Rule 419: cechdeeigagasp_eisen_cdc15_30 > 0.46 eval(_1,_2,b0.0_1.0e-8),keyword(_2,inner_membrane),db_ref(_2,prints) = 1 -> class 1/5/7/0 "C-compound, carbohydrate transport" Evaluation on training data (1127 items): ytyil170w 1,5,7,0 "HXT12" "strong similarity to sugar transport proteins" 40,2,0,0 "HXT12" "strong similarity to sugar transport proteins" 67,7,0,0 "HXT12" "strong similarity to sugar transport proteins" 8,19,0,0 "HXT12" "strong similarity to sugar transport proteins" ytynr072w 1,5,7,0 "HXT17" "sugar transport protein" 40,2,0,0 "HXT17" "sugar transport protein" 67,7,0,0 "HXT17" "sugar transport protein" 8,19,0,0 "HXT17" "sugar transport protein" ytyjl219w 1,5,7,0 "HXT9" "hexose transport protein" 40,2,0,0 "HXT9" "hexose transport protein" 67,7,0,0 "HXT9" "hexose transport protein" 8,19,0,0 "HXT9" "hexose transport protein" ytydr343c 1,5,7,0 "HXT6" "high-affinity hexose transporter" 40,2,0,0 "HXT6" "high-affinity hexose transporter" 67,7,0,0 "HXT6" "high-affinity hexose transporter" 8,19,0,0 "HXT6" "high-affinity hexose transporter" ytydr345c 1,5,7,0 "HXT3" "low-affinity hexose transporter" 40,2,0,0 "HXT3" "low-affinity hexose transporter" 67,7,0,0 "HXT3" "low-affinity hexose transporter" 8,19,0,0 "HXT3" "low-affinity hexose transporter" ytybr298c 1,5,7,0 "MAL31" "maltose permease" 40,2,0,0 "MAL31" "maltose permease" 67,7,0,0 "MAL31" "maltose permease" 8,19,0,0 "MAL31" "maltose permease" ytyhr092c 1,5,7,0 "HXT4" "moderate- to low-affinity glucose transporter" 40,2,0,0 "HXT4" "moderate- to low-affinity glucose transporter" 67,7,0,0 "HXT4" "moderate- to low-affinity glucose transporter" 8,19,0,0 "HXT4" "moderate- to low-affinity glucose transporter" Training Accuracy: 7/7 (100.00%) Training Frequency class '1/5/7/0': 18/1127 (1.60%) Evaluation on validation data (587 items): ytylr081w 1,5,7,0 "GAL2" "galactose (and glucose) permease" 40,2,0,0 "GAL2" "galactose (and glucose) permease" 67,7,0,0 "GAL2" "galactose (and glucose) permease" 8,19,0,0 "GAL2" "galactose (and glucose) permease" ytygr289c 1,5,7,0 "MAL11" "general alpha-glucoside permease" 67,7,0,0 "MAL11" "general alpha-glucoside permease" Validation Accuracy: 2/2 (100.00%) Validation Frequency class '1/5/7/0': 9/587 (1.53%) Evaluation on propertest data (889 items): ytydr342c 1,5,7,0 "HXT7" "high-affinity hexose transporter" 40,2,0,0 "HXT7" "high-affinity hexose transporter" 67,7,0,0 "HXT7" "high-affinity hexose transporter" 8,19,0,0 "HXT7" "high-affinity hexose transporter" ytyol156w 1,5,7,0 "HXT11" "low affinity glucose transport protein" 40,2,0,0 "HXT11" "low affinity glucose transport protein" 67,7,0,0 "HXT11" "low affinity glucose transport protein" 8,19,0,0 "HXT11" "low affinity glucose transport protein" ytybl020w - 3,3,1,0 "RFT1" "nuclear division protein" 40,10,0,0 "RFT1" "nuclear division protein" ytymr011w 1,5,7,0 "HXT2" "high-affinity hexose transporter" 40,2,0,0 "HXT2" "high-affinity hexose transporter" 67,7,0,0 "HXT2" "high-affinity hexose transporter" 8,19,0,0 "HXT2" "high-affinity hexose transporter" ytynr056c - 1,6,13,0 "BIO5" "similarity to choline transport protein HNM1P" 67,10,0,0 "BIO5" "similarity to choline transport protein HNM1P" 67,13,0,0 "BIO5" "similarity to choline transport protein HNM1P" ytyel069c 1,5,7,0 "HXT13" "high-affinity hexose transporter" 40,2,0,0 "HXT13" "high-affinity hexose transporter" 67,7,0,0 "HXT13" "high-affinity hexose transporter" 8,19,0,0 "HXT13" "high-affinity hexose transporter" ytyjl214w 1,5,7,0 "HXT8" "hexose transport protein" 40,2,0,0 "HXT8" "hexose transport protein" 67,7,0,0 "HXT8" "hexose transport protein" 8,19,0,0 "HXT8" "hexose transport protein" ytyhr094c 1,5,7,0 "HXT1" "low-affinity hexose transporter" 40,2,0,0 "HXT1" "low-affinity hexose transporter" 67,7,0,0 "HXT1" "low-affinity hexose transporter" 8,19,0,0 "HXT1" "low-affinity hexose transporter" ytyhr096c 1,5,7,0 "HXT5" "member of the hexose transporter family" 40,2,0,0 "HXT5" "member of the hexose transporter family" 67,7,0,0 "HXT5" "member of the hexose transporter family" 8,19,0,0 "HXT5" "member of the hexose transporter family" Propertest Accuracy: 7/9 (77.78%) Propertest Frequency class '1/5/7/0': 15/889 (1.69%) New (unknown) data (587 items): ------------------ Rule 171: eval(_1,_2,gte1.1),classification(_2,leishmania) = 0 yeast_to_yeast(_1,_2,b3.3e-2_0.73),eval(_1,_3,b0.0_1.0e-8),classification(_3,hystricognathi) = 0 yeast_to_yeast(_1,_2,gte0.73),eval(_1,_3,gte1.1),classification(_3,bacteria) = 1 eval(_1,_2,gte1.1),classification(_2,rodentia),db_ref(_2,pir) = 1 eval(_1,_2,gte1.1),keyword(_2,repeat),db_ref(_2,hssp) = 1 eval(_1,_2,gte1.1),classification(_2,agrobacterium),db_ref(_2,interpro) = 0 eval(_1,_2,gte1.1),sq_len(_2,b662_970),classification(_2,staphylococcus) = 0 eval(_1,_2,gte1.1),sq_len(_2,b344_483),db_ref(_2,pir) = 1 eval(_1,_2,b0.0_1.0e-8),mol_wt(_2,b38502_53922),db_ref(_2,transfac) = 1 eval(_1,_2,b0.0_1.0e-8),classification(_2,anopheles),db_ref(_2,pfam) = 0 cechdeeigagasp_church_sig_gal <= 0.9 eval(_1,_2,b4.5e-2_1.1),classification(_2,herpesviridae),db_ref(_2,prosite) = 0 eval(_1,_2,b0.0_1.0e-8),sq_len(_2,b16_344),classification(_2,bacillus) = 0 eval(_1,_2,b0.0_1.0e-8),sq_len(_2,b16_344),classification(_2,cyanobacteria) = 0 cechdeeigagasp_gasch1_1M_sorbitol___30_min <= 0.61 cechdeeigagasp_gasch1_YPD_stationary_phase_1_d_ypd_1 > -1.32 -> class 4/5/1/0 "mRNA synthesis" Evaluation on training data (1127 items): ytyil038c 4,5,1,4 "NOT3" "general negative regulator of transcription, subunit 3" 40,10,0,0 "NOT3" "general negative regulator of transcription, subunit 3" ytygl043w 3,1,5,0 "DST1" "TFIIS (transcription elongation factor)" 4,5,1,1 "DST1" "TFIIS (transcription elongation factor)" 40,10,0,0 "DST1" "TFIIS (transcription elongation factor)" ytyer151c 4,5,1,4 "UBP3" "ubiquitin-specific proteinase" 40,3,0,0 "UBP3" "ubiquitin-specific proteinase" 6,13,1,0 "UBP3" "ubiquitin-specific proteinase" ytyml076c 4,5,1,4 "null" "weak similarity to transcription factor" 40,10,0,0 "null" "weak similarity to transcription factor" ytyhl009c 4,5,1,4 "YAP3" "transcription factor, of a fungal-specific family of bzip proteins" 40,10,0,0 "YAP3" "transcription factor, of a fungal-specific family of bzip proteins" ytyor344c 1,5,4,0 "TYE7" "basic helix-loop-helix transcription factor" 4,5,1,4 "TYE7" "basic helix-loop-helix transcription factor" 40,10,0,0 "TYE7" "basic helix-loop-helix transcription factor" ytycr084c 4,5,1,4 "TUP1" "general transcription repressor" 40,10,0,0 "TUP1" "general transcription repressor" ytygl244w 4,5,1,1 "RTF1" "regulates DNA binding properties of TBP" 40,10,0,0 "RTF1" "regulates DNA binding properties of TBP" ytyfr037c 3,1,9,5 "RSC8" "subunit of the RSC complex" 3,3,1,0 "RSC8" "subunit of the RSC complex" 4,5,1,4 "RSC8" "subunit of the RSC complex" 40,10,3,0 "RSC8" "subunit of the RSC complex" ytyml099c 1,1,4,0 "ARG81" "transcription factor involved in arginine metabolism" 1,2,4,0 "ARG81" "transcription factor involved in arginine metabolism" 4,5,1,4 "ARG81" "transcription factor involved in arginine metabolism" 40,10,0,0 "ARG81" "transcription factor involved in arginine metabolism" ytyfl036w 3,1,3,0 "RPO41" "DNA-directed RNA polymerase, mitochondrial" 4,5,1,1 "RPO41" "DNA-directed RNA polymerase, mitochondrial" 40,16,0,0 "RPO41" "DNA-directed RNA polymerase, mitochondrial" ytydr207c 1,1,4,0 "UME6" "negative transcriptional regulator" 1,2,4,0 "UME6" "negative transcriptional regulator" 1,6,10,0 "UME6" "negative transcriptional regulator" 3,3,1,0 "UME6" "negative transcriptional regulator" 3,3,2,0 "UME6" "negative transcriptional regulator" 4,5,1,4 "UME6" "negative transcriptional regulator" 40,10,0,0 "UME6" "negative transcriptional regulator" ytyjl056c 4,5,1,4 "ZAP1" "metalloregulatory protein involved in zinc-responsive transcriptional regulation" 40,10,0,0 "ZAP1" "metalloregulatory protein involved in zinc-responsive transcriptional regulation" ytymr042w 1,1,4,0 "ARG80" "transcription factor involved in arginine metabolism" 1,2,4,0 "ARG80" "transcription factor involved in arginine metabolism" 4,5,1,4 "ARG80" "transcription factor involved in arginine metabolism" 40,10,0,0 "ARG80" "transcription factor involved in arginine metabolism" ytykl032c 4,5,1,4 "IXR1" "intrastrand crosslink recognition protein and transcription factor" 40,10,0,0 "IXR1" "intrastrand crosslink recognition protein and transcription factor" ytyol051w 1,5,4,0 "GAL11" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit" 14,4,3,3 "GAL11" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit" 14,4,3,5 "GAL11" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit" 4,5,1,1 "GAL11" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit" 40,10,0,0 "GAL11" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit" ytyel009c 1,1,4,0 "GCN4" "transcriptional activator of amino acid biosynthetic genes" 4,5,1,4 "GCN4" "transcriptional activator of amino acid biosynthetic genes" 40,10,0,0 "GCN4" "transcriptional activator of amino acid biosynthetic genes" ytygl035c 1,5,4,0 "MIG1" "transcriptional repressor" 4,5,1,4 "MIG1" "transcriptional repressor" 40,10,0,0 "MIG1" "transcriptional repressor" ytynl025c 1,5,4,0 "SSN8" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit, cyclin C homolog" 3,3,2,0 "SSN8" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit, cyclin C homolog" 4,5,1,1 "SSN8" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit, cyclin C homolog" 40,10,0,0 "SSN8" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit, cyclin C homolog" ytynl199c 1,5,4,0 "GCR2" "glycolytic genes transcriptional activator" 4,5,1,4 "GCR2" "glycolytic genes transcriptional activator" 40,10,0,0 "GCR2" "glycolytic genes transcriptional activator" ytymr182c 4,5,1,4 "RGM1" "transcriptional repressor protein" 40,10,0,0 "RGM1" "transcriptional repressor protein" ytyol001w 1,4,4,0 "PHO80" "cyclin" 4,5,1,4 "PHO80" "cyclin" 40,10,0,0 "PHO80" "cyclin" ytybr198c 4,5,1,1 "TAF90" "TFIID and SAGA subunit" 4,5,1,4 "TAF90" "TFIID and SAGA subunit" 40,10,0,0 "TAF90" "TFIID and SAGA subunit" ytykr099w 1,1,4,0 "BAS1" "transcription factor" 1,3,13,0 "BAS1" "transcription factor" 4,5,1,4 "BAS1" "transcription factor" 40,10,0,0 "BAS1" "transcription factor" ytyjl206c 4,5,1,4 "null" "similarity to YIL130p and PUT3P" ytygl254w 1,2,4,0 "FZF1" "sulfite resistance protein" 11,7,0,0 "FZF1" "sulfite resistance protein" 4,5,1,4 "FZF1" "sulfite resistance protein" 40,10,0,0 "FZF1" "sulfite resistance protein" ytyjr147w 11,1,0,0 "HMS2" "High-copy MEP2 Suppressor" 4,5,1,4 "HMS2" "High-copy MEP2 Suppressor" ytyor028c 3,3,1,0 "CIN5" "transcriptional activator" 4,5,1,4 "CIN5" "transcriptional activator" 40,10,0,0 "CIN5" "transcriptional activator" ytybr049c 4,1,1,0 "REB1" "transcription factor" 4,5,1,4 "REB1" "transcription factor" 40,10,0,0 "REB1" "transcription factor" ytyir018w 4,5,1,4 "YAP5" "involved in transcription activation" 40,10,0,0 "YAP5" "involved in transcription activation" ytyol028c 4,5,1,4 "YAP7" "involved in transcription activation" 40,10,0,0 "YAP7" "involved in transcription activation" ytydl070w 4,5,1,4 "BDF2" "similarity to bromodomain protein BDF1P" ytyer111c 3,3,1,0 "SWI4" "transcription factor" 4,5,1,4 "SWI4" "transcription factor" 40,10,0,0 "SWI4" "transcription factor" ytygl025c 3,1,5,0 "PGD1" "mediator complex subunit" 4,5,1,4 "PGD1" "mediator complex subunit" 40,10,0,0 "PGD1" "mediator complex subunit" ytycr106w 4,5,1,4 "null" "similarity to transcription factor" 40,10,0,0 "null" "similarity to transcription factor" ytygr044c 3,3,1,0 "RME1" "zinc-finger transcription factor" 3,3,2,0 "RME1" "zinc-finger transcription factor" 4,5,1,4 "RME1" "zinc-finger transcription factor" 40,10,0,0 "RME1" "zinc-finger transcription factor" ytydr173c 1,1,4,0 "ARG82" "arginine metabolism transcription factor" 14,4,3,5 "ARG82" "arginine metabolism transcription factor" 4,5,1,4 "ARG82" "arginine metabolism transcription factor" 40,10,0,0 "ARG82" "arginine metabolism transcription factor" ytymr070w 4,5,1,4 "MOT3" "high-copy suppressor of MOT1-SPT3 synthetic lethality" Training Accuracy: 38/38 (100.00%) Training Frequency class '4/5/1/0': 174/1127 (15.44%) Evaluation on validation data (587 items): ytyll010c - 6,7,3,0 "PSR1" "plasma membrane phosphatase involved in sodium stress response" ytykl038w 1,5,4,0 "RGT1" "regulator of glucose-induced genes" 4,5,1,4 "RGT1" "regulator of glucose-induced genes" 40,10,0,0 "RGT1" "regulator of glucose-induced genes" ytypr104c 4,5,1,4 "FHL1" "transcriptional activator of the forkhead/hnf3 family" 40,10,0,0 "FHL1" "transcriptional activator of the forkhead/hnf3 family" ytydr096w - 3,1,5,1 "GIS1" "DNA damage-responsive repressor of PHR1" ytygl073w 11,1,0,0 "HSF1" "heat shock transcription factor" 3,3,1,0 "HSF1" "heat shock transcription factor" 4,5,1,4 "HSF1" "heat shock transcription factor" 40,10,0,0 "HSF1" "heat shock transcription factor" ytygr252w 3,1,9,5 "GCN5" "histone acetyltransferase" 4,5,1,4 "GCN5" "histone acetyltransferase" 40,10,0,0 "GCN5" "histone acetyltransferase" 6,7,0,0 "GCN5" "histone acetyltransferase" ytybl103c 1,5,4,0 "RTG3" "bHLH/zip transcription factor that regulates CIT2 gene expression" 4,5,1,4 "RTG3" "bHLH/zip transcription factor that regulates CIT2 gene expression" 40,10,0,0 "RTG3" "bHLH/zip transcription factor that regulates CIT2 gene expression" ytydr448w 4,5,1,4 "ADA2" "general transcriptional adaptor or co-activator" 40,10,0,0 "ADA2" "general transcriptional adaptor or co-activator" ytyjr127c - 4,5,99,0 "ZMS1" "transcription factor with similarity to regulatory protein ARD1P" ytylr399c 14,4,3,5 "BDF1" "sporulation protein" 4,5,1,4 "BDF1" "sporulation protein" 40,10,0,0 "BDF1" "sporulation protein" ytyer169w 4,5,1,4 "RPH1" "similarity to human retinoblastoma binding protein 2" ytydr379w - 10,1,99,0 "RGA2" "similarity to Dbm1p and to the rat GAP-associated protein p190" ytycr089w - 14,4,3,3 "FIG2" "required for efficient mating" 40,1,0,0 "FIG2" "required for efficient mating" ytylr228c 4,5,1,4 "ECM22" "strong similarity to YDR213w, weak similarity to LYS14P" ytyir023w 1,1,4,0 "DAL81" "transcriptional activator for allantoin and GABA catabolic genes" 1,2,4,0 "DAL81" "transcriptional activator for allantoin and GABA catabolic genes" 1,3,13,0 "DAL81" "transcriptional activator for allantoin and GABA catabolic genes" 4,5,1,4 "DAL81" "transcriptional activator for allantoin and GABA catabolic genes" 40,10,0,0 "DAL81" "transcriptional activator for allantoin and GABA catabolic genes" ytyer014w - 1,7,1,0 "HEM14" "protoporphyrinogen oxidase, mitochondrial" 40,16,0,0 "HEM14" "protoporphyrinogen oxidase, mitochondrial" ytymr109w - 14,4,3,1 "MYO5" "myosin I" 40,4,0,0 "MYO5" "myosin I" 8,22,0,0 "MYO5" "myosin I" ytymr037c 11,1,0,0 "MSN2" "stress responsive regulatory protein" 4,5,1,4 "MSN2" "stress responsive regulatory protein" 40,10,0,0 "MSN2" "stress responsive regulatory protein" 40,3,0,0 "MSN2" "stress responsive regulatory protein" ytydl056w 3,3,1,0 "MBP1" "transcription factor, subunit of the MBF factor" 4,5,1,4 "MBP1" "transcription factor, subunit of the MBF factor" 40,10,0,0 "MBP1" "transcription factor, subunit of the MBF factor" ytynl167c 4,5,1,4 "SKO1" "cre-binding bzip protein" 40,10,0,0 "SKO1" "cre-binding bzip protein" ytyor127w - 14,4,3,1 "RGA1" "RHO-type GTPase-activating protein for CDC42P" 14,4,3,3 "RGA1" "RHO-type GTPase-activating protein for CDC42P" ytybl066c 14,4,3,5 "SEF1" "putative transcription factor" 4,5,1,4 "SEF1" "putative transcription factor" 40,10,0,0 "SEF1" "putative transcription factor" Validation Accuracy: 14/22 (63.64%) Validation Frequency class '4/5/1/0': 82/587 (13.97%) Evaluation on propertest data (889 items): ytylr020c - 1,6,4,0 "null" "similarity to triacylglycerol lipase" ytydr174w - 40,10,3,0 "HMO1" "Non-histone protein" ytypr025c 3,1,5,1 "CCL1" "TFIIH subunit (transcription initiation factor), cyclin C component" 3,3,1,0 "CCL1" "TFIIH subunit (transcription initiation factor), cyclin C component" 4,5,1,1 "CCL1" "TFIIH subunit (transcription initiation factor), cyclin C component" 40,10,0,0 "CCL1" "TFIIH subunit (transcription initiation factor), cyclin C component" ytydr416w - 3,3,1,0 "SYF1" "synthetic lethal with CDC40" 4,5,5,1 "SYF1" "synthetic lethal with CDC40" ytyjl006c 4,5,1,4 "CTK2" "carboxy-terminal domain (CTD) kinase, beta subunit" 40,10,0,0 "CTK2" "carboxy-terminal domain (CTD) kinase, beta subunit" ytygl071w 13,1,1,1 "RCS1" "iron-regulated transcriptional repressor" 4,5,1,4 "RCS1" "iron-regulated transcriptional repressor" 40,10,0,0 "RCS1" "iron-regulated transcriptional repressor" ytynl027w 11,1,0,0 "CRZ1" "calcineurin responsive zinc-finger" 13,1,1,99 "CRZ1" "calcineurin responsive zinc-finger" 4,5,1,4 "CRZ1" "calcineurin responsive zinc-finger" ytycr065w 4,5,1,4 "HCM1" "transcription factor" 40,10,0,0 "HCM1" "transcription factor" ytylr131c 1,5,4,0 "ACE2" "metallothionein expression activator" 3,3,3,0 "ACE2" "metallothionein expression activator" 4,5,1,4 "ACE2" "metallothionein expression activator" 40,10,0,0 "ACE2" "metallothionein expression activator" ytypr065w 1,7,7,0 "ROX1" "heme-dependent transcriptional repressor of hypoxic genes" 4,5,1,4 "ROX1" "heme-dependent transcriptional repressor of hypoxic genes" 40,10,0,0 "ROX1" "heme-dependent transcriptional repressor of hypoxic genes" ytydr463w 4,3,3,0 "STP1" "pre-tRNA splicing protein, transcription factor" 4,5,1,4 "STP1" "pre-tRNA splicing protein, transcription factor" 40,10,0,0 "STP1" "pre-tRNA splicing protein, transcription factor" ytyor188w - 14,4,3,1 "MSB1" "morphogenesis-related protein" ytyml010w 3,1,9,5 "SPT5" "transcription elongation protein" 4,5,1,1 "SPT5" "transcription elongation protein" 40,10,0,0 "SPT5" "transcription elongation protein" ytydr043c 1,5,4,0 "NRG1" "transcriptional repressor for glucose repression of STA1 gene expression" 4,5,1,4 "NRG1" "transcriptional repressor for glucose repression of STA1 gene expression" ytyer098w - 6,13,1,0 "UBP9" "ubiquitin carboxyl-terminal hydrolase" ytydr146c 14,4,3,3 "SWI5" "transcription factor" 4,5,1,4 "SWI5" "transcription factor" 40,10,0,0 "SWI5" "transcription factor" ytydl049c - 1,5,1,0 "KNH1" "functional homolog of KRE9" ytypl089c 14,1,3,99 "RLM1" "transcription factor of the MADS box family" 4,5,1,4 "RLM1" "transcription factor of the MADS box family" 40,10,0,0 "RLM1" "transcription factor of the MADS box family" ytymr213w - 3,3,1,0 "CEF1" "required during G2/M transition" ytylr263w - 3,1,5,0 "RED1" "meiosis-specific protein" 3,3,2,0 "RED1" "meiosis-specific protein" 30,10,3,0 "RED1" "meiosis-specific protein" 40,10,0,0 "RED1" "meiosis-specific protein" ytykl028w 4,5,1,1 "TFA1" "TFIIE subunit (transcription initiation factor), 66 kD" 40,10,0,0 "TFA1" "TFIIE subunit (transcription initiation factor), 66 kD" ytykl043w 14,4,3,1 "PHD1" "transcription factor" 4,5,1,4 "PHD1" "transcription factor" 40,10,0,0 "PHD1" "transcription factor" ytyer028c - 4,5,99,0 "null" "similarity to MIG1P" ytydl155w - 3,3,1,0 "CLB3" "cyclin, G2/M-specific" ytyjl174w - 1,5,1,0 "KRE9" "cell wall synthesis protein" 14,1,0,0 "KRE9" "cell wall synthesis protein" 14,4,3,1 "KRE9" "cell wall synthesis protein" 14,4,3,3 "KRE9" "cell wall synthesis protein" 40,27,0,0 "KRE9" "cell wall synthesis protein" ytyil036w 3,1,3,0 "CST6" "ATF/CREB activator" 4,5,1,4 "CST6" "ATF/CREB activator" ytyil131c 4,5,1,4 "FKH1" "forkhead protein, involved in transcriptional silencing, cell morphology and cell cycle" 40,10,0,0 "FKH1" "forkhead protein, involved in transcriptional silencing, cell morphology and cell cycle" Propertest Accuracy: 16/27 (59.26%) Propertest Frequency class '4/5/1/0': 149/889 (16.76%) New (unknown) data (587 items): ytydl002c - 98,0,0,0 "NHP10" "Non-histone protein" ytybr267w - 99,0,0,0 "null" "similarity to hypothetical protein YLR387c" ytykl084w - 99,0,0,0 "null" "strong similarity to S.pombe hypothetical protein SPAC29B12" ytyjl019w - 99,0,0,0 "null" "weak similarity to hypothetical protein C. elegans" ytyml002w - 99,0,0,0 "null" "hypothetical protein" ytynl338w - 99,0,0,0 "null" "strong similarity to subtelomeric encoded poteins" ytyhr186c - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein C10C5.6" ytydr520c - 99,0,0,0 "null" "weak similarity to transcription factors of the zinc finger class" ytydl012c - 99,0,0,0 "null" "strong similarity to hypothetical protein YBR016w and YDR210w" ytybr007c - 99,0,0,0 "null" "hypothetical protein" ytynl047c - 99,0,0,0 "null" "similarity to probable transcription factor ASK10P and hypothetical protein YPR115w, and strong similarity to hypothetical protein YIL105c" ytyir010w - 99,0,0,0 "null" "hypothetical protein" ytydl117w - 99,0,0,0 "CYK3" "similarity to hypothetical S. pombe protein, protein possibly involved in cytokinesis" ytygr296w - 99,0,0,0 "YRF1-3" "strong similarity to YPL283c; YNL339c and other Y' encoded proteins" ytybr281c - 99,0,0,0 "null" "similarity to hypothetical protein YFR044c" ytyfl024c - 99,0,0,0 "EPL1" "weak similarity to YMR164c and GAL11P" ytynl124w - 99,0,0,0 "null" "similarity to hypothetical S. pombe protein" ytyhr131c - 99,0,0,0 "null" "similarity to hypothetical protein YNL144c" ytybr066c - 99,0,0,0 "NRG2" "weak similarity to A.niger carbon catabolite repressor protein" ytyjl084c - 99,0,0,0 "null" "similarity to hypothetical protein YKR021w" ytyml133c - 99,0,0,0 "null" "strong similarity to other subtelomer encoded proteins" ------------------ Rule 421: cechdeeigagasp_gasch1_37C_to_25C_shock___30_min <= -0.43 eval(_1,_2,gte1.1),sq_len(_2,b483_662),classification(_2,tailed_phages) = 1 eval(_1,_2,b0.0_1.0e-8),keyword(_2,inner_membrane),db_ref(_2,prints) = 1 -> class 67/50/25/0 "ABC transporters" Evaluation on training data (1127 items): ytyor011w 67,50,25,0 "AUS1" "strong similarity to ATP-dependent permeases" ytyol075c 67,50,25,0 "null" "similarity to A.gambiae ATP-binding-cassette protein" ytypl058c 67,50,25,0 "PDR12" "multidrug resistance transporter" ytyil013c 40,2,0,0 "PDR11" "membrane transporter" 67,28,0,0 "PDR11" "membrane transporter" 67,50,25,0 "PDR11" "membrane transporter" Training Accuracy: 4/4 (100.00%) Training Frequency class '67/50/25/0': 16/1127 (1.42%) Evaluation on validation data (587 items): ytyor153w 1,6,13,0 "PDR5" "pleiotropic drug resistance protein" 11,7,0,0 "PDR5" "pleiotropic drug resistance protein" 13,1,1,1 "PDR5" "pleiotropic drug resistance protein" 40,2,0,0 "PDR5" "pleiotropic drug resistance protein" 67,4,1,2 "PDR5" "pleiotropic drug resistance protein" 67,50,25,0 "PDR5" "pleiotropic drug resistance protein" ytynr070w 11,7,0,0 "null" "strong similarity to SNQ2P" 67,50,25,0 "null" "strong similarity to SNQ2P" ytycr011c 40,2,0,0 "ADP1" "ATP-dependent permease" 67,50,25,0 "ADP1" "ATP-dependent permease" Validation Accuracy: 3/3 (100.00%) Validation Frequency class '67/50/25/0': 5/587 (0.85%) Evaluation on propertest data (889 items): ytydr135c 11,7,0,0 "YCF1" "glutathione S-conjugate transporter, vacuolar" 40,25,0,0 "YCF1" "glutathione S-conjugate transporter, vacuolar" 67,50,25,0 "YCF1" "glutathione S-conjugate transporter, vacuolar" 8,13,0,0 "YCF1" "glutathione S-conjugate transporter, vacuolar" ytydr406w 67,50,25,0 "PDR15" "ATP-binding cassette transporter family member" Propertest Accuracy: 2/2 (100.00%) Propertest Frequency class '67/50/25/0': 7/889 (0.79%) New (unknown) data (587 items): ------------------