w 40,16,0,0 "MRPL23" "ribosomal protein of the large subunit, mitochondrial" 5,1,0,0 "MRPL23" "ribosomal protein of the large subunit, mitochondrial" ytynl256w - 1,7,1,0 "FOL1" "Dihydroneopterin aldolase, dihydro-6-hydroxymethylpterin pyrophosphokinase, dihydropteroate synthetase" ytylr179c - 3,3,1,0 "null" "similarity to TFS1P" Validation Accuracy: 6/12 (50.00%) Validation Frequency class '5/1/0/0': 42/854 (4.92%) Evaluation on propertest data (1299 items): ytycr046c 2,13,0,0 "IMG1" "ribosomal protein, mitochondrial" 40,16,0,0 "IMG1" "ribosomal protein, mitochondrial" 5,1,0,0 "IMG1" "ribosomal protein, mitochondrial" ytynl284c 40,16,0,0 "MRPL10" "ribosomal protein of the large subunit, mitochondrial" 5,1,0,0 "MRPL10" "ribosomal protein of the large subunit, mitochondrial" ytydr418w 40,3,0,0 "RPL12B" "60S large subunit ribosomal protein L12.e" 5,1,0,0 "RPL12B" "60S large subunit ribosomal protein L12.e" ytykl067w - 1,3,99,0 "YNK1" "nucleoside diphosphate kinase" 40,3,0,0 "YNK1" "nucleoside diphosphate kinase" ytypl220w 40,3,0,0 "RPL1A" "ribosomal protein" 5,1,0,0 "RPL1A" "ribosomal protein" ytynl072w - 1,3,16,0 "RNH35" "RNase H(35), a 35 kDa ribonuclease H" ytydr322w 40,16,0,0 "MRPL35" "ribosomal protein YmL35 of the large subunit, mitochondrial" 5,1,0,0 "MRPL35" "ribosomal protein YmL35 of the large subunit, mitochondrial" ytydl083c 40,3,0,0 "RPS16B" "ribosomal protein S16.e" 5,1,0,0 "RPS16B" "ribosomal protein S16.e" ytymr143w 40,3,0,0 "RPS16A" "ribosomal protein S16.e" 5,1,0,0 "RPS16A" "ribosomal protein S16.e" ytyjl191w 40,3,0,0 "RPS14B" "40S small subunit ribosomal protein S14.e.B" 5,1,0,0 "RPS14B" "40S small subunit ribosomal protein S14.e.B" ytygl135w 40,3,0,0 "RPL1B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL1B" "60S large subunit ribosomal protein" ytyil145c - 1,7,1,0 "PAN6" "protein required for synthesis of pantothenic acid" ytydr115w 5,1,0,0 "null" "similarity to bacterial ribosomal L34 proteins" ytydr050c - 1,5,1,0 "TPI1" "triose-phosphate isomerase" 2,1,0,0 "TPI1" "triose-phosphate isomerase" 40,3,0,0 "TPI1" "triose-phosphate isomerase" ytykl192c - 1,6,1,0 "ACP1" "mitochonrial acyl-carrier protein" 40,16,0,0 "ACP1" "mitochonrial acyl-carrier protein" 67,13,0,0 "ACP1" "mitochonrial acyl-carrier protein" ytymr286w 40,16,0,0 "MRPL33" "ribosomal protein of the large subunit, mitochondrial" 5,1,0,0 "MRPL33" "ribosomal protein of the large subunit, mitochondrial" ytynl069c 40,3,0,0 "RPL16B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL16B" "60S large subunit ribosomal protein" Propertest Accuracy: 12/17 (70.59%) Propertest Frequency class '5/1/0/0': 79/1299 (6.08%) New (unknown) data (854 items): ytydr391c - 99,0,0,0 "null" "strong similarity to hypothetical protein YOR013w" ytylr011w - 99,0,0,0 "LOT6" "weak similarity to E.coli hypothetical 20.4 kDa protein" ytypr073c - 98,0,0,0 "LTP1" "protein-tyrosine-phosphatase" ------------------ Rule 986: cechdeeigagasp_gasch1_Heat_Shock_000_minutes__hs_2 > 0.97 cechdeeigagasp_gasch1_constant_0point32_mM_H2O2_120_min_redo > -0.56 cechdeeigagasp_gasch1_DBYmsn2/4_real_strain_Plus_0point32_mM_H2O2_20_min > -1.09 cechdeeigagasp_gasch2_wt_plus_gamma_30_min <= -0.228 -> class 5/1/0/0 "ribosome biogenesis" Evaluation on training data (1648 items): ytyer131w 40,3,0,0 "RPS26B" "40S small subunit ribosomal protein S26e-c5" 5,1,0,0 "RPS26B" "40S small subunit ribosomal protein S26e-c5" ytyer117w 40,3,0,0 "RPL23B" "ribosomal protein L23.e" 5,1,0,0 "RPL23B" "ribosomal protein L23.e" ytyil052c 40,3,0,0 "RPL34B" "ribosomal protein L34.e" 5,1,0,0 "RPL34B" "ribosomal protein L34.e" ytybr181c 40,3,0,0 "RPS6B" "ribosomal protein S6.e" 5,1,0,0 "RPS6B" "ribosomal protein S6.e" ytyil133c 40,3,0,0 "RPL16A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL16A" "60S large subunit ribosomal protein" ytybr249c - 1,1,1,0 "ARO4" "2-dehydro-3-deoxyphosphoheptonate aldolase, tyrosine-inhibited" 40,3,0,0 "ARO4" "2-dehydro-3-deoxyphosphoheptonate aldolase, tyrosine-inhibited" ytyhr021c 40,3,0,0 "RPS27B" "ribosomal protein S27.e" 5,1,0,0 "RPS27B" "ribosomal protein S27.e" ytybl087c 40,3,0,0 "RPL23A" "60S large subunit ribosomal protein L23.e" 5,1,0,0 "RPL23A" "60S large subunit ribosomal protein L23.e" ytykl081w - 40,3,0,0 "TEF4" "translation elongation factor eEF1, gamma chain" 5,4,0,0 "TEF4" "translation elongation factor eEF1, gamma chain" ytyor182c 40,3,0,0 "RPS30B" "ribosomal protein S30" 5,1,0,0 "RPS30B" "ribosomal protein S30" ytygr148c 40,3,0,0 "RPL24B" "60S large subunit ribosomal protein L24.e.B" 5,1,0,0 "RPL24B" "60S large subunit ribosomal protein L24.e.B" ytydr450w 40,3,0,0 "RPS18A" "ribosomal protein S18.e.c4" 5,1,0,0 "RPS18A" "ribosomal protein S18.e.c4" ytylr029c 40,3,0,0 "RPL15A" "60s large subunit ribosomal protein L15.e.c12" 5,1,0,0 "RPL15A" "60s large subunit ribosomal protein L15.e.c12" ytygl147c 40,3,0,0 "RPL9A" "ribosomal protein L9.e" 5,1,0,0 "RPL9A" "ribosomal protein L9.e" ytybr189w 40,3,0,0 "RPS9B" "ribosomal protein S9.e.B" 5,1,0,0 "RPS9B" "ribosomal protein S9.e.B" ytygl148w - 1,1,1,0 "ARO2" "chorismate synthase" 40,3,0,0 "ARO2" "chorismate synthase" ytybr031w 40,3,0,0 "RPL4A" "ribosomal protein" 5,1,0,0 "RPL4A" "ribosomal protein" ytykl180w 40,3,0,0 "RPL17A" "ribosomal protein L17.e" 5,1,0,0 "RPL17A" "ribosomal protein L17.e" ytylr061w 5,1,0,0 "RPL22A" "ribosomal protein" ytykl181w - 1,1,1,0 "PRS1" "ribose-phosphate pyrophosphokinase" 1,3,1,0 "PRS1" "ribose-phosphate pyrophosphokinase" 1,3,4,0 "PRS1" "ribose-phosphate pyrophosphokinase" 14,4,3,1 "PRS1" "ribose-phosphate pyrophosphokinase" ytylr048w 40,3,0,0 "RPS0B" "40S ribosomal protein p40 homolog B" 5,1,0,0 "RPS0B" "40S ribosomal protein p40 homolog B" 6,10,0,0 "RPS0B" "40S ribosomal protein p40 homolog B" ytybr084c-a 40,3,0,0 "RPL19A" "60S large subunit ribosomal protein L19.e" 5,1,0,0 "RPL19A" "60S large subunit ribosomal protein L19.e" ytyhr141c 40,3,0,0 "RPL42B" "ribosomal protein L36a.e" 5,1,0,0 "RPL42B" "ribosomal protein L36a.e" ytydr300c - 1,1,1,0 "PRO1" "glutamate 5-kinase" 40,3,0,0 "PRO1" "glutamate 5-kinase" ytyer056c-a 40,3,0,0 "RPL34A" "ribosomal protein L34" 5,1,0,0 "RPL34A" "ribosomal protein L34" ytyml022w - 1,3,1,0 "APT1" "adenine phosphoribosyltransferase" ytyor369c 40,3,0,0 "RPS12" "40S small subunit acidic ribosomal protein S12" 5,1,0,0 "RPS12" "40S small subunit acidic ribosomal protein S12" ytydr064w 40,3,0,0 "RPS13" "ribosomal protein" 5,1,0,0 "RPS13" "ribosomal protein" ytylr340w 40,3,0,0 "RPP0" "acidic ribosomal protein L10.e" 5,1,0,0 "RPP0" "acidic ribosomal protein L10.e" ytylr180w - 1,1,1,0 "SAM1" "S-adenosylmethionine synthetase 1" 1,1,10,0 "SAM1" "S-adenosylmethionine synthetase 1" ytylr167w 40,3,0,0 "RPS31" "ubiquitin/40S small subunit ribosomal protein" 5,1,0,0 "RPS31" "ubiquitin/40S small subunit ribosomal protein" 6,13,1,0 "RPS31" "ubiquitin/40S small subunit ribosomal protein" ytygl030w 40,3,0,0 "RPL30" "60S large subunit ribosomal protein L30.e" 5,1,0,0 "RPL30" "60S large subunit ribosomal protein L30.e" ytyer025w - 40,3,0,0 "GCD11" "translation initiation factor eIF2 gamma chain" 5,4,0,0 "GCD11" "translation initiation factor eIF2 gamma chain" ytylr249w - 30,1,0,0 "YEF3" "translation elongation factor eEF3" 40,3,0,0 "YEF3" "translation elongation factor eEF3" 5,4,0,0 "YEF3" "translation elongation factor eEF3" ytylr344w 40,3,0,0 "RPL26A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL26A" "60S large subunit ribosomal protein" ytydr500c 40,3,0,0 "RPL37B" "ribosomal protein L.37.e" 5,1,0,0 "RPL37B" "ribosomal protein L.37.e" ytyor312c 40,3,0,0 "RPL20B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL20B" "60S large subunit ribosomal protein" ytynl178w 40,3,0,0 "RPS3" "ribosomal protein S3.e" 5,1,0,0 "RPS3" "ribosomal protein S3.e" ytyhr010w 40,3,0,0 "RPL27A" "60S large subunit ribosomal protein L27.e" 5,1,0,0 "RPL27A" "60S large subunit ribosomal protein L27.e" ytyor234c 5,1,0,0 "RPL33B" "ribosomal protein L35a.e.c15" ytygr214w 14,4,3,1 "RPS0A" "40S ribosomal protein p40 homolog A" 40,3,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" 5,1,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" 6,10,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" ytykr057w 40,3,0,0 "RPS21A" "ribosomal protein S21.e" 5,1,0,0 "RPS21A" "ribosomal protein S21.e" ytyjl177w 40,3,0,0 "RPL17B" "60s large subunit ribosomal protein L17.e" 5,1,0,0 "RPL17B" "60s large subunit ribosomal protein L17.e" ytybl092w 40,3,0,0 "RPL32" "60S large subunit ribosomal protein L32.e" 5,1,0,0 "RPL32" "60S large subunit ribosomal protein L32.e" ytyhl011c - 1,1,1,0 "PRS3" "ribose-phosphate pyrophosphokinase" 1,3,1,0 "PRS3" "ribose-phosphate pyrophosphokinase" 1,3,4,0 "PRS3" "ribose-phosphate pyrophosphokinase" ytyel046c - 1,1,1,0 "GLY1" "L-threonine aldolase, low-specific" 1,1,10,0 "GLY1" "L-threonine aldolase, low-specific" ytybr191w 40,3,0,0 "RPL21A" "ribosomal protein L21.e" 5,1,0,0 "RPL21A" "ribosomal protein L21.e" ytydr280w - 4,1,4,0 "RRP45" "rRNA processing protein" ytylr448w 40,3,0,0 "RPL6B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL6B" "60S large subunit ribosomal protein" ytygr234w - 11,1,0,0 "YHB1" "flavohemoglobin" 40,3,0,0 "YHB1" "flavohemoglobin" ytypr132w 40,3,0,0 "RPS23B" "40S small subunit ribosomal protein S23.e" 5,1,0,0 "RPS23B" "40S small subunit ribosomal protein S23.e" ytyhl015w 40,3,0,0 "RPS20" "ribosomal protein" 5,1,0,0 "RPS20" "ribosomal protein" ytyhr019c - 5,10,0,0 "DED81" "asparaginyl-tRNA-synthetase" ytypl131w 40,3,0,0 "RPL5" "60S large subunit ribosomal protein L5.e" 5,1,0,0 "RPL5" "60S large subunit ribosomal protein L5.e" ytyil148w 40,3,0,0 "RPL40A" "ubiquitin" 5,1,0,0 "RPL40A" "ubiquitin" 6,13,1,0 "RPL40A" "ubiquitin" ytyjr123w 40,3,0,0 "RPS5" "ribosomal protein S5.e" 5,1,0,0 "RPS5" "ribosomal protein S5.e" ytydr447c 40,3,0,0 "RPS17B" "ribosomal protein S17.e.B" 5,1,0,0 "RPS17B" "ribosomal protein S17.e.B" ytygl076c 40,3,0,0 "RPL7A" "60S large subunit ribosomal protein L7.e.A" 5,1,0,0 "RPL7A" "60S large subunit ribosomal protein L7.e.A" ytynl301c 40,3,0,0 "RPL18B" "60S large subunit ribosomal protein L18.e" 5,1,0,0 "RPL18B" "60S large subunit ribosomal protein L18.e" ytynl062c - 4,3,3,0 "GCD10" "translation initiation factor eIF3 RNA-binding subunit" 40,3,0,0 "GCD10" "translation initiation factor eIF3 RNA-binding subunit" 5,4,0,0 "GCD10" "translation initiation factor eIF3 RNA-binding subunit" ytyor276w - 40,3,0,0 "CAF20" "mRNA CAP-binding protein (eIF4F), 20K subunit" 5,4,0,0 "CAF20" "mRNA CAP-binding protein (eIF4F), 20K subunit" ytyir012w - 40,3,0,0 "SQT1" "suppresses dominant-negative mutants of the ribosomal protein QSR1" 6,10,0,0 "SQT1" "suppresses dominant-negative mutants of the ribosomal protein QSR1" ytyor293w 40,3,0,0 "RPS10A" "ribosomal protein S10.e" 5,1,0,0 "RPS10A" "ribosomal protein S10.e" ytynl067w 40,3,0,0 "RPL9B" "ribosomal protein L9.e.c14" 5,1,0,0 "RPL9B" "ribosomal protein L9.e.c14" ytyol120c 40,3,0,0 "RPL18A" "60S large subunit ribosomal protein S18.e" 5,1,0,0 "RPL18A" "60S large subunit ribosomal protein S18.e" ytymr116c 2,16,0,0 "ASC1" "40S small subunit ribosomal protein" 40,3,0,0 "ASC1" "40S small subunit ribosomal protein" 5,1,0,0 "ASC1" "40S small subunit ribosomal protein" 5,4,0,0 "ASC1" "40S small subunit ribosomal protein" ytyil018w 40,3,0,0 "RPL2B" "60S large subunit ribosomal protein L8.e" 5,1,0,0 "RPL2B" "60S large subunit ribosomal protein L8.e" ytyfr031c-a 5,1,0,0 "RPL2A" "ribosomal protein L8.e" Training Accuracy: 51/68 (75.00%) Training Frequency class '5/1/0/0': 90/1648 (5.46%) Evaluation on validation data (854 items): ytyjl190c 40,3,0,0 "RPS22A" "ribosomal protein S15a.e.c10" 5,1,0,0 "RPS22A" "ribosomal protein S15a.e.c10" ytyhl001w 40,3,0,0 "RPL14B" "ribosomal protein" 5,1,0,0 "RPL14B" "ribosomal protein" ytyjr007w - 40,3,0,0 "SUI2" "translation initiation factor eIF2, alpha chain" 5,4,0,0 "SUI2" "translation initiation factor eIF2, alpha chain" ytydr012w 40,3,0,0 "RPL4B" "ribosomal protein L4.e.B" 5,1,0,0 "RPL4B" "ribosomal protein L4.e.B" ytyel054c 40,3,0,0 "RPL12A" "60S large subunit ribosomal protein L12.e" 5,1,0,0 "RPL12A" "60S large subunit ribosomal protein L12.e" ytyol149w - 4,5,5,0 "DCP1" "mRNA decapping enzyme" ytyjl189w 40,3,0,0 "RPL39" "60S large subunit ribosomal protein L39.e" 5,1,0,0 "RPL39" "60S large subunit ribosomal protein L39.e" ytyor096w 40,3,0,0 "RPS7A" "ribosomal protein" 5,1,0,0 "RPS7A" "ribosomal protein" ytyhr203c 40,3,0,0 "RPS4B" "ribosomal protein S4.e.c8" 5,1,0,0 "RPS4B" "ribosomal protein S4.e.c8" ytyhl033c 40,3,0,0 "RPL8A" "60S large subunit ribosomal protein L7a.e.A" 5,1,0,0 "RPL8A" "60S large subunit ribosomal protein L7a.e.A" ytylr388w 40,3,0,0 "RPS29A" "ribosomal protein S29.e.A" 5,1,0,0 "RPS29A" "ribosomal protein S29.e.A" ytyer165w - 4,5,5,0 "PAB1" "mRNA polyadenylate-binding protein" 40,10,0,0 "PAB1" "mRNA polyadenylate-binding protein" 40,3,0,0 "PAB1" "mRNA polyadenylate-binding protein" 5,4,0,0 "PAB1" "mRNA polyadenylate-binding protein" ytygr264c - 40,3,0,0 "MES1" "methionyl-tRNA synthetase" 5,10,0,0 "MES1" "methionyl-tRNA synthetase" ytyhr062c - 4,1,4,0 "RPP1" "required for processing of tRNA and 35S rRNA" 4,3,3,0 "RPP1" "required for processing of tRNA and 35S rRNA" 40,10,0,0 "RPP1" "required for processing of tRNA and 35S rRNA" ytyjr145c 40,3,0,0 "RPS4A" "ribosomal protein S4.e.c10" 5,1,0,0 "RPS4A" "ribosomal protein S4.e.c10" ytylr075w 3,3,1,0 "RPL10" "60S large subunit ribosomal protein" 40,3,0,0 "RPL10" "60S large subunit ribosomal protein" 5,1,0,0 "RPL10" "60S large subunit ribosomal protein" 6,10,0,0 "RPL10" "60S large subunit ribosomal protein" ytynl162w 40,3,0,0 "RPL42A" "ribosomal protein L36a.e" 5,1,0,0 "RPL42A" "ribosomal protein L36a.e" ytybr143c - 40,3,0,0 "SUP45" "translational release factor" 5,4,0,0 "SUP45" "translational release factor" ytylr325c 40,3,0,0 "RPL38" "60S large subunit ribosomal protein" 5,1,0,0 "RPL38" "60S large subunit ribosomal protein" ytyol121c 40,3,0,0 "RPS19A" "40S small subunit ribosomal protein S19.e" 5,1,0,0 "RPS19A" "40S small subunit ribosomal protein S19.e" ytyer102w 40,3,0,0 "RPS8B" "ribosomal protein S8.e" 5,1,0,0 "RPS8B" "ribosomal protein S8.e" ytylr333c 40,3,0,0 "RPS25B" "ribosomal protein S25.e.c12" 5,1,0,0 "RPS25B" "ribosomal protein S25.e.c12" ytydl136w 40,3,0,0 "RPL35B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL35B" "60S large subunit ribosomal protein" ytygl103w 40,3,0,0 "RPL28" "60S large subunit ribosomal protein L27a.e" 5,1,0,0 "RPL28" "60S large subunit ribosomal protein L27a.e" ytypr102c 40,3,0,0 "RPL11A" "ribosomal protein L11.e" 5,1,0,0 "RPL11A" "ribosomal protein L11.e" ytycr034w - 1,5,1,0 "FEN1" "fatty acid elongase required for sphingolipid formation" 1,6,1,0 "FEN1" "fatty acid elongase required for sphingolipid formation" 14,1,0,0 "FEN1" "fatty acid elongase required for sphingolipid formation" 14,4,3,1 "FEN1" "fatty acid elongase required for sphingolipid formation" 14,4,3,3 "FEN1" "fatty acid elongase required for sphingolipid formation" 14,4,3,5 "FEN1" "fatty acid elongase required for sphingolipid formation" 40,2,0,0 "FEN1" "fatty acid elongase required for sphingolipid formation" ytylr441c 14,4,3,3 "RPS1A" "ribosomal protein S3a.e" 40,3,0,0 "RPS1A" "ribosomal protein S3a.e" 5,1,0,0 "RPS1A" "ribosomal protein S3a.e" Validation Accuracy: 20/27 (74.07%) Validation Frequency class '5/1/0/0': 42/854 (4.92%) Evaluation on propertest data (1299 items): ytygl123w 40,3,0,0 "RPS2" "40S small subunit ribosomal protein" 5,1,0,0 "RPS2" "40S small subunit ribosomal protein" ytyer055c - 1,1,1,0 "HIS1" "ATP phosphoribosyltransferase" 1,1,4,0 "HIS1" "ATP phosphoribosyltransferase" ytypl198w 40,3,0,0 "RPL7B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL7B" "60S large subunit ribosomal protein" ytyml073c 40,3,0,0 "RPL6A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL6A" "60S large subunit ribosomal protein" ytypr043w 40,3,0,0 "RPL43A" "ribosomal protein L37a.e" 5,1,0,0 "RPL43A" "ribosomal protein L37a.e" ytynl112w - 4,1,4,0 "DBP2" "ATP-dependent RNA helicase of DEAD box family" 40,10,0,0 "DBP2" "ATP-dependent RNA helicase of DEAD box family" ytyor167c 40,3,0,0 "RPS28A" "40S small subunit ribosomal protein S28.e.c15" 5,1,0,0 "RPS28A" "40S small subunit ribosomal protein S28.e.c15" ytygl225w - 40,8,0,0 "GOG5" "GDP-mannose transporter into the lumen of the Golgi" 67,7,0,0 "GOG5" "GDP-mannose transporter into the lumen of the Golgi" 8,7,0,0 "GOG5" "GDP-mannose transporter into the lumen of the Golgi" ytyer074w 40,3,0,0 "RPS24A" "40s small subunit ribosomal protein S24.e" 5,1,0,0 "RPS24A" "40s small subunit ribosomal protein S24.e" ytygr085c 40,3,0,0 "RPL11B" "ribosomal protein" 5,1,0,0 "RPL11B" "ribosomal protein" ytypl220w 40,3,0,0 "RPL1A" "ribosomal protein" 5,1,0,0 "RPL1A" "ribosomal protein" ytyll045c 40,3,0,0 "RPL8B" "60s large subunit ribosomal protein L7a.e.B" 5,1,0,0 "RPL8B" "60s large subunit ribosomal protein L7a.e.B" ytynl119w 5,1,0,0 "null" "weak similarity to M.jannaschii hypothetical protein MJ1257" ytypl143w 40,3,0,0 "RPL33A" "ribosomal protein L35a.e.c16" 5,1,0,0 "RPL33A" "ribosomal protein L35a.e.c16" ytydr471w 40,3,0,0 "RPL27B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL27B" "60S large subunit ribosomal protein" ytynl151c - 4,1,1,0 "RPC31" "DNA-directed RNA polymerase III, 31 KD subunit" 4,3,1,0 "RPC31" "DNA-directed RNA polymerase III, 31 KD subunit" 40,10,0,0 "RPC31" "DNA-directed RNA polymerase III, 31 KD subunit" ytypr163c - 40,3,0,0 "TIF3" "translation initiation factor eIF4B" 5,4,0,0 "TIF3" "translation initiation factor eIF4B" ytyjl136c 40,3,0,0 "RPS21B" "40S small subunit ribosomal protein S21.e" 5,1,0,0 "RPS21B" "40S small subunit ribosomal protein S21.e" ytyjl138c - 40,3,0,0 "TIF2" "translation initiation factor eIF4A" 5,4,0,0 "TIF2" "translation initiation factor eIF4A" ytyor212w - 10,1,5,5 "STE4" "GTP-binding protein beta subunit of the pheromone pathway" 13,11,3,7 "STE4" "GTP-binding protein beta subunit of the pheromone pathway" 14,4,3,1 "STE4" "GTP-binding protein beta subunit of the pheromone pathway" 14,4,3,3 "STE4" "GTP-binding protein beta subunit of the pheromone pathway" 40,2,0,0 "STE4" "GTP-binding protein beta subunit of the pheromone pathway" ytygl031c 40,3,0,0 "RPL24A" "60S large subunit ribosomal protein L24.e.A" 5,1,0,0 "RPL24A" "60S large subunit ribosomal protein L24.e.A" ytygr034w 40,3,0,0 "RPL26B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL26B" "60S large subunit ribosomal protein" ytynl255c 4,99,0,0 "GIS2" "strong similarity to nucleic acid-binding proteins, similarity to Tetrahymena thermophila cnjB protein" 5,1,0,0 "GIS2" "strong similarity to nucleic acid-binding proteins, similarity to Tetrahymena thermophila cnjB protein" ytybl072c 40,3,0,0 "RPS8A" "ribosomal protein S8.e" 5,1,0,0 "RPS8A" "ribosomal protein S8.e" ytylr185w 40,3,0,0 "RPL37A" "ribosomal protein L37.e" 5,1,0,0 "RPL37A" "ribosomal protein L37.e" ytyer043c - 1,7,1,0 "SAH1" "S-adenosyl-L-homocysteine hydrolase" ytygr118w 40,3,0,0 "RPS23A" "40S small subunit ribosomal protein S23.e" 5,1,0,0 "RPS23A" "40S small subunit ribosomal protein S23.e" ytyml063w 40,3,0,0 "RPS1B" "ribosomal protein S3a.e" 5,1,0,0 "RPS1B" "ribosomal protein S3a.e" ytymr242c 40,3,0,0 "RPL20A" "60s large subunit ribosomal protein" 5,1,0,0 "RPL20A" "60s large subunit ribosomal protein" ytykr059w - 40,3,0,0 "TIF1" "translation initiation factor 4A" 5,4,0,0 "TIF1" "translation initiation factor 4A" ytydl182w - 1,1,1,0 "LYS20" "homocitrate synthase" 1,5,1,0 "LYS20" "homocitrate synthase" 40,10,0,0 "LYS20" "homocitrate synthase" ytygl135w 40,3,0,0 "RPL1B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL1B" "60S large subunit ribosomal protein" ytynl209w - 40,3,0,0 "SSB2" "heat shock protein of HSP70 family, cytosolic" 5,99,0,0 "SSB2" "heat shock protein of HSP70 family, cytosolic" ytybl027w 40,3,0,0 "RPL19B" "60S large subunit ribosomal protein L19.e" 5,1,0,0 "RPL19B" "60S large subunit ribosomal protein L19.e" ytynl069c 40,3,0,0 "RPL16B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL16B" "60S large subunit ribosomal protein" ytybr048w 40,3,0,0 "RPS11B" "ribosomal protein S11.e.B" 5,1,0,0 "RPS11B" "ribosomal protein S11.e.B" ytygr027c 40,3,0,0 "RPS25A" "ribosomal protein S25.e.c7" 5,1,0,0 "RPS25A" "ribosomal protein S25.e.c7" ytyol127w 40,3,0,0 "RPL25" "ribosomal protein L23a.e" 5,1,0,0 "RPL25" "ribosomal protein L23a.e" Propertest Accuracy: 27/38 (71.05%) Propertest Frequency class '5/1/0/0': 79/1299 (6.08%) New (unknown) data (854 items): ytydr417c - 99,0,0,0 "null" "questionable ORF" ytyer156c - 99,0,0,0 "null" "similarity to hypothetical C. elegans protein C27H6.5" ytyil158w - 99,0,0,0 "null" "similarity to hypothetical protein YKR100c" ytylr062c - 99,0,0,0 "BUD28" "questionable ORF" ytyol077c - 99,0,0,0 "BRX1" "strong similarity to C.elegans K12H4.3 protein" ytypr118w - 99,0,0,0 "null" "similarity to M.jannaschii translation initiation factor, eIF-2B" ytyol101c - 99,0,0,0 "null" "similarity to YOL002c and YDR492w" ytyml018c - 99,0,0,0 "null" "similarity to YDR438w" ytygl102c - 99,0,0,0 "null" "questionable ORF" ytyjl069c - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein" ytygr123c - 98,0,0,0 "PPT1" "protein ser/thr phosphatase" ytynl010w - 99,0,0,0 "null" "weak similarity to B.subtilis hypothetical protein ykrX" ytydr430c - 99,0,0,0 "null" "similarity to C.perfringens hypothetical hypA protein" ytycr047c - 98,0,0,0 "BUD23" "weak similarity to N-methyltransferases" ytydr339c - 99,0,0,0 "null" "weak similarity to hypothetical protein YOR004w" ytypl142c - 99,0,0,0 "null" "questionable ORF" ytycr087w - 99,0,0,0 "null" "questionable ORF" ytylr405w - 99,0,0,0 "null" "similarity to A.brasilense nifR3 protein" ytymr305c - 98,0,0,0 "SCW10" "similarity to B.japonicum putative beta-(-6)glucan transferase" ytydl166c - 99,0,0,0 "null" "weak similarity to Pyrococcus horikoshii hypothetical protein PHBJ019" ytydr346c - 99,0,0,0 "null" "similarity to hypothetical S.pombe protein" ytynr046w - 99,0,0,0 "null" "strong similarity to S.pombe hypothetical protein SPAC31A2.02" ytygr079w - 99,0,0,0 "null" "hypothetical protein" ytylr413w - 99,0,0,0 "null" "strong similarity to YKL187c" ytyor145c - 99,0,0,0 "null" "strong similarity to hypothtical S. pombe protein and to hypothetical C. elegans protein" ------------------