Rule 1285: r7_bkg > 636 g4_ratio <= 1.18 r4_ratio <= 1.33 r7_ratio > 1.85 g2dashbkg > 3089 -> class 2/13/0/0 "respiration" Evaluation on training data (1607 items): ytydl004w 13,1,1,3 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 2,13,0,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 40,16,0,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 67,50,22,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 8,4,0,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" ytydl067c 2,13,0,0 "COX9" "cytochrome-c oxidase chain VIIA" 40,16,0,0 "COX9" "cytochrome-c oxidase chain VIIA" 6,10,0,0 "COX9" "cytochrome-c oxidase chain VIIA" ytydr377w 2,13,0,0 "ATP17" "ATP synthase complex, subunit f" 40,16,0,0 "ATP17" "ATP synthase complex, subunit f" 6,10,0,0 "ATP17" "ATP synthase complex, subunit f" ytygl191w 2,13,0,0 "COX13" "cytochrome-c oxidase chain VIa" 40,16,0,0 "COX13" "cytochrome-c oxidase chain VIa" ytyjr121w 13,1,1,3 "ATP2" "F1F0-ATPase complex, F1 beta subunit" 2,13,0,0 "ATP2" "F1F0-ATPase complex, F1 beta subunit" 40,16,0,0 "ATP2" "F1F0-ATPase complex, F1 beta subunit" 67,50,22,0 "ATP2" "F1F0-ATPase complex, F1 beta subunit" 8,4,0,0 "ATP2" "F1F0-ATPase complex, F1 beta subunit" ytykl016c 13,1,1,3 "ATP7" "F1F0-ATPase complex, FO D subunit" 2,13,0,0 "ATP7" "F1F0-ATPase complex, FO D subunit" 40,16,0,0 "ATP7" "F1F0-ATPase complex, FO D subunit" 67,50,22,0 "ATP7" "F1F0-ATPase complex, FO D subunit" 8,4,0,0 "ATP7" "F1F0-ATPase complex, FO D subunit" ytykl150w 2,13,0,0 "MCR1" "cytochrome-b5 reductase" 40,16,0,0 "MCR1" "cytochrome-b5 reductase" ytykl163w - 11,1,0,0 "PIR3" "member of the PIR1P/Pir2p/PIR3P family" 40,1,0,0 "PIR3" "member of the PIR1P/Pir2p/PIR3P family" ytylr295c 13,1,1,3 "ATP14" "F1F0-ATPase complex, subunit h" 2,13,0,0 "ATP14" "F1F0-ATPase complex, subunit h" 40,16,0,0 "ATP14" "F1F0-ATPase complex, subunit h" 67,50,22,0 "ATP14" "F1F0-ATPase complex, subunit h" 8,4,0,0 "ATP14" "F1F0-ATPase complex, subunit h" ytymr145c 2,13,0,0 "NDH1" "mitochondrial cytosolically directed NADH dehydrogenase" 40,16,0,0 "NDH1" "mitochondrial cytosolically directed NADH dehydrogenase" ytynl052w 2,13,0,0 "COX5A" "cytochrome-c oxidase chain V.A precursor" 40,16,0,0 "COX5A" "cytochrome-c oxidase chain V.A precursor" Training Accuracy: 10/11 (90.91%) Training Frequency class '2/13/0/0': 32/1607 (1.99%) Evaluation on validation data (843 items): ytybr067c - 1,6,99,0 "TIP1" "esterase" 11,1,0,0 "TIP1" "esterase" 40,1,0,0 "TIP1" "esterase" ytybr149w - 1,5,1,0 "ARA1" "D-arabinose dehydrogenase, large subunit" ytybr222c - 1,6,1,0 "FAT2" "AMP-binding protein, peroxisomal" 40,19,0,0 "FAT2" "AMP-binding protein, peroxisomal" ytyfr033c 2,13,0,0 "QCR6" "ubiquinol--cytochrome-c reductase 17K protein" 40,16,0,0 "QCR6" "ubiquinol--cytochrome-c reductase 17K protein" ytyil125w - 1,5,1,0 "KGD1" "2-oxoglutarate dehydrogenase complex E1 component" 2,10,0,0 "KGD1" "2-oxoglutarate dehydrogenase complex E1 component" 40,16,0,0 "KGD1" "2-oxoglutarate dehydrogenase complex E1 component" ytyjr077c - 1,4,7,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 13,1,3,3 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 40,16,0,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 67,4,7,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 8,4,0,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" ytykr046c 2,13,0,0 "null" "hypothetical protein" 3,3,2,0 "null" "hypothetical protein" ytynl104c - 1,1,1,0 "LEU4" "2-isopropylmalalate synthase" 40,16,0,0 "LEU4" "2-isopropylmalalate synthase" 40,3,0,0 "LEU4" "2-isopropylmalalate synthase" ytypl078c 13,1,1,3 "ATP4" "F1F0-ATPase complex, F0 subunit B" 2,13,0,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" 40,16,0,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" 67,50,22,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" 8,4,0,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" Validation Accuracy: 3/9 (33.33%) Validation Frequency class '2/13/0/0': 16/843 (1.90%) Evaluation on propertest data (1276 items): ytybl030c - 1,3,19,0 "PET9" "ADP/ATP carrier protein (MCF)" 40,16,0,0 "PET9" "ADP/ATP carrier protein (MCF)" 67,16,0,0 "PET9" "ADP/ATP carrier protein (MCF)" 8,4,0,0 "PET9" "ADP/ATP carrier protein (MCF)" ytybr212w - 14,1,0,0 "NGR1" "glucose-repressible RNA-binding protein" 4,99,0,0 "NGR1" "glucose-repressible RNA-binding protein" ytybr218c - 1,5,1,0 "PYC2" "pyruvate carboxylase 2" 2,1,0,0 "PYC2" "pyruvate carboxylase 2" 40,3,0,0 "PYC2" "pyruvate carboxylase 2" ytydr513w - 1,3,7,0 "TTR1" "glutaredoxin" 11,1,0,0 "TTR1" "glutaredoxin" 11,7,0,0 "TTR1" "glutaredoxin" 40,3,0,0 "TTR1" "glutaredoxin" ytyhr051w 2,13,0,0 "COX6" "cytochrome-c oxidase subunit VI" 40,16,0,0 "COX6" "cytochrome-c oxidase subunit VI" ytykl067w - 1,3,99,0 "YNK1" "nucleoside diphosphate kinase" 40,3,0,0 "YNK1" "nucleoside diphosphate kinase" ytylr038c 2,13,0,0 "COX12" "cytochrome-c oxidase, subunit VIB" 40,16,0,0 "COX12" "cytochrome-c oxidase, subunit VIB" 6,10,0,0 "COX12" "cytochrome-c oxidase, subunit VIB" ytylr164w - 1,5,1,0 "null" "strong similarity to SDH4P" 2,10,0,0 "null" "strong similarity to SDH4P" ytylr395c 2,13,0,0 "COX8" "cytochrome-c oxidase chain VIII" 40,16,0,0 "COX8" "cytochrome-c oxidase chain VIII" ytyml004c - 1,1,10,0 "GLO1" "glyoxalase I" ytyml091c - 4,3,3,0 "RPM2" "ribonuclease P precursor, mitochondrial" 40,16,0,0 "RPM2" "ribonuclease P precursor, mitochondrial" ytynl037c - 1,5,1,0 "IDH1" "isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial" 2,10,0,0 "IDH1" "isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial" 4,99,0,0 "IDH1" "isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial" 40,16,0,0 "IDH1" "isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial" ytynl045w - 1,6,1,0 "null" "strong similarity to human leukotriene-A4 hydrolase" ytynl055c - 40,16,0,0 "POR1" "mitochondrial outer membrane porin" 67,99,0,0 "POR1" "mitochondrial outer membrane porin" 8,4,0,0 "POR1" "mitochondrial outer membrane porin" ytypl262w - 2,10,0,0 "FUM1" "fumarate hydratase" 40,16,0,0 "FUM1" "fumarate hydratase" 40,3,0,0 "FUM1" "fumarate hydratase" ytypr020w 2,13,0,0 "ATP20" "subunit G of the dimeric form of mitochondrial F1F0-ATP Synthase" 40,16,0,0 "ATP20" "subunit G of the dimeric form of mitochondrial F1F0-ATP Synthase" ytypr026w - 1,5,1,0 "ATH1" "acid trehalase, vacuolar" 11,1,0,0 "ATH1" "acid trehalase, vacuolar" 2,19,0,0 "ATH1" "acid trehalase, vacuolar" 40,25,0,0 "ATH1" "acid trehalase, vacuolar" Propertest Accuracy: 4/17 (23.53%) Propertest Frequency class '2/13/0/0': 27/1276 (2.12%) New (unknown) data (843 items): ytydr070c - 99,0,0,0 "null" "hypothetical protein" ytyer004w - 99,0,0,0 "null" "similarity to hypothetical E.coli and C.elegans proteins" ytygl121c - 99,0,0,0 "null" "hypothetical protein" ytygr182c - 99,0,0,0 "null" "questionable ORF" ytyhr138c - 99,0,0,0 "null" "hypothetical protein" ytyhr162w - 99,0,0,0 "null" "strong similarity to hypothetical protein YGR243w" ytyjl151c - 99,0,0,0 "SNA3" "similarity to hypothetical protein SNA4/YDL123w" ytylr217w - 99,0,0,0 "null" "questionable ORF" ytyor007c - 99,0,0,0 "SGT2" "similarity to protein phosphatases" ytyol053w - 99,0,0,0 "null" "hypothetical protein" ytyol109w - 98,0,0,0 "ZEO1" "weak similarity to G.hirsutum embryonic abundant protein D-7" ------------------ Rule 1333: g5_bkg <= 2072 r5_ratio > 0.54 r7_ratio <= 0.28 g7dashbkg > 7743 -> class 5/1/0/0 "ribosome biogenesis" Evaluation on training data (1607 items): ytybr181c 40,3,0,0 "RPS6B" "ribosomal protein S6.e" 5,1,0,0 "RPS6B" "ribosomal protein S6.e" ytybr189w 40,3,0,0 "RPS9B" "ribosomal protein S9.e.B" 5,1,0,0 "RPS9B" "ribosomal protein S9.e.B" ytybr191w 40,3,0,0 "RPL21A" "ribosomal protein L21.e" 5,1,0,0 "RPL21A" "ribosomal protein L21.e" ytybr249c - 1,1,1,0 "ARO4" "2-dehydro-3-deoxyphosphoheptonate aldolase, tyrosine-inhibited" 40,3,0,0 "ARO4" "2-dehydro-3-deoxyphosphoheptonate aldolase, tyrosine-inhibited" ytydl061c 40,3,0,0 "RPS29B" "ribosomal protein S29.e.B" 5,1,0,0 "RPS29B" "ribosomal protein S29.e.B" ytydl075w 40,3,0,0 "RPL31A" "60S large subunit ribosomal protein L31.e" 5,1,0,0 "RPL31A" "60S large subunit ribosomal protein L31.e" ytydl082w 40,3,0,0 "RPL13A" "60S large subunit ribosomal protein L13" 5,1,0,0 "RPL13A" "60S large subunit ribosomal protein L13" ytydl191w 40,3,0,0 "RPL35A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL35A" "60S large subunit ribosomal protein" ytydr025w 40,3,0,0 "RPS11A" "ribosomal protein S11.e" 5,1,0,0 "RPS11A" "ribosomal protein S11.e" ytydr064w 40,3,0,0 "RPS13" "ribosomal protein" 5,1,0,0 "RPS13" "ribosomal protein" ytydr447c 40,3,0,0 "RPS17B" "ribosomal protein S17.e.B" 5,1,0,0 "RPS17B" "ribosomal protein S17.e.B" ytydr450w 40,3,0,0 "RPS18A" "ribosomal protein S18.e.c4" 5,1,0,0 "RPS18A" "ribosomal protein S18.e.c4" ytydr500c 40,3,0,0 "RPL37B" "ribosomal protein L.37.e" 5,1,0,0 "RPL37B" "ribosomal protein L.37.e" ytyer117w 40,3,0,0 "RPL23B" "ribosomal protein L23.e" 5,1,0,0 "RPL23B" "ribosomal protein L23.e" ytyer131w 40,3,0,0 "RPS26B" "40S small subunit ribosomal protein S26e-c5" 5,1,0,0 "RPS26B" "40S small subunit ribosomal protein S26e-c5" ytygl030w 40,3,0,0 "RPL30" "60S large subunit ribosomal protein L30.e" 5,1,0,0 "RPL30" "60S large subunit ribosomal protein L30.e" ytygl076c 40,3,0,0 "RPL7A" "60S large subunit ribosomal protein L7.e.A" 5,1,0,0 "RPL7A" "60S large subunit ribosomal protein L7.e.A" ytygl147c 40,3,0,0 "RPL9A" "ribosomal protein L9.e" 5,1,0,0 "RPL9A" "ribosomal protein L9.e" ytygl189c 40,3,0,0 "RPS26A" "40S small subunit ribosomal protein S26e.c7" 5,1,0,0 "RPS26A" "40S small subunit ribosomal protein S26e.c7" ytygr148c 40,3,0,0 "RPL24B" "60S large subunit ribosomal protein L24.e.B" 5,1,0,0 "RPL24B" "60S large subunit ribosomal protein L24.e.B" ytygr214w 14,4,3,1 "RPS0A" "40S ribosomal protein p40 homolog A" 40,3,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" 5,1,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" 6,10,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" ytyhl015w 40,3,0,0 "RPS20" "ribosomal protein" 5,1,0,0 "RPS20" "ribosomal protein" ytyil018w 40,3,0,0 "RPL2B" "60S large subunit ribosomal protein L8.e" 5,1,0,0 "RPL2B" "60S large subunit ribosomal protein L8.e" ytyil052c 40,3,0,0 "RPL34B" "ribosomal protein L34.e" 5,1,0,0 "RPL34B" "ribosomal protein L34.e" ytyil133c 40,3,0,0 "RPL16A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL16A" "60S large subunit ribosomal protein" ytyjl177w 40,3,0,0 "RPL17B" "60s large subunit ribosomal protein L17.e" 5,1,0,0 "RPL17B" "60s large subunit ribosomal protein L17.e" ytyjr123w 40,3,0,0 "RPS5" "ribosomal protein S5.e" 5,1,0,0 "RPS5" "ribosomal protein S5.e" ytykl006w 40,3,0,0 "RPL14A" "ribosomal protein" 5,1,0,0 "RPL14A" "ribosomal protein" ytykl056c 40,3,0,0 "null" "strong similarity to human IgE-dependent histamine-releasing factor" 5,1,0,0 "null" "strong similarity to human IgE-dependent histamine-releasing factor" ytykl081w - 40,3,0,0 "TEF4" "translation elongation factor eEF1, gamma chain" 5,4,0,0 "TEF4" "translation elongation factor eEF1, gamma chain" ytykr057w 40,3,0,0 "RPS21A" "ribosomal protein S21.e" 5,1,0,0 "RPS21A" "ribosomal protein S21.e" ytylr029c 40,3,0,0 "RPL15A" "60s large subunit ribosomal protein L15.e.c12" 5,1,0,0 "RPL15A" "60s large subunit ribosomal protein L15.e.c12" ytylr048w 40,3,0,0 "RPS0B" "40S ribosomal protein p40 homolog B" 5,1,0,0 "RPS0B" "40S ribosomal protein p40 homolog B" 6,10,0,0 "RPS0B" "40S ribosomal protein p40 homolog B" ytylr061w 5,1,0,0 "RPL22A" "ribosomal protein" ytylr150w - 1,5,4,0 "STM1" "specific affinity for guanine-rich quadruplex nucleic acids" 10,1,99,0 "STM1" "specific affinity for guanine-rich quadruplex nucleic acids" ytylr249w - 30,1,0,0 "YEF3" "translation elongation factor eEF3" 40,3,0,0 "YEF3" "translation elongation factor eEF3" 5,4,0,0 "YEF3" "translation elongation factor eEF3" ytylr340w 40,3,0,0 "RPP0" "acidic ribosomal protein L10.e" 5,1,0,0 "RPP0" "acidic ribosomal protein L10.e" ytylr344w 40,3,0,0 "RPL26A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL26A" "60S large subunit ribosomal protein" ytylr448w 40,3,0,0 "RPL6B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL6B" "60S large subunit ribosomal protein" ytymr318c - 1,5,1,0 "null" "strong similarity to alcohol-dehydrogenase" 2,16,0,0 "null" "strong similarity to alcohol-dehydrogenase" ytynl067w 40,3,0,0 "RPL9B" "ribosomal protein L9.e.c14" 5,1,0,0 "RPL9B" "ribosomal protein L9.e.c14" ytynl178w 40,3,0,0 "RPS3" "ribosomal protein S3.e" 5,1,0,0 "RPS3" "ribosomal protein S3.e" ytynl301c 40,3,0,0 "RPL18B" "60S large subunit ribosomal protein L18.e" 5,1,0,0 "RPL18B" "60S large subunit ribosomal protein L18.e" ytyol120c 40,3,0,0 "RPL18A" "60S large subunit ribosomal protein S18.e" 5,1,0,0 "RPL18A" "60S large subunit ribosomal protein S18.e" ytyor234c 5,1,0,0 "RPL33B" "ribosomal protein L35a.e.c15" ytyor312c 40,3,0,0 "RPL20B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL20B" "60S large subunit ribosomal protein" ytyor369c 40,3,0,0 "RPS12" "40S small subunit acidic ribosomal protein S12" 5,1,0,0 "RPS12" "40S small subunit acidic ribosomal protein S12" ytypl131w 40,3,0,0 "RPL5" "60S large subunit ribosomal protein L5.e" 5,1,0,0 "RPL5" "60S large subunit ribosomal protein L5.e" ytypr132w 40,3,0,0 "RPS23B" "40S small subunit ribosomal protein S23.e" 5,1,0,0 "RPS23B" "40S small subunit ribosomal protein S23.e" Training Accuracy: 44/49 (89.80%) Training Frequency class '5/1/0/0': 82/1607 (5.10%) Evaluation on validation data (843 items): ytyal012w - 1,1,1,0 "CYS3" "cystathionine gamma-lyase" 40,3,0,0 "CYS3" "cystathionine gamma-lyase" ytyal038w - 1,5,1,0 "CDC19" "pyruvate kinase" 2,1,0,0 "CDC19" "pyruvate kinase" 40,3,0,0 "CDC19" "pyruvate kinase" ytybl076c - 40,3,0,0 "ILS1" "isoleucyl-tRNA synthetase" 5,10,0,0 "ILS1" "isoleucyl-tRNA synthetase" ytycl050c - 1,3,10,0 "APA1" "ATP adenylyltransferase I" ytydl130w 40,3,0,0 "RPP1B" "60S large subunit acidic ribosomal protein L44prime" 5,1,0,0 "RPP1B" "60S large subunit acidic ribosomal protein L44prime" ytydl136w 40,3,0,0 "RPL35B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL35B" "60S large subunit ribosomal protein" ytydr012w 40,3,0,0 "RPL4B" "ribosomal protein L4.e.B" 5,1,0,0 "RPL4B" "ribosomal protein L4.e.B" ytyel054c 40,3,0,0 "RPL12A" "60S large subunit ribosomal protein L12.e" 5,1,0,0 "RPL12A" "60S large subunit ribosomal protein L12.e" ytygl103w 40,3,0,0 "RPL28" "60S large subunit ribosomal protein L27a.e" 5,1,0,0 "RPL28" "60S large subunit ribosomal protein L27a.e" ytyhl001w 40,3,0,0 "RPL14B" "ribosomal protein" 5,1,0,0 "RPL14B" "ribosomal protein" ytyhl033c 40,3,0,0 "RPL8A" "60S large subunit ribosomal protein L7a.e.A" 5,1,0,0 "RPL8A" "60S large subunit ribosomal protein L7a.e.A" ytyhr203c 40,3,0,0 "RPS4B" "ribosomal protein S4.e.c8" 5,1,0,0 "RPS4B" "ribosomal protein S4.e.c8" ytyjl080c - 3,3,1,0 "SCP160" "required for maintenance of exact ploidy" 40,10,0,0 "SCP160" "required for maintenance of exact ploidy" 40,7,0,0 "SCP160" "required for maintenance of exact ploidy" ytyjl190c 40,3,0,0 "RPS22A" "ribosomal protein S15a.e.c10" 5,1,0,0 "RPS22A" "ribosomal protein S15a.e.c10" ytyjr145c 40,3,0,0 "RPS4A" "ribosomal protein S4.e.c10" 5,1,0,0 "RPS4A" "ribosomal protein S4.e.c10" ytylr044c - 1,5,1,0 "PDC1" "pyruvate decarboxylase, isozyme 1" 2,13,0,0 "PDC1" "pyruvate decarboxylase, isozyme 1" 2,16,0,0 "PDC1" "pyruvate decarboxylase, isozyme 1" 40,3,0,0 "PDC1" "pyruvate decarboxylase, isozyme 1" ytylr075w 3,3,1,0 "RPL10" "60S large subunit ribosomal protein" 40,3,0,0 "RPL10" "60S large subunit ribosomal protein" 5,1,0,0 "RPL10" "60S large subunit ribosomal protein" 6,10,0,0 "RPL10" "60S large subunit ribosomal protein" ytylr325c 40,3,0,0 "RPL38" "60S large subunit ribosomal protein" 5,1,0,0 "RPL38" "60S large subunit ribosomal protein" ytylr333c 40,3,0,0 "RPS25B" "ribosomal protein S25.e.c12" 5,1,0,0 "RPS25B" "ribosomal protein S25.e.c12" ytylr388w 40,3,0,0 "RPS29A" "ribosomal protein S29.e.A" 5,1,0,0 "RPS29A" "ribosomal protein S29.e.A" ytylr432w - 1,3,1,0 "IMD3" "strong similarity to IMP dehydrogenases, Pur5p and YML056c" ytylr441c 14,4,3,3 "RPS1A" "ribosomal protein S3a.e" 40,3,0,0 "RPS1A" "ribosomal protein S3a.e" 5,1,0,0 "RPS1A" "ribosomal protein S3a.e" ytynl096c 40,3,0,0 "RPS7B" "strong similarity to ribosomal protein S7" 5,1,0,0 "RPS7B" "strong similarity to ribosomal protein S7" ytynl162w 40,3,0,0 "RPL42A" "ribosomal protein L36a.e" 5,1,0,0 "RPL42A" "ribosomal protein L36a.e" ytynl302c 40,3,0,0 "RPS19B" "40S small subunit ribosomal protein S19.e" 5,1,0,0 "RPS19B" "40S small subunit ribosomal protein S19.e" ytyol121c 40,3,0,0 "RPS19A" "40S small subunit ribosomal protein S19.e" 5,1,0,0 "RPS19A" "40S small subunit ribosomal protein S19.e" ytyor153w - 1,6,13,0 "PDR5" "pleiotropic drug resistance protein" 11,7,0,0 "PDR5" "pleiotropic drug resistance protein" 13,1,1,1 "PDR5" "pleiotropic drug resistance protein" 40,2,0,0 "PDR5" "pleiotropic drug resistance protein" 67,4,1,2 "PDR5" "pleiotropic drug resistance protein" 67,50,25,0 "PDR5" "pleiotropic drug resistance protein" ytypr102c 40,3,0,0 "RPL11A" "ribosomal protein L11.e" 5,1,0,0 "RPL11A" "ribosomal protein L11.e" Validation Accuracy: 20/28 (71.43%) Validation Frequency class '5/1/0/0': 41/843 (4.86%) Evaluation on propertest data (1276 items): ytyar073w - 1,3,1,0 "IMD1" "strong similarity to IMP dehydrogenases" ytybl027w 40,3,0,0 "RPL19B" "60S large subunit ribosomal protein L19.e" 5,1,0,0 "RPL19B" "60S large subunit ribosomal protein L19.e" ytybl072c 40,3,0,0 "RPS8A" "ribosomal protein S8.e" 5,1,0,0 "RPS8A" "ribosomal protein S8.e" ytydl083c 40,3,0,0 "RPS16B" "ribosomal protein S16.e" 5,1,0,0 "RPS16B" "ribosomal protein S16.e" ytydl208w - 4,1,4,0 "NHP2" "nucleolar rRNA processing protein" 40,10,0,0 "NHP2" "nucleolar rRNA processing protein" ytydr418w 40,3,0,0 "RPL12B" "60S large subunit ribosomal protein L12.e" 5,1,0,0 "RPL12B" "60S large subunit ribosomal protein L12.e" ytyer074w 40,3,0,0 "RPS24A" "40s small subunit ribosomal protein S24.e" 5,1,0,0 "RPS24A" "40s small subunit ribosomal protein S24.e" ytygl031c 40,3,0,0 "RPL24A" "60S large subunit ribosomal protein L24.e.A" 5,1,0,0 "RPL24A" "60S large subunit ribosomal protein L24.e.A" ytygl123w 40,3,0,0 "RPS2" "40S small subunit ribosomal protein" 5,1,0,0 "RPS2" "40S small subunit ribosomal protein" ytygl135w 40,3,0,0 "RPL1B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL1B" "60S large subunit ribosomal protein" ytygr027c 40,3,0,0 "RPS25A" "ribosomal protein S25.e.c7" 5,1,0,0 "RPS25A" "ribosomal protein S25.e.c7" ytygr085c 40,3,0,0 "RPL11B" "ribosomal protein" 5,1,0,0 "RPL11B" "ribosomal protein" ytyhr089c - 4,1,4,0 "GAR1" "nucleolar rRNA processing protein" 40,10,0,0 "GAR1" "nucleolar rRNA processing protein" ytyhr216w - 1,3,1,0 "IMD2" "IMP dehydrogenase" ytyil069c 40,3,0,0 "RPS24B" "40S small subunit ribosomal protein S24.e" 5,1,0,0 "RPS24B" "40S small subunit ribosomal protein S24.e" ytyjl138c - 40,3,0,0 "TIF2" "translation initiation factor eIF4A" 5,4,0,0 "TIF2" "translation initiation factor eIF4A" ytykr059w - 40,3,0,0 "TIF1" "translation initiation factor 4A" 5,4,0,0 "TIF1" "translation initiation factor 4A" ytyll045c 40,3,0,0 "RPL8B" "60s large subunit ribosomal protein L7a.e.B" 5,1,0,0 "RPL8B" "60s large subunit ribosomal protein L7a.e.B" ytylr264w 40,3,0,0 "RPS28B" "40S small subunit ribosomal protein S28.e.c12" 5,1,0,0 "RPS28B" "40S small subunit ribosomal protein S28.e.c12" ytylr367w 40,3,0,0 "RPS22B" "ribosomal protein S15a.e.c12" 5,1,0,0 "RPS22B" "ribosomal protein S15a.e.c12" ytyml063w 40,3,0,0 "RPS1B" "ribosomal protein S3a.e" 5,1,0,0 "RPS1B" "ribosomal protein S3a.e" ytymr121c 40,3,0,0 "RPL15B" "60S large subunit ribosomal protein L15.e.c13" 5,1,0,0 "RPL15B" "60S large subunit ribosomal protein L15.e.c13" ytymr242c 40,3,0,0 "RPL20A" "60s large subunit ribosomal protein" 5,1,0,0 "RPL20A" "60s large subunit ribosomal protein" ytynl069c 40,3,0,0 "RPL16B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL16B" "60S large subunit ribosomal protein" ytynl119w 5,1,0,0 "null" "weak similarity to M.jannaschii hypothetical protein MJ1257" ytynl209w - 40,3,0,0 "SSB2" "heat shock protein of HSP70 family, cytosolic" 5,99,0,0 "SSB2" "heat shock protein of HSP70 family, cytosolic" ytyol039w 40,3,0,0 "RPP2A" "acidic ribosomal protein P2.beta" 5,1,0,0 "RPP2A" "acidic ribosomal protein P2.beta" ytyol040c 40,3,0,0 "RPS15" "40S small subunit ribosomal protein" 5,1,0,0 "RPS15" "40S small subunit ribosomal protein" ytyor063w 40,3,0,0 "RPL3" "60S large subunit ribosomal protein L3.e" 5,1,0,0 "RPL3" "60S large subunit ribosomal protein L3.e" ytypl220w 40,3,0,0 "RPL1A" "ribosomal protein" 5,1,0,0 "RPL1A" "ribosomal protein" Propertest Accuracy: 23/30 (76.67%) Propertest Frequency class '5/1/0/0': 68/1276 (5.33%) New (unknown) data (843 items): ytybr032w - 99,0,0,0 "null" "hypothetical protein" ytybr187w - 99,0,0,0 "null" "similarity to mouse putative transmembrane protein FT27" ytydr417c - 99,0,0,0 "null" "questionable ORF" ytygl102c - 99,0,0,0 "null" "questionable ORF" ytylr076c - 99,0,0,0 "null" "questionable ORF" ytylr198c - 99,0,0,0 "null" "questionable ORF" ytylr339c - 99,0,0,0 "null" "questionable ORF" ytylr413w - 99,0,0,0 "null" "strong similarity to YKL187c" ytyor309c - 99,0,0,0 "null" "questionable ORF" ytypl142c - 99,0,0,0 "null" "questionable ORF" ------------------ Rule 1316: g1 > 4106 g2 > 4611 g3_ratio > 0.6 r7_ratio > 1.85 g7dashbkg <= 7743 -> class 40/16/0/0 "mitochondrion" Evaluation on training data (1607 items): ytybl015w - 1,6,10,0 "ACH1" "acetyl-CoA hydrolase" 14,4,3,5 "ACH1" "acetyl-CoA hydrolase" 40,3,0,0 "ACH1" "acetyl-CoA hydrolase" ytycl008c - 6,13,4,0 "STP22" "required for vacuolar targeting of temperature-sensitive plasma membrane proteins, STE2P and CAN1P" 8,13,0,0 "STP22" "required for vacuolar targeting of temperature-sensitive plasma membrane proteins, STE2P and CAN1P" ytycl035c - 11,1,0,0 "GRX1" "glutaredoxin" 11,7,0,0 "GRX1" "glutaredoxin" ytycr039c - 14,4,3,3 "MATALPHA2" "mating type regulatory protein, expressed copy at MAT locus" 4,5,1,4 "MATALPHA2" "mating type regulatory protein, expressed copy at MAT locus" 40,10,0,0 "MATALPHA2" "mating type regulatory protein, expressed copy at MAT locus" ytydl004w 13,1,1,3 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 2,13,0,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 40,16,0,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 67,50,22,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 8,4,0,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" ytydl022w - 1,5,1,0 "GPD1" "glycerol-3-phosphate dehydrogenase (NAD+), cytoplasmic" 11,1,0,0 "GPD1" "glycerol-3-phosphate dehydrogenase (NAD+), cytoplasmic" 13,11,3,13 "GPD1" "glycerol-3-phosphate dehydrogenase (NAD+), cytoplasmic" 40,3,0,0 "GPD1" "glycerol-3-phosphate dehydrogenase (NAD+), cytoplasmic" ytydl067c 2,13,0,0 "COX9" "cytochrome-c oxidase chain VIIA" 40,16,0,0 "COX9" "cytochrome-c oxidase chain VIIA" 6,10,0,0 "COX9" "cytochrome-c oxidase chain VIIA" ytydr074w 1,5,1,0 "TPS2" "alpha,alpha-trehalose-phosphate synthase, 102 KD subunit" 11,1,0,0 "TPS2" "alpha,alpha-trehalose-phosphate synthase, 102 KD subunit" 2,19,0,0 "TPS2" "alpha,alpha-trehalose-phosphate synthase, 102 KD subunit" 40,16,0,0 "TPS2" "alpha,alpha-trehalose-phosphate synthase, 102 KD subunit" 40,3,0,0 "TPS2" "alpha,alpha-trehalose-phosphate synthase, 102 KD subunit" ytydr258c 11,1,0,0 "HSP78" "heat shock protein of clpb family of ATP-dependent proteases, mitochondrial" 40,16,0,0 "HSP78" "heat shock protein of clpb family of ATP-dependent proteases, mitochondrial" 6,99,0,0 "HSP78" "heat shock protein of clpb family of ATP-dependent proteases, mitochondrial" ytydr377w 2,13,0,0 "ATP17" "ATP synthase complex, subunit f" 40,16,0,0 "ATP17" "ATP synthase complex, subunit f" 6,10,0,0 "ATP17" "ATP synthase complex, subunit f" ytydr529c 2,13,0,0 "QCR7" "ubiquinol--cytochrome-c reductase subunit 7" 40,16,0,0 "QCR7" "ubiquinol--cytochrome-c reductase subunit 7" 6,10,0,0 "QCR7" "ubiquinol--cytochrome-c reductase subunit 7" ytyel024w 2,13,0,0 "RIP1" "ubiquinol--cytochrome-c reductase iron-sulfur protein precursor" 40,16,0,0 "RIP1" "ubiquinol--cytochrome-c reductase iron-sulfur protein precursor" ytygl191w 2,13,0,0 "COX13" "cytochrome-c oxidase chain VIa" 40,16,0,0 "COX13" "cytochrome-c oxidase chain VIa" ytyhr055c - 11,7,0,0 "CUP1-2" "metallothionein" 40,3,0,0 "CUP1-2" "metallothionein" ytyjr121w 13,1,1,3 "ATP2" "F1F0-ATPase complex, F1 beta subunit" 2,13,0,0 "ATP2" "F1F0-ATPase complex, F1 beta subunit" 40,16,0,0 "ATP2" "F1F0-ATPase complex, F1 beta subunit" 67,50,22,0 "ATP2" "F1F0-ATPase complex, F1 beta subunit" 8,4,0,0 "ATP2" "F1F0-ATPase complex, F1 beta subunit" ytyjr155w - 1,5,1,0 "AAD10" "strong similarity to aryl-alcohol dehydrogenase" 2,16,0,0 "AAD10" "strong similarity to aryl-alcohol dehydrogenase" ytykl016c 13,1,1,3 "ATP7" "F1F0-ATPase complex, FO D subunit" 2,13,0,0 "ATP7" "F1F0-ATPase complex, FO D subunit" 40,16,0,0 "ATP7" "F1F0-ATPase complex, FO D subunit" 67,50,22,0 "ATP7" "F1F0-ATPase complex, FO D subunit" 8,4,0,0 "ATP7" "F1F0-ATPase complex, FO D subunit" ytykl141w 2,13,0,0 "SDH3" "cytochrome b560 subunit of respiratory complex II" 40,16,0,0 "SDH3" "cytochrome b560 subunit of respiratory complex II" ytykl148c 1,5,1,0 "SDH1" "succinate dehydrogenase flavoprotein precursor" 2,10,0,0 "SDH1" "succinate dehydrogenase flavoprotein precursor" 40,16,0,0 "SDH1" "succinate dehydrogenase flavoprotein precursor" ytykl150w 2,13,0,0 "MCR1" "cytochrome-b5 reductase" 40,16,0,0 "MCR1" "cytochrome-b5 reductase" ytykl163w - 11,1,0,0 "PIR3" "member of the PIR1P/Pir2p/PIR3P family" 40,1,0,0 "PIR3" "member of the PIR1P/Pir2p/PIR3P family" ytykr067w - 67,99,0,0 "GPT2" "strong similarity to SCT1P" ytyll026w - 11,1,0,0 "HSP104" "heat shock protein" 40,3,0,0 "HSP104" "heat shock protein" 6,99,0,0 "HSP104" "heat shock protein" ytylr259c 11,1,0,0 "HSP60" "heat shock protein - chaperone, mitochondrial" 40,16,0,0 "HSP60" "heat shock protein - chaperone, mitochondrial" 6,1,0,0 "HSP60" "heat shock protein - chaperone, mitochondrial" ytylr295c 13,1,1,3 "ATP14" "F1F0-ATPase complex, subunit h" 2,13,0,0 "ATP14" "F1F0-ATPase complex, subunit h" 40,16,0,0 "ATP14" "F1F0-ATPase complex, subunit h" 67,50,22,0 "ATP14" "F1F0-ATPase complex, subunit h" 8,4,0,0 "ATP14" "F1F0-ATPase complex, subunit h" ytyml100w - 1,5,1,0 "TSL1" "alpha,alpha-trehalose-phosphate synthase, 123 KD subunit" 2,19,0,0 "TSL1" "alpha,alpha-trehalose-phosphate synthase, 123 KD subunit" 40,3,0,0 "TSL1" "alpha,alpha-trehalose-phosphate synthase, 123 KD subunit" ytyml120c 2,13,0,0 "NDI1" "NADH-ubiquinone-6 oxidoreductase" 40,16,0,0 "NDI1" "NADH-ubiquinone-6 oxidoreductase" ytymr145c 2,13,0,0 "NDH1" "mitochondrial cytosolically directed NADH dehydrogenase" 40,16,0,0 "NDH1" "mitochondrial cytosolically directed NADH dehydrogenase" ytymr186w - 11,1,0,0 "HSC82" "heat shock protein" 40,3,0,0 "HSC82" "heat shock protein" ytymr311c - 1,5,4,0 "GLC8" "regulatory subunit for protein ser/thr phosphatase GLC7P" ytynl052w 2,13,0,0 "COX5A" "cytochrome-c oxidase chain V.A precursor" 40,16,0,0 "COX5A" "cytochrome-c oxidase chain V.A precursor" ytynr002c - 1,5,4,0 "FUN34" "strong similarity to Y.lipolytica glyoxylate pathway regulator GPR1" ytyor136w 1,5,1,0 "IDH2" "isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial" 2,10,0,0 "IDH2" "isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial" 4,99,0,0 "IDH2" "isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial" 40,16,0,0 "IDH2" "isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial" ytypl135w - 1,2,1,0 "ISU1" "strong similarity to nitrogen fixation protein (nifU)" ytypl223c - 11,1,0,0 "GRE1" "induced by osmotic stress" ytypl265w - 1,1,7,0 "DIP5" "dicarboxylic amino acid permease" 40,2,0,0 "DIP5" "dicarboxylic amino acid permease" 67,10,0,0 "DIP5" "dicarboxylic amino acid permease" ytydr258c 11,1,0,0 "HSP78" "heat shock protein of clpb family of ATP-dependent proteases, mitochondrial" 40,16,0,0 "HSP78" "heat shock protein of clpb family of ATP-dependent proteases, mitochondrial" 6,99,0,0 "HSP78" "heat shock protein of clpb family of ATP-dependent proteases, mitochondrial" Training Accuracy: 20/37 (54.05%) Training Frequency class '40/16/0/0': 136/1607 (8.46%) Evaluation on validation data (843 items): ytyal060w - 1,5,1,0 "BDH1" "stereospecific (2R, 3R)-2,3-butanediol dehydrogenase" ytybl066c - 14,4,3,5 "SEF1" "putative transcription factor" 4,5,1,4 "SEF1" "putative transcription factor" 40,10,0,0 "SEF1" "putative transcription factor" ytybl075c - 11,1,0,0 "SSA3" "heat shock protein of HSP70 family, cytosolic" 40,3,0,0 "SSA3" "heat shock protein of HSP70 family, cytosolic" ytybr067c - 1,6,99,0 "TIP1" "esterase" 11,1,0,0 "TIP1" "esterase" 40,1,0,0 "TIP1" "esterase" ytybr149w - 1,5,1,0 "ARA1" "D-arabinose dehydrogenase, large subunit" ytybr222c - 1,6,1,0 "FAT2" "AMP-binding protein, peroxisomal" 40,19,0,0 "FAT2" "AMP-binding protein, peroxisomal" ytyfr033c 2,13,0,0 "QCR6" "ubiquinol--cytochrome-c reductase 17K protein" 40,16,0,0 "QCR6" "ubiquinol--cytochrome-c reductase 17K protein" ytyhr053c - 11,7,0,0 "CUP1-1" "metallothionein" 40,3,0,0 "CUP1-1" "metallothionein" ytyil125w 1,5,1,0 "KGD1" "2-oxoglutarate dehydrogenase complex E1 component" 2,10,0,0 "KGD1" "2-oxoglutarate dehydrogenase complex E1 component" 40,16,0,0 "KGD1" "2-oxoglutarate dehydrogenase complex E1 component" ytyjr077c 1,4,7,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 13,1,3,3 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 40,16,0,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 67,4,7,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 8,4,0,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" ytykr046c - 2,13,0,0 "null" "hypothetical protein" 3,3,2,0 "null" "hypothetical protein" ytylr093c - 40,25,0,0 "NYV1" "v-SNARE, vacuolar" 6,10,0,0 "NYV1" "v-SNARE, vacuolar" ytylr304c 1,5,1,0 "ACO1" "aconitate hydratase" 2,10,0,0 "ACO1" "aconitate hydratase" 2,22,0,0 "ACO1" "aconitate hydratase" 40,16,0,0 "ACO1" "aconitate hydratase" 40,3,0,0 "ACO1" "aconitate hydratase" ytynl134c - 40,3,0,0 "null" "similarity to C.carbonum toxD gene" ytynr001c 1,5,1,0 "CIT1" "citrate (si)-synthase, mitochondrial" 2,10,0,0 "CIT1" "citrate (si)-synthase, mitochondrial" 40,16,0,0 "CIT1" "citrate (si)-synthase, mitochondrial" ytyor027w - 11,1,0,0 "STI1" "stress-induced protein" 14,1,0,0 "STI1" "stress-induced protein" ytyor065w 2,13,0,0 "CYT1" "cytochrome-c1" 40,16,0,0 "CYT1" "cytochrome-c1" ytyor285w - 6,4,0,0 "null" "similarity to D.melanogaster heat shock protein 67B2" ytyor303w - 1,1,1,0 "CPA1" "arginine-specific carbamoylphosphate synthase, small chain" 40,3,0,0 "CPA1" "arginine-specific carbamoylphosphate synthase, small chain" ytyor317w - 1,6,1,0 "FAA1" "long-chain-fatty-acid--CoA ligase" 1,6,7,0 "FAA1" "long-chain-fatty-acid--CoA ligase" ytypl078c 13,1,1,3 "ATP4" "F1F0-ATPase complex, F0 subunit B" 2,13,0,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" 40,16,0,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" 67,50,22,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" 8,4,0,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" ytypl230w - 4,99,0,0 "USV1" "similarity to RGM1P, weak similarity to transcription factors" ytypr149w - 8,16,0,0 "NCE102" "involved in non-classical protein export pathway" Validation Accuracy: 7/23 (30.43%) Validation Frequency class '40/16/0/0': 75/843 (8.90%) Evaluation on propertest data (1276 items): ytybr218c - 1,5,1,0 "PYC2" "pyruvate carboxylase 2" 2,1,0,0 "PYC2" "pyruvate carboxylase 2" 40,3,0,0 "PYC2" "pyruvate carboxylase 2" ytybl045c 2,13,0,0 "COR1" "ubiquinol--cytochrome-c reductase 44K core protein" 40,16,0,0 "COR1" "ubiquinol--cytochrome-c reductase 44K core protein" ytybr072w - 11,1,0,0 "HSP26" "heat shock protein" 40,10,0,0 "HSP26" "heat shock protein" 40,3,0,0 "HSP26" "heat shock protein" ytybr139w - 6,13,0,0 "null" "strong similarity to carboxypeptidase" ytybr212w - 14,1,0,0 "NGR1" "glucose-repressible RNA-binding protein" 4,99,0,0 "NGR1" "glucose-repressible RNA-binding protein" ytybr218c - 1,5,1,0 "PYC2" "pyruvate carboxylase 2" 2,1,0,0 "PYC2" "pyruvate carboxylase 2" 40,3,0,0 "PYC2" "pyruvate carboxylase 2" ytydl215c - 1,1,10,0 "GDH2" "NAD-specific glutamate dehydrogenase (NAD)" 1,2,1,0 "GDH2" "NAD-specific glutamate dehydrogenase (NAD)" 40,3,0,0 "GDH2" "NAD-specific glutamate dehydrogenase (NAD)" ytydr298c 13,1,1,3 "ATP5" "F1F0-ATPase complex, OSCP subunit" 2,13,0,0 "ATP5" "F1F0-ATPase complex, OSCP subunit" 40,16,0,0 "ATP5" "F1F0-ATPase complex, OSCP subunit" 67,50,22,0 "ATP5" "F1F0-ATPase complex, OSCP subunit" 8,4,0,0 "ATP5" "F1F0-ATPase complex, OSCP subunit" ytydr513w - 1,3,7,0 "TTR1" "glutaredoxin" 11,1,0,0 "TTR1" "glutaredoxin" 11,7,0,0 "TTR1" "glutaredoxin" 40,3,0,0 "TTR1" "glutaredoxin" ytyfl014w - 1,5,1,0 "HSP12" "heat shock protein" 1,6,7,0 "HSP12" "heat shock protein" 11,1,0,0 "HSP12" "heat shock protein" 13,11,3,13 "HSP12" "heat shock protein" 3,1,5,1 "HSP12" "heat shock protein" ytygl006w - 13,1,1,99 "PMC1" "Ca2+-transporting P-type ATPase" 40,25,0,0 "PMC1" "Ca2+-transporting P-type ATPase" 67,4,1,2 "PMC1" "Ca2+-transporting P-type ATPase" 67,50,22,0 "PMC1" "Ca2+-transporting P-type ATPase" 8,13,0,0 "PMC1" "Ca2+-transporting P-type ATPase" ytygl062w - 1,5,1,0 "PYC1" "pyruvate carboxylase 1" 2,1,0,0 "PYC1" "pyruvate carboxylase 1" 40,3,0,0 "PYC1" "pyruvate carboxylase 1" ytygl187c 2,13,0,0 "COX4" "cytochrome-c oxidase chain IV" 40,16,0,0 "COX4" "cytochrome-c oxidase chain IV" ytygr008c 2,13,0,0 "STF2" "ATPase stabilizing factor" 30,1,0,0 "STF2" "ATPase stabilizing factor" 40,16,0,0 "STF2" "ATPase stabilizing factor" ytygr088w - 11,1,0,0 "CTT1" "catalase T, cytosolic" 11,7,0,0 "CTT1" "catalase T, cytosolic" 40,3,0,0 "CTT1" "catalase T, cytosolic" ytyhr051w 2,13,0,0 "COX6" "cytochrome-c oxidase subunit VI" 40,16,0,0 "COX6" "cytochrome-c oxidase subunit VI" ytyhr104w - 1,5,1,0 "GRE3" "aldose reductase" 11,1,0,0 "GRE3" "aldose reductase" ytykl067w - 1,3,99,0 "YNK1" "nucleoside diphosphate kinase" 40,3,0,0 "YNK1" "nucleoside diphosphate kinase" ytykl157w - 1,1,99,0 "APE2" "aminopeptidase yscII" 40,27,0,0 "APE2" "aminopeptidase yscII" 6,7,0,0 "APE2" "aminopeptidase yscII" ytylr038c 2,13,0,0 "COX12" "cytochrome-c oxidase, subunit VIB" 40,16,0,0 "COX12" "cytochrome-c oxidase, subunit VIB" 6,10,0,0 "COX12" "cytochrome-c oxidase, subunit VIB" ytylr164w - 1,5,1,0 "null" "strong similarity to SDH4P" 2,10,0,0 "null" "strong similarity to SDH4P" ytylr178c - 13,11,3,1 "TFS1" "CDC25-dependent nutrient- and ammonia-response cell-cycle regulator" 3,3,1,0 "TFS1" "CDC25-dependent nutrient- and ammonia-response cell-cycle regulator" ytylr216c - 4,5,1,4 "CPR6" "member of the cyclophilin family" 40,3,0,0 "CPR6" "member of the cyclophilin family" 6,1,0,0 "CPR6" "member of the cyclophilin family" ytylr258w - 1,5,1,0 "GSY2" "UDP-glucose--starch glucosyltransferase, isoform 2" 1,5,4,0 "GSY2" "UDP-glucose--starch glucosyltransferase, isoform 2" 2,19,0,0 "GSY2" "UDP-glucose--starch glucosyltransferase, isoform 2" 40,3,0,0 "GSY2" "UDP-glucose--starch glucosyltransferase, isoform 2" ytylr356w - 3,3,1,0 "null" "similarity to SCM4 protein" ytylr395c 2,13,0,0 "COX8" "cytochrome-c oxidase chain VIII" 40,16,0,0 "COX8" "cytochrome-c oxidase chain VIII" ytyml004c - 1,1,10,0 "GLO1" "glyoxalase I" ytyml091c 4,3,3,0 "RPM2" "ribonuclease P precursor, mitochondrial" 40,16,0,0 "RPM2" "ribonuclease P precursor, mitochondrial" ytynl036w - 8,16,0,0 "NCE103" "involved in non-classical protein export pathway" ytynl037c 1,5,1,0 "IDH1" "isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial" 2,10,0,0 "IDH1" "isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial" 4,99,0,0 "IDH1" "isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial" 40,16,0,0 "IDH1" "isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial" ytynl045w - 1,6,1,0 "null" "strong similarity to human leukotriene-A4 hydrolase" ytypl147w - 1,6,13,0 "PXA1" "long-chain fatty acid transporter" 40,19,0,0 "PXA1" "long-chain fatty acid transporter" 67,13,0,0 "PXA1" "long-chain fatty acid transporter" 67,50,25,0 "PXA1" "long-chain fatty acid transporter" 8,10,0,0 "PXA1" "long-chain fatty acid transporter" ytypl262w 2,10,0,0 "FUM1" "fumarate hydratase" 40,16,0,0 "FUM1" "fumarate hydratase" 40,3,0,0 "FUM1" "fumarate hydratase" ytypr020w 2,13,0,0 "ATP20" "subunit G of the dimeric form of mitochondrial F1F0-ATP Synthase" 40,16,0,0 "ATP20" "subunit G of the dimeric form of mitochondrial F1F0-ATP Synthase" ytypr026w - 1,5,1,0 "ATH1" "acid trehalase, vacuolar" 11,1,0,0 "ATH1" "acid trehalase, vacuolar" 2,19,0,0 "ATH1" "acid trehalase, vacuolar" 40,25,0,0 "ATH1" "acid trehalase, vacuolar" ytydl215c - 1,1,10,0 "GDH2" "NAD-specific glutamate dehydrogenase (NAD)" 1,2,1,0 "GDH2" "NAD-specific glutamate dehydrogenase (NAD)" 40,3,0,0 "GDH2" "NAD-specific glutamate dehydrogenase (NAD)" Propertest Accuracy: 11/36 (30.56%) Propertest Frequency class '40/16/0/0': 119/1276 (9.33%) New (unknown) data (843 items): ytybl100c - 99,0,0,0 "null" "questionable ORF" ytybl107c - 99,0,0,0 "null" "hypothetical protein" ytybl108w - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytybr053c - 99,0,0,0 "null" "similarity to rat regucalcin" ytybr230c - 99,0,0,0 "null" "hypothetical protein" ytydl023c - 99,0,0,0 "null" "questionable ORF" ytydl079c - 98,0,0,0 "MRK1" "ser/thr protein kinase" ytydr070c - 99,0,0,0 "null" "hypothetical protein" ytydr262w - 99,0,0,0 "null" "hypothetical protein" ytydr505c - 98,0,0,0 "PSP1" "high copy suppressor of ts mutations in DNA polymerase alpha" ytyer004w - 99,0,0,0 "null" "similarity to hypothetical E.coli and C.elegans proteins" ytygl037c - 99,0,0,0 "PNC1" "similarity to PIR:B70386 pyrazinamidase/nicotinamidase - Aquifex aeolicus" ytygl121c - 99,0,0,0 "null" "hypothetical protein" ytygr086c - 99,0,0,0 "null" "strong similarity to hypothetical protein YPL004c" ytygr146c - 99,0,0,0 "null" "hypothetical protein" ytygr182c - 99,0,0,0 "null" "questionable ORF" ytyhr138c - 99,0,0,0 "null" "hypothetical protein" ytyhr162w - 99,0,0,0 "null" "strong similarity to hypothetical protein YGR243w" ytyll020c - 99,0,0,0 "null" "questionable ORF" ytylr217w - 99,0,0,0 "null" "questionable ORF" ytylr294c - 99,0,0,0 "null" "questionable ORF" ytymr148w - 99,0,0,0 "null" "hypothetical protein" ytymr191w - 99,0,0,0 "null" "hypothetical protein" ytyor007c - 99,0,0,0 "SGT2" "similarity to protein phosphatases" ytyor135c - 99,0,0,0 "null" "questionable ORF" ytyor374w - 98,0,0,0 "ALD4" "aldehyde dehydrogenase, mitochondrial" ytyor383c - 98,0,0,0 "FIT3" "weak similarity to L.mexicana secreted acid phosphatase 2" ytypl004c - 99,0,0,0 "null" "strong similarity to YGR086c" ytypr098c - 99,0,0,0 "null" "hypothetical protein" ytypr172w - 99,0,0,0 "null" "strong similarity to YLR456w" ------------------ Rule 1348: g1_ratio <= 0.97 r2_ratio <= 1.27 g7dashbkg > 7743 -> class 40/3/0/0 "cytoplasm" Evaluation on training data (1607 items): ytyal003w 40,3,0,0 "EFB1" "translation elongation factor eEF1beta" 5,4,2,0 "EFB1" "translation elongation factor eEF1beta" ytyal004w - 1,1,1,0 "null" "strong similarity to A.klebsiana glutamate dehydrogenase" ytyal005c 11,1,0,0 "SSA1" "heat shock protein of HSP70 family, cytosolic" 40,3,0,0 "SSA1" "heat shock protein of HSP70 family, cytosolic" 6,1,0,0 "SSA1" "heat shock protein of HSP70 family, cytosolic" 6,4,0,0 "SSA1" "heat shock protein of HSP70 family, cytosolic" 8,1,0,0 "SSA1" "heat shock protein of HSP70 family, cytosolic" ytyal035w 40,3,0,0 "FUN12" "general translation factor eIF2 homolog" 5,4,1,0 "FUN12" "general translation factor eIF2 homolog" ytybl003c - 4,5,1,4 "HTA2" "histone H2A.2" 40,10,3,0 "HTA2" "histone H2A.2" ytybl087c 40,3,0,0 "RPL23A" "60S large subunit ribosomal protein L23.e" 5,1,0,0 "RPL23A" "60S large subunit ribosomal protein L23.e" ytybl092w 40,3,0,0 "RPL32" "60S large subunit ribosomal protein L32.e" 5,1,0,0 "RPL32" "60S large subunit ribosomal protein L32.e" ytybr031w 40,3,0,0 "RPL4A" "ribosomal protein" 5,1,0,0 "RPL4A" "ribosomal protein" ytybr078w - 14,4,3,5 "ECM33" "involved in cell wall biogenesis and architecture" 3,3,2,0 "ECM33" "involved in cell wall biogenesis and architecture" 30,1,0,0 "ECM33" "involved in cell wall biogenesis and architecture" ytybr145w - 1,5,1,0 "ADH5" "alcohol dehydrogenase V" 11,7,0,0 "ADH5" "alcohol dehydrogenase V" 2,16,0,0 "ADH5" "alcohol dehydrogenase V" ytybr181c 40,3,0,0 "RPS6B" "ribosomal protein S6.e" 5,1,0,0 "RPS6B" "ribosomal protein S6.e" ytybr191w 40,3,0,0 "RPL21A" "ribosomal protein L21.e" 5,1,0,0 "RPL21A" "ribosomal protein L21.e" ytybr249c 1,1,1,0 "ARO4" "2-dehydro-3-deoxyphosphoheptonate aldolase, tyrosine-inhibited" 40,3,0,0 "ARO4" "2-dehydro-3-deoxyphosphoheptonate aldolase, tyrosine-inhibited" ytycr012w 1,5,1,0 "PGK1" "phosphoglycerate kinase" 2,1,0,0 "PGK1" "phosphoglycerate kinase" 40,3,0,0 "PGK1" "phosphoglycerate kinase" ytydl061c 40,3,0,0 "RPS29B" "ribosomal protein S29.e.B" 5,1,0,0 "RPS29B" "ribosomal protein S29.e.B" ytydl075w 40,3,0,0 "RPL31A" "60S large subunit ribosomal protein L31.e" 5,1,0,0 "RPL31A" "60S large subunit ribosomal protein L31.e" ytydl082w 40,3,0,0 "RPL13A" "60S large subunit ribosomal protein L13" 5,1,0,0 "RPL13A" "60S large subunit ribosomal protein L13" ytydl131w - 1,1,1,0 "LYS21" "homocitrate synthase" 1,5,1,0 "LYS21" "homocitrate synthase" 40,10,0,0 "LYS21" "homocitrate synthase" ytydl191w 40,3,0,0 "RPL35A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL35A" "60S large subunit ribosomal protein" ytydl229w 40,3,0,0 "SSB1" "heat shock protein of HSP70 family" 5,99,0,0 "SSB1" "heat shock protein of HSP70 family" ytydr002w 4,7,0,0 "YRB1" "ran-specific GTPase-activating protein" 40,3,0,0 "YRB1" "ran-specific GTPase-activating protein" 8,1,0,0 "YRB1" "ran-specific GTPase-activating protein" ytydr025w 40,3,0,0 "RPS11A" "ribosomal protein S11.e" 5,1,0,0 "RPS11A" "ribosomal protein S11.e" ytydr134c - 40,1,0,0 "null" "strong similarity to FLO1P, FLO5P, FLO9P and YLR110c" ytydr180w - 3,3,1,0 "SCC2" "involved in sister chromatid cohesion" 40,10,0,0 "SCC2" "involved in sister chromatid cohesion" ytydr385w 40,3,0,0 "EFT2" "translation elongation factor eEF2" 5,4,0,0 "EFT2" "translation elongation factor eEF2" ytydr447c 40,3,0,0 "RPS17B" "ribosomal protein S17.e.B" 5,1,0,0 "RPS17B" "ribosomal protein S17.e.B" ytydr450w 40,3,0,0 "RPS18A" "ribosomal protein S18.e.c4" 5,1,0,0 "RPS18A" "ribosomal protein S18.e.c4" ytydr500c 40,3,0,0 "RPL37B" "ribosomal protein L.37.e" 5,1,0,0 "RPL37B" "ribosomal protein L.37.e" ytyer117w 40,3,0,0 "RPL23B" "ribosomal protein L23.e" 5,1,0,0 "RPL23B" "ribosomal protein L23.e" ytyer131w 40,3,0,0 "RPS26B" "40S small subunit ribosomal protein S26e-c5" 5,1,0,0 "RPS26B" "40S small subunit ribosomal protein S26e-c5" ytyer177w - 10,1,1,0 "BMH1" "14-3-3 protein involved in rapamycin-sensitive signalling" 14,1,0,0 "BMH1" "14-3-3 protein involved in rapamycin-sensitive signalling" 3,3,1,3 "BMH1" "14-3-3 protein involved in rapamycin-sensitive signalling" ytyfl039c - 14,4,3,1 "ACT1" "actin" 3,3,1,0 "ACT1" "actin" 40,4,0,0 "ACT1" "actin" 8,19,0,0 "ACT1" "actin" ytygl076c 40,3,0,0 "RPL7A" "60S large subunit ribosomal protein L7.e.A" 5,1,0,0 "RPL7A" "60S large subunit ribosomal protein L7.e.A" ytygl189c 40,3,0,0 "RPS26A" "40S small subunit ribosomal protein S26e.c7" 5,1,0,0 "RPS26A" "40S small subunit ribosomal protein S26e.c7" ytygr061c 1,3,1,0 "ADE6" "5'-phosphoribosylformyl glycinamidine synthetase" 40,3,0,0 "ADE6" "5'-phosphoribosylformyl glycinamidine synthetase" ytygr094w 40,16,0,0 "VAS1" "valyl-tRNA synthetase" 40,3,0,0 "VAS1" "valyl-tRNA synthetase" 5,10,0,0 "VAS1" "valyl-tRNA synthetase" ytygr148c 40,3,0,0 "RPL24B" "60S large subunit ribosomal protein L24.e.B" 5,1,0,0 "RPL24B" "60S large subunit ribosomal protein L24.e.B" ytygr214w 14,4,3,1 "RPS0A" "40S ribosomal protein p40 homolog A" 40,3,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" 5,1,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" 6,10,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" ytyhl015w 40,3,0,0 "RPS20" "ribosomal protein" 5,1,0,0 "RPS20" "ribosomal protein" ytyhr174w 1,5,1,0 "ENO2" "enolase II (2-phosphoglycerate dehydratase)" 2,1,0,0 "ENO2" "enolase II (2-phosphoglycerate dehydratase)" 40,3,0,0 "ENO2" "enolase II (2-phosphoglycerate dehydratase)" ytyhr204w - 1,5,1,0 "HTM1" "similarity to alpha-mannosidases" ytyil018w 40,3,0,0 "RPL2B" "60S large subunit ribosomal protein L8.e" 5,1,0,0 "RPL2B" "60S large subunit ribosomal protein L8.e" ytyil051c - 30,16,0,0 "MMF1" "required for maintenance of mitochondrial DNA" ytyil052c 40,3,0,0 "RPL34B" "ribosomal protein L34.e" 5,1,0,0 "RPL34B" "ribosomal protein L34.e" ytyil078w 1,3,16,0 "THS1" "threonyl tRNA synthetase, cytosolic" 40,3,0,0 "THS1" "threonyl tRNA synthetase, cytosolic" 5,10,0,0 "THS1" "threonyl tRNA synthetase, cytosolic" ytyil133c 40,3,0,0 "RPL16A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL16A" "60S large subunit ribosomal protein" ytyjl177w 40,3,0,0 "RPL17B" "60s large subunit ribosomal protein L17.e" 5,1,0,0 "RPL17B" "60s large subunit ribosomal protein L17.e" ytyjr045c - 11,1,0,0 "SSC1" "mitochondrial heat shock protein 70-related protein" 40,16,0,0 "SSC1" "mitochondrial heat shock protein 70-related protein" 6,1,0,0 "SSC1" "mitochondrial heat shock protein 70-related protein" 8,4,0,0 "SSC1" "mitochondrial heat shock protein 70-related protein" ytyjr123w 40,3,0,0 "RPS5" "ribosomal protein S5.e" 5,1,0,0 "RPS5" "ribosomal protein S5.e" ytykl006w 40,3,0,0 "RPL14A" "ribosomal protein" 5,1,0,0 "RPL14A" "ribosomal protein" ytykl056c 40,3,0,0 "null" "strong similarity to human IgE-dependent histamine-releasing factor" 5,1,0,0 "null" "strong similarity to human IgE-dependent histamine-releasing factor" ytykl081w 40,3,0,0 "TEF4" "translation elongation factor eEF1, gamma chain" 5,4,0,0 "TEF4" "translation elongation factor eEF1, gamma chain" ytykr057w 40,3,0,0 "RPS21A" "ribosomal protein S21.e" 5,1,0,0 "RPS21A" "ribosomal protein S21.e" ytylr029c 40,3,0,0 "RPL15A" "60s large subunit ribosomal protein L15.e.c12" 5,1,0,0 "RPL15A" "60s large subunit ribosomal protein L15.e.c12" ytylr048w 40,3,0,0 "RPS0B" "40S ribosomal protein p40 homolog B" 5,1,0,0 "RPS0B" "40S ribosomal protein p40 homolog B" 6,10,0,0 "RPS0B" "40S ribosomal protein p40 homolog B" ytylr061w - 5,1,0,0 "RPL22A" "ribosomal protein" ytylr150w - 1,5,4,0 "STM1" "specific affinity for guanine-rich quadruplex nucleic acids" 10,1,99,0 "STM1" "specific affinity for guanine-rich quadruplex nucleic acids" ytylr167w 40,3,0,0 "RPS31" "ubiquitin/40S small subunit ribosomal protein" 5,1,0,0 "RPS31" "ubiquitin/40S small subunit ribosomal protein" 6,13,1,0 "RPS31" "ubiquitin/40S small subunit ribosomal protein" ytylr180w - 1,1,1,0 "SAM1" "S-adenosylmethionine synthetase 1" 1,1,10,0 "SAM1" "S-adenosylmethionine synthetase 1" ytylr249w 30,1,0,0 "YEF3" "translation elongation factor eEF3" 40,3,0,0 "YEF3" "translation elongation factor eEF3" 5,4,0,0 "YEF3" "translation elongation factor eEF3" ytylr293c 4,7,0,0 "GSP1" "GTP-binding protein of the ras superfamily" 40,10,0,0 "GSP1" "GTP-binding protein of the ras superfamily" 40,3,0,0 "GSP1" "GTP-binding protein of the ras superfamily" 8,1,0,0 "GSP1" "GTP-binding protein of the ras superfamily" ytylr340w 40,3,0,0 "RPP0" "acidic ribosomal protein L10.e" 5,1,0,0 "RPP0" "acidic ribosomal protein L10.e" ytylr448w 40,3,0,0 "RPL6B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL6B" "60S large subunit ribosomal protein" ytyml028w 11,7,0,0 "TSA1" "thiol-specific antioxidant" 40,3,0,0 "TSA1" "thiol-specific antioxidant" ytymr205c 1,5,1,0 "PFK2" "6-phosphofructokinase, beta subunit" 1,5,4,0 "PFK2" "6-phosphofructokinase, beta subunit" 2,1,0,0 "PFK2" "6-phosphofructokinase, beta subunit" 40,3,0,0 "PFK2" "6-phosphofructokinase, beta subunit" ytymr303c 1,5,1,0 "ADH2" "alcohol dehydrogenase II" 2,16,0,0 "ADH2" "alcohol dehydrogenase II" 40,3,0,0 "ADH2" "alcohol dehydrogenase II" ytymr312w - 4,5,1,1 "ELP6" "subunit of RNA polymerase II elongator complex" ytymr318c - 1,5,1,0 "null" "strong similarity to alcohol-dehydrogenase" 2,16,0,0 "null" "strong similarity to alcohol-dehydrogenase" ytynl067w 40,3,0,0 "RPL9B" "ribosomal protein L9.e.c14" 5,1,0,0 "RPL9B" "ribosomal protein L9.e.c14" ytynl135c 40,3,0,0 "FPR1" "peptidyl-prolyl cis-trans isomerase, FK506-binding protein" 6,1,0,0 "FPR1" "peptidyl-prolyl cis-trans isomerase, FK506-binding protein" ytynl301c 40,3,0,0 "RPL18B" "60S large subunit ribosomal protein L18.e" 5,1,0,0 "RPL18B" "60S large subunit ribosomal protein L18.e" ytynl327w - 14,1,0,0 "EGT2" "cell-cycle regulation protein" 3,3,1,0 "EGT2" "cell-cycle regulation protein" 3,3,3,0 "EGT2" "cell-cycle regulation protein" ytyol120c 40,3,0,0 "RPL18A" "60S large subunit ribosomal protein S18.e" 5,1,0,0 "RPL18A" "60S large subunit ribosomal protein S18.e" ytyor234c - 5,1,0,0 "RPL33B" "ribosomal protein L35a.e.c15" ytyor312c 40,3,0,0 "RPL20B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL20B" "60S large subunit ribosomal protein" ytyor369c 40,3,0,0 "RPS12" "40S small subunit acidic ribosomal protein S12" 5,1,0,0 "RPS12" "40S small subunit acidic ribosomal protein S12" ytypl061w 2,16,0,0 "ALD6" "aldehyde dehydrogenase, cytosolic" 40,3,0,0 "ALD6" "aldehyde dehydrogenase, cytosolic" ytypl131w 40,3,0,0 "RPL5" "60S large subunit ribosomal protein L5.e" 5,1,0,0 "RPL5" "60S large subunit ribosomal protein L5.e" ytypl240c 11,1,0,0 "HSP82" "heat shock protein" 14,4,3,3 "HSP82" "heat shock protein" 14,4,3,5 "HSP82" "heat shock protein" 2,19,0,0 "HSP82" "heat shock protein" 3,3,2,0 "HSP82" "heat shock protein" 40,3,0,0 "HSP82" "heat shock protein" ytypr132w 40,3,0,0 "RPS23B" "40S small subunit ribosomal protein S23.e" 5,1,0,0 "RPS23B" "40S small subunit ribosomal protein S23.e" Training Accuracy: 61/80 (76.25%) Training Frequency class '40/3/0/0': 237/1607 (14.75%) Evaluation on validation data (843 items): ytyal012w 1,1,1,0 "CYS3" "cystathionine gamma-lyase" 40,3,0,0 "CYS3" "cystathionine gamma-lyase" ytyal038w 1,5,1,0 "CDC19" "pyruvate kinase" 2,1,0,0 "CDC19" "pyruvate kinase" 40,3,0,0 "CDC19" "pyruvate kinase" ytybl005w - 11,7,0,0 "PDR3" "pleiotropic drug resistance regulatory protein" 4,5,1,4 "PDR3" "pleiotropic drug resistance regulatory protein" 40,10,0,0 "PDR3" "pleiotropic drug resistance regulatory protein" ytybr140c - 13,11,3,1 "IRA1" "inhibitory regulator protein of the ras-cyclic AMP pathway" 40,2,0,0 "IRA1" "inhibitory regulator protein of the ras-cyclic AMP pathway" 62,2,5,0 "IRA1" "inhibitory regulator protein of the ras-cyclic AMP pathway" ytybr143c 40,3,0,0 "SUP45" "translational release factor" 5,4,0,0 "SUP45" "translational release factor" ytybr283c - 40,7,0,0 "SSH1" "involved in co-translational pathway of protein transport" 6,4,0,0 "SSH1" "involved in co-translational pathway of protein transport" ytycl050c - 1,3,10,0 "APA1" "ATP adenylyltransferase I" ytydl130w 40,3,0,0 "RPP1B" "60S large subunit acidic ribosomal protein L44prime" 5,1,0,0 "RPP1B" "60S large subunit acidic ribosomal protein L44prime" ytydr012w 40,3,0,0 "RPL4B" "ribosomal protein L4.e.B" 5,1,0,0 "RPL4B" "ribosomal protein L4.e.B" ytydr353w - 1,2,1,0 "TRR1" "thioredoxin reductase (NADPH)" 1,3,7,0 "TRR1" "thioredoxin reductase (NADPH)" ytyel054c 40,3,0,0 "RPL12A" "60S large subunit ribosomal protein L12.e" 5,1,0,0 "RPL12A" "60S large subunit ribosomal protein L12.e" ytygl103w 40,3,0,0 "RPL28" "60S large subunit ribosomal protein L27a.e" 5,1,0,0 "RPL28" "60S large subunit ribosomal protein L27a.e" ytygr155w - 1,1,1,0 "CYS4" "cystathionine beta-synthase" ytygr192c 1,5,1,0 "TDH3" "glyceraldehyde-3-phosphate dehydrogenase 3" 2,1,0,0 "TDH3" "glyceraldehyde-3-phosphate dehydrogenase 3" 40,3,0,0 "TDH3" "glyceraldehyde-3-phosphate dehydrogenase 3" ytyhl001w 40,3,0,0 "RPL14B" "ribosomal protein" 5,1,0,0 "RPL14B" "ribosomal protein" ytyhl033c 40,3,0,0 "RPL8A" "60S large subunit ribosomal protein L7a.e.A" 5,1,0,0 "RPL8A" "60S large subunit ribosomal protein L7a.e.A" ytyhr165c - 3,3,1,0 "PRP8" "U5 snRNP protein, pre-mRNA splicing factor" 4,5,5,1 "PRP8" "U5 snRNP protein, pre-mRNA splicing factor" 40,10,0,0 "PRP8" "U5 snRNP protein, pre-mRNA splicing factor" ytyil105c - 4,99,0,0 "null" "weak similarity to probable transcription factor ASK10P" ytyir006c - 14,4,3,1 "PAN1" "actin-cytoskeleton assembly protein" 30,4,0,0 "PAN1" "actin-cytoskeleton assembly protein" 40,4,0,0 "PAN1" "actin-cytoskeleton assembly protein" 6,10,0,0 "PAN1" "actin-cytoskeleton assembly protein" 8,19,0,0 "PAN1" "actin-cytoskeleton assembly protein" 8,99,0,0 "PAN1" "actin-cytoskeleton assembly protein" ytyjl080c - 3,3,1,0 "SCP160" "required for maintenance of exact ploidy" 40,10,0,0 "SCP160" "required for maintenance of exact ploidy" 40,7,0,0 "SCP160" "required for maintenance of exact ploidy" ytyjl158c - 11,1,0,0 "CIS3" "strong similarity to PIR1P/HSP150P/PIR3P family" 14,4,3,1 "CIS3" "strong similarity to PIR1P/HSP150P/PIR3P family" ytyjl190c 40,3,0,0 "RPS22A" "ribosomal protein S15a.e.c10" 5,1,0,0 "RPS22A" "ribosomal protein S15a.e.c10" ytyjr025c - 1,1,10,0 "BNA1" "3-hydroxyanthranilic acid dioxygenase" 1,7,1,0 "BNA1" "3-hydroxyanthranilic acid dioxygenase" ytyjr047c 40,3,0,0 "ANB1" "translation initiation factor eIF5A.2" 5,4,0,0 "ANB1" "translation initiation factor eIF5A.2" ytyjr145c 40,3,0,0 "RPS4A" "ribosomal protein S4.e.c10" 5,1,0,0 "RPS4A" "ribosomal protein S4.e.c10" ytykl164c - 11,1,0,0 "PIR1" "required for tolerance to heat shock" 40,1,0,0 "PIR1" "required for tolerance to heat shock" ytyll024c - 6,1,0,0 "SSA2" "heat shock protein of HSP70 family, cytosolic" 6,4,0,0 "SSA2" "heat shock protein of HSP70 family, cytosolic" 8,4,0,0 "SSA2" "heat shock protein of HSP70 family, cytosolic" 8,7,0,0 "SSA2" "heat shock protein of HSP70 family, cytosolic" ytylr044c 1,5,1,0 "PDC1" "pyruvate decarboxylase, isozyme 1" 2,13,0,0 "PDC1" "pyruvate decarboxylase, isozyme 1" 2,16,0,0 "PDC1" "pyruvate decarboxylase, isozyme 1" 40,3,0,0 "PDC1" "pyruvate decarboxylase, isozyme 1" ytylr075w 3,3,1,0 "RPL10" "60S large subunit ribosomal protein" 40,3,0,0 "RPL10" "60S large subunit ribosomal protein" 5,1,0,0 "RPL10" "60S large subunit ribosomal protein" 6,10,0,0 "RPL10" "60S large subunit ribosomal protein" ytylr109w - 11,1,0,0 "AHP1" "Alkyl hydroperoxide reductase" 13,1,1,1 "AHP1" "Alkyl hydroperoxide reductase" 40,19,0,0 "AHP1" "Alkyl hydroperoxide reductase" ytylr110c - 30,1,0,0 "CCW12" "strong similarity to FLO1P" ytylr325c 40,3,0,0 "RPL38" "60S large subunit ribosomal protein" 5,1,0,0 "RPL38" "60S large subunit ribosomal protein" ytylr333c 40,3,0,0 "RPS25B" "ribosomal protein S25.e.c12" 5,1,0,0 "RPS25B" "ribosomal protein S25.e.c12" ytylr388w 40,3,0,0 "RPS29A" "ribosomal protein S29.e.A" 5,1,0,0 "RPS29A" "ribosomal protein S29.e.A" ytylr432w - 1,3,1,0 "IMD3" "strong similarity to IMP dehydrogenases, Pur5p and YML056c" ytylr441c 14,4,3,3 "RPS1A" "ribosomal protein S3a.e" 40,3,0,0 "RPS1A" "ribosomal protein S3a.e" 5,1,0,0 "RPS1A" "ribosomal protein S3a.e" ytynl031c - 4,5,1,4 "HHT2" "histone H3" 40,10,3,0 "HHT2" "histone H3" ytynl096c 40,3,0,0 "RPS7B" "strong similarity to ribosomal protein S7" 5,1,0,0 "RPS7B" "strong similarity to ribosomal protein S7" ytynl302c 40,3,0,0 "RPS19B" "40S small subunit ribosomal protein S19.e" 5,1,0,0 "RPS19B" "40S small subunit ribosomal protein S19.e" ytyol121c 40,3,0,0 "RPS19A" "40S small subunit ribosomal protein S19.e" 5,1,0,0 "RPS19A" "40S small subunit ribosomal protein S19.e" ytyor133w 40,3,0,0 "EFT1" "translation elongation factor eEF2" 5,4,0,0 "EFT1" "translation elongation factor eEF2" ytyor153w - 1,6,13,0 "PDR5" "pleiotropic drug resistance protein" 11,7,0,0 "PDR5" "pleiotropic drug resistance protein" 13,1,1,1 "PDR5" "pleiotropic drug resistance protein" 40,2,0,0 "PDR5" "pleiotropic drug resistance protein" 67,4,1,2 "PDR5" "pleiotropic drug resistance protein" 67,50,25,0 "PDR5" "pleiotropic drug resistance protein" ytyor247w - 11,7,0,0 "SRL1" "similarity to vanadate sensitive suppressor SVS1P" ytyor361c 14,4,3,5 "PRT1" "translation initiation factor eIF3 subunit" 3,3,1,0 "PRT1" "translation initiation factor eIF3 subunit" 40,3,0,0 "PRT1" "translation initiation factor eIF3 subunit" 5,4,0,0 "PRT1" "translation initiation factor eIF3 subunit" ytypl106c 11,1,0,0 "SSE1" "heat shock protein of HSP70 family" 13,11,3,1 "SSE1" "heat shock protein of HSP70 family" 14,1,3,99 "SSE1" "heat shock protein of HSP70 family" 40,3,0,0 "SSE1" "heat shock protein of HSP70 family" ytypl226w - 5,4,0,0 "NEW1" "similarity to translation elongation factor eEF3" 67,50,25,0 "NEW1" "similarity to translation elongation factor eEF3" ytypr102c 40,3,0,0 "RPL11A" "ribosomal protein L11.e" 5,1,0,0 "RPL11A" "ribosomal protein L11.e" Validation Accuracy: 26/47 (55.32%) Validation Frequency class '40/3/0/0': 114/843 (13.52%) Evaluation on propertest data (1276 items): ytyhr007c - 1,6,1,0 "ERG11" "cytochrome P450 lanosterol 14a-demethylase" 11,7,1,0 "ERG11" "cytochrome P450 lanosterol 14a-demethylase" 40,7,0,0 "ERG11" "cytochrome P450 lanosterol 14a-demethylase" ytybl002w - 4,5,1,4 "HTB2" "histone H2B.2" 40,10,3,0 "HTB2" "histone H2B.2" ytybl027w 40,3,0,0 "RPL19B" "60S large subunit ribosomal protein L19.e" 5,1,0,0 "RPL19B" "60S large subunit ribosomal protein L19.e" ytybl072c 40,3,0,0 "RPS8A" "ribosomal protein S8.e" 5,1,0,0 "RPS8A" "ribosomal protein S8.e" ytybr048w 40,3,0,0 "RPS11B" "ribosomal protein S11.e.B" 5,1,0,0 "RPS11B" "ribosomal protein S11.e.B" ytybr092c - 1,4,1,0 "PHO3" "constitutive acid phosphatase precursor" 1,7,4,0 "PHO3" "constitutive acid phosphatase precursor" 40,27,0,0 "PHO3" "constitutive acid phosphatase precursor" ytybr118w 40,3,0,0 "TEF2" "translation elongation factor eEF1 alpha-A chain, cytosolic" 5,4,0,0 "TEF2" "translation elongation factor eEF1 alpha-A chain, cytosolic" ytybr121c 40,3,0,0 "GRS1" "glycine--tRNA ligase" 5,10,0,0 "GRS1" "glycine--tRNA ligase" ytybr156c - 3,3,1,0 "SLI15" "Mitotic spindle protein involved in chromosome segregation" ytycr031c 40,3,0,0 "RPS14A" "40S Ribosomal protein S14.e" 5,1,0,0 "RPS14A" "40S Ribosomal protein S14.e" ytydl055c - 1,5,1,0 "PSA1" "mannose-1-phosphate guanyltransferase" 30,1,0,0 "PSA1" "mannose-1-phosphate guanyltransferase" ytydl058w 40,3,0,0 "USO1" "intracellular protein transport protein" 8,7,0,0 "USO1" "intracellular protein transport protein" ytydl081c 40,3,0,0 "RPP1A" "60S large subunit acidic ribosomal protein a1" 5,1,0,0 "RPP1A" "60S large subunit acidic ribosomal protein a1" 5,4,0,0 "RPP1A" "60S large subunit acidic ribosomal protein a1" ytydl083c 40,3,0,0 "RPS16B" "ribosomal protein S16.e" 5,1,0,0 "RPS16B" "ribosomal protein S16.e" ytydl084w - 4,5,5,1 "SUB2" "probably involved in pre-mRNA splicing" ytydl100c - 11,7,0,0 "null" "similarity to E.coli arsenical pump-driving ATPase" ytydl182w - 1,1,1,0 "LYS20" "homocitrate synthase" 1,5,1,0 "LYS20" "homocitrate synthase" 40,10,0,0 "LYS20" "homocitrate synthase" ytydl184c 40,3,0,0 "RPL41A" "ribosomal protein" 5,1,0,0 "RPL41A" "ribosomal protein" ytydl208w - 4,1,4,0 "NHP2" "nucleolar rRNA processing protein" 40,10,0,0 "NHP2" "nucleolar rRNA processing protein" ytydr050c 1,5,1,0 "TPI1" "triose-phosphate isomerase" 2,1,0,0 "TPI1" "triose-phosphate isomerase" 40,3,0,0 "TPI1" "triose-phosphate isomerase" ytydr155c 11,1,0,0 "CPH1" "cyclophilin (peptidylprolyl isomerase)" 40,3,0,0 "CPH1" "cyclophilin (peptidylprolyl isomerase)" 6,1,0,0 "CPH1" "cyclophilin (peptidylprolyl isomerase)" ytydr382w 40,3,0,0 "RPP2B" "60S large subunit acidic ribosomal protein" 5,1,0,0 "RPP2B" "60S large subunit acidic ribosomal protein" ytydr418w 40,3,0,0 "RPL12B" "60S large subunit ribosomal protein L12.e" 5,1,0,0 "RPL12B" "60S large subunit ribosomal protein L12.e" ytyer074w 40,3,0,0 "RPS24A" "40s small subunit ribosomal protein S24.e" 5,1,0,0 "RPS24A" "40s small subunit ribosomal protein S24.e" ytyer120w - 1,5,4,0 "SCS2" "required for inositol metabolism" 4,5,1,4 "SCS2" "required for inositol metabolism" 40,7,0,0 "SCS2" "required for inositol metabolism" ytyer172c - 4,5,5,1 "BRR2" "RNA helicase-related protein" 40,10,0,0 "BRR2" "RNA helicase-related protein" ytyfl001w 4,3,6,0 "DEG1" "pseudouridine synthase" 40,10,0,0 "DEG1" "pseudouridine synthase" 40,3,0,0 "DEG1" "pseudouridine synthase" ytygl008c - 13,1,1,3 "PMA1" "H+-transporting P-type ATPase, major isoform, plasma membrane" 40,2,0,0 "PMA1" "H+-transporting P-type ATPase, major isoform, plasma membrane" 67,4,1,2 "PMA1" "H+-transporting P-type ATPase, major isoform, plasma membrane" 67,50,22,0 "PMA1" "H+-transporting P-type ATPase, major isoform, plasma membrane" ytygl123w 40,3,0,0 "RPS2" "40S small subunit ribosomal protein" 5,1,0,0 "RPS2" "40S small subunit ribosomal protein" ytygr027c 40,3,0,0 "RPS25A" "ribosomal protein S25.e.c7" 5,1,0,0 "RPS25A" "ribosomal protein S25.e.c7" ytygr085c 40,3,0,0 "RPL11B" "ribosomal protein" 5,1,0,0 "RPL11B" "ribosomal protein" ytyhr076w - 2,99,0,0 "null" "weak similarity to C.elegans hypothetical protein CEW09D10" 40,16,0,0 "null" "weak similarity to C.elegans hypothetical protein CEW09D10" ytyhr216w - 1,3,1,0 "IMD2" "IMP dehydrogenase" ytyil053w - 1,5,1,0 "RHR2" "DL-glycerol phosphatase" ytyil075c - 4,3,3,0 "RPN2" "26S proteasome regulatory subunit" 40,10,0,0 "RPN2" "26S proteasome regulatory subunit" 40,7,0,0 "RPN2" "26S proteasome regulatory subunit" 6,13,1,0 "RPN2" "26S proteasome regulatory subunit" ytyjl052w 1,5,1,0 "TDH1" "glyceraldehyde-3-phosphate dehydrogenase 1" 2,1,0,0 "TDH1" "glyceraldehyde-3-phosphate dehydrogenase 1" 40,3,0,0 "TDH1" "glyceraldehyde-3-phosphate dehydrogenase 1" ytyjl138c 40,3,0,0 "TIF2" "translation initiation factor eIF4A" 5,4,0,0 "TIF2" "translation initiation factor eIF4A" ytyjr009c 1,5,1,0 "TDH2" "glyceraldehyde-3-phosphate dehydrogenase 2" 2,1,0,0 "TDH2" "glyceraldehyde-3-phosphate dehydrogenase 2" 40,3,0,0 "TDH2" "glyceraldehyde-3-phosphate dehydrogenase 2" ytykl060c 1,5,1,0 "FBA1" "fructose-bisphosphate aldolase" 2,1,0,0 "FBA1" "fructose-bisphosphate aldolase" 40,3,0,0 "FBA1" "fructose-bisphosphate aldolase" ytykl080w - 13,1,1,1 "VMA5" "H+-ATPase V1 domain 42 KD subunit, vacuolar" 40,25,0,0 "VMA5" "H+-ATPase V1 domain 42 KD subunit, vacuolar" 6,10,0,0 "VMA5" "H+-ATPase V1 domain 42 KD subunit, vacuolar" 67,4,1,2 "VMA5" "H+-ATPase V1 domain 42 KD subunit, vacuolar" 67,50,22,0 "VMA5" "H+-ATPase V1 domain 42 KD subunit, vacuolar" 8,13,0,0 "VMA5" "H+-ATPase V1 domain 42 KD subunit, vacuolar" ytykr059w 40,3,0,0 "TIF1" "translation initiation factor 4A" 5,4,0,0 "TIF1" "translation initiation factor 4A" ytyll045c 40,3,0,0 "RPL8B" "60s large subunit ribosomal protein L7a.e.B" 5,1,0,0 "RPL8B" "60s large subunit ribosomal protein L7a.e.B" ytylr058c 1,3,1,0 "SHM2" "serine hydroxymethyltransferase, cytoplasmic" 1,6,1,0 "SHM2" "serine hydroxymethyltransferase, cytoplasmic" 40,3,0,0 "SHM2" "serine hydroxymethyltransferase, cytoplasmic" ytylr264w 40,3,0,0 "RPS28B" "40S small subunit ribosomal protein S28.e.c12" 5,1,0,0 "RPS28B" "40S small subunit ribosomal protein S28.e.c12" ytylr286c - 1,5,1,0 "CTS1" "endochitinase" 3,3,3,0 "CTS1" "endochitinase" 40,27,0,0 "CTS1" "endochitinase" ytylr354c 1,5,1,0 "TAL1" "transaldolase" 2,7,0,0 "TAL1" "transaldolase" 40,3,0,0 "TAL1" "transaldolase" ytylr355c - 1,1,1,0 "ILV5" "ketol-acid reducto-isomerase" 40,16,0,0 "ILV5" "ketol-acid reducto-isomerase" ytyml063w 40,3,0,0 "RPS1B" "ribosomal protein S3a.e" 5,1,0,0 "RPS1B" "ribosomal protein S3a.e" ytymr121c 40,3,0,0 "RPL15B" "60S large subunit ribosomal protein L15.e.c13" 5,1,0,0 "RPL15B" "60S large subunit ribosomal protein L15.e.c13" ytymr217w - 1,3,1,0 "GUA1" "GMP synthase (glutamine-hydrolyzing)" ytymr242c 40,3,0,0 "RPL20A" "60s large subunit ribosomal protein" 5,1,0,0 "RPL20A" "60s large subunit ribosomal protein" ytynl119w - 5,1,0,0 "null" "weak similarity to M.jannaschii hypothetical protein MJ1257" ytynl209w 40,3,0,0 "SSB2" "heat shock protein of HSP70 family, cytosolic" 5,99,0,0 "SSB2" "heat shock protein of HSP70 family, cytosolic" ytynl271c - 14,4,3,1 "BNI1" "regulator of budding" 14,4,3,3 "BNI1" "regulator of budding" 3,3,3,0 "BNI1" "regulator of budding" 40,4,0,0 "BNI1" "regulator of budding" ytyol039w 40,3,0,0 "RPP2A" "acidic ribosomal protein P2.beta" 5,1,0,0 "RPP2A" "acidic ribosomal protein P2.beta" ytyol040c 40,3,0,0 "RPS15" "40S small subunit ribosomal protein" 5,1,0,0 "RPS15" "40S small subunit ribosomal protein" ytyol086c 1,5,1,0 "ADH1" "alcohol dehydrogenase I" 2,16,0,0 "ADH1" "alcohol dehydrogenase I" 40,3,0,0 "ADH1" "alcohol dehydrogenase I" ytyor063w 40,3,0,0 "RPL3" "60S large subunit ribosomal protein L3.e" 5,1,0,0 "RPL3" "60S large subunit ribosomal protein L3.e" ytyor167c 40,3,0,0 "RPS28A" "40S small subunit ribosomal protein S28.e.c15" 5,1,0,0 "RPS28A" "40S small subunit ribosomal protein S28.e.c15" ytypl090c 40,3,0,0 "RPS6A" "ribosomal protein S6.e" 5,1,0,0 "RPS6A" "ribosomal protein S6.e" ytypl143w 40,3,0,0 "RPL33A" "ribosomal protein L35a.e.c16" 5,1,0,0 "RPL33A" "ribosomal protein L35a.e.c16" ytypl220w 40,3,0,0 "RPL1A" "ribosomal protein" 5,1,0,0 "RPL1A" "ribosomal protein" ytypl237w 40,3,0,0 "SUI3" "translation initiation factor eIF2 beta subunit" 5,4,0,0 "SUI3" "translation initiation factor eIF2 beta subunit" ytypr145w 1,1,1,0 "ASN1" "asparagine synthetase" 40,3,0,0 "ASN1" "asparagine synthetase" ytydl184c 40,3,0,0 "RPL41A" "ribosomal protein" 5,1,0,0 "RPL41A" "ribosomal protein" ytypl231w 1,6,1,0 "FAS2" "fatty-acyl-CoA synthase, alpha chain" 40,3,0,0 "FAS2" "fatty-acyl-CoA synthase, alpha chain" 6,10,0,0 "FAS2" "fatty-acyl-CoA synthase, alpha chain" Propertest Accuracy: 44/66 (66.67%) Propertest Frequency class '40/3/0/0': 193/1276 (15.13%) New (unknown) data (843 items): ytybl112c - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytycr013c - 99,0,0,0 "null" "similarity to M.leprae B1496_F1_41 protein" ytydl050c - 99,0,0,0 "null" "questionable ORF" ytydl060w - 99,0,0,0 "TSR1" "similarity to C.elegans hypothetical protein" ytydl228c - 99,0,0,0 "null" "similarity to A.klebsiana glutamate dehydrogenase" ytydr133c - 99,0,0,0 "null" "questionable ORF" ytydr366c - 99,0,0,0 "null" "similarity to YOL106w and YER181c" ytydr417c - 99,0,0,0 "null" "questionable ORF" ytyel001c - 99,0,0,0 "null" "hypothetical protein" ytyel077c - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytyer093c - 99,0,0,0 "null" "weak similarity to S.epidermidis PepB protein" ytyfl007w - 99,0,0,0 "BLM3" "weak similarity to Mms19p" ytyfl067w - 99,0,0,0 "null" "similarity to mouse period clock protein" ytygr160w - 99,0,0,0 "FYV13" "weak similarity to C. elegans Y113G7B.12 protein of unknown function" ytygr295c - 99,0,0,0 "COS6" "strong similarity to subtelomeric encoded proteins" ytyhl050c - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytyhr078w - 99,0,0,0 "null" "hypothetical protein" ytyhr219w - 99,0,0,0 "null" "strong similarity to other subtelomeric encoded proteins" ytyil104c - 99,0,0,0 "null" "similarity to hypothetical S. pombe protein" ytyjr115w - 99,0,0,0 "null" "similarity to hypothetical protein YBL043w" ytykl086w - 99,0,0,0 "null" "strong similarity to PIR:T39259 hypothetical protein S. pombe" ytykl153w - 99,0,0,0 "null" "questionable ORF" ytylr062c - 99,0,0,0 "BUD28" "questionable ORF" ytylr076c - 99,0,0,0 "null" "questionable ORF" ytylr198c - 99,0,0,0 "null" "questionable ORF" ytylr437c - 99,0,0,0 "null" "hypothetical protein" ytynl013c - 99,0,0,0 "null" "questionable ORF" ytynl127w - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein" ytynl190w - 99,0,0,0 "null" "weak similarity to MUCIN 1 PRECURSOR Mesocricetus auratus (Golden hamster)" ytynr021w - 99,0,0,0 "null" "weak similarity to hypothetical protein S. pombe" ytyol109w - 98,0,0,0 "ZEO1" "weak similarity to G.hirsutum embryonic abundant protein D-7" ytyor248w - 99,0,0,0 "TOS11" "hypothetical protein" ytyor309c - 99,0,0,0 "null" "questionable ORF" ytypl142c - 99,0,0,0 "null" "questionable ORF" ------------------ Rule 1397: g5_ratio > 0.88 g7dashbkg > 7743 -> class 40/3/0/0 "cytoplasm" Evaluation on training data (1607 items): ytyal003w 40,3,0,0 "EFB1" "translation elongation factor eEF1beta" 5,4,2,0 "EFB1" "translation elongation factor eEF1beta" ytyal004w - 1,1,1,0 "null" "strong similarity to A.klebsiana glutamate dehydrogenase" ytyal005c 11,1,0,0 "SSA1" "heat shock protein of HSP70 family, cytosolic" 40,3,0,0 "SSA1" "heat shock protein of HSP70 family, cytosolic" 6,1,0,0 "SSA1" "heat shock protein of HSP70 family, cytosolic" 6,4,0,0 "SSA1" "heat shock protein of HSP70 family, cytosolic" 8,1,0,0 "SSA1" "heat shock protein of HSP70 family, cytosolic" ytyal035w 40,3,0,0 "FUN12" "general translation factor eIF2 homolog" 5,4,1,0 "FUN12" "general translation factor eIF2 homolog" ytybl003c - 4,5,1,4 "HTA2" "histone H2A.2" 40,10,3,0 "HTA2" "histone H2A.2" ytybl087c 40,3,0,0 "RPL23A" "60S large subunit ribosomal protein L23.e" 5,1,0,0 "RPL23A" "60S large subunit ribosomal protein L23.e" ytybl092w 40,3,0,0 "RPL32" "60S large subunit ribosomal protein L32.e" 5,1,0,0 "RPL32" "60S large subunit ribosomal protein L32.e" ytybr031w 40,3,0,0 "RPL4A" "ribosomal protein" 5,1,0,0 "RPL4A" "ribosomal protein" ytybr181c 40,3,0,0 "RPS6B" "ribosomal protein S6.e" 5,1,0,0 "RPS6B" "ribosomal protein S6.e" ytybr189w 40,3,0,0 "RPS9B" "ribosomal protein S9.e.B" 5,1,0,0 "RPS9B" "ribosomal protein S9.e.B" ytybr191w 40,3,0,0 "RPL21A" "ribosomal protein L21.e" 5,1,0,0 "RPL21A" "ribosomal protein L21.e" ytybr249c 1,1,1,0 "ARO4" "2-dehydro-3-deoxyphosphoheptonate aldolase, tyrosine-inhibited" 40,3,0,0 "ARO4" "2-dehydro-3-deoxyphosphoheptonate aldolase, tyrosine-inhibited" ytydl052c - 1,6,1,0 "SLC1" "fatty acyltransferase" 40,99,0,0 "SLC1" "fatty acyltransferase" ytydl061c 40,3,0,0 "RPS29B" "ribosomal protein S29.e.B" 5,1,0,0 "RPS29B" "ribosomal protein S29.e.B" ytydl075w 40,3,0,0 "RPL31A" "60S large subunit ribosomal protein L31.e" 5,1,0,0 "RPL31A" "60S large subunit ribosomal protein L31.e" ytydl082w 40,3,0,0 "RPL13A" "60S large subunit ribosomal protein L13" 5,1,0,0 "RPL13A" "60S large subunit ribosomal protein L13" ytydl131w - 1,1,1,0 "LYS21" "homocitrate synthase" 1,5,1,0 "LYS21" "homocitrate synthase" 40,10,0,0 "LYS21" "homocitrate synthase" ytydl191w 40,3,0,0 "RPL35A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL35A" "60S large subunit ribosomal protein" ytydr002w 4,7,0,0 "YRB1" "ran-specific GTPase-activating protein" 40,3,0,0 "YRB1" "ran-specific GTPase-activating protein" 8,1,0,0 "YRB1" "ran-specific GTPase-activating protein" ytydr025w 40,3,0,0 "RPS11A" "ribosomal protein S11.e" 5,1,0,0 "RPS11A" "ribosomal protein S11.e" ytydr064w 40,3,0,0 "RPS13" "ribosomal protein" 5,1,0,0 "RPS13" "ribosomal protein" ytydr180w - 3,3,1,0 "SCC2" "involved in sister chromatid cohesion" 40,10,0,0 "SCC2" "involved in sister chromatid cohesion" ytydr385w 40,3,0,0 "EFT2" "translation elongation factor eEF2" 5,4,0,0 "EFT2" "translation elongation factor eEF2" ytydr447c 40,3,0,0 "RPS17B" "ribosomal protein S17.e.B" 5,1,0,0 "RPS17B" "ribosomal protein S17.e.B" ytydr450w 40,3,0,0 "RPS18A" "ribosomal protein S18.e.c4" 5,1,0,0 "RPS18A" "ribosomal protein S18.e.c4" ytydr500c 40,3,0,0 "RPL37B" "ribosomal protein L.37.e" 5,1,0,0 "RPL37B" "ribosomal protein L.37.e" ytyel034w 1,3,16,0 "HYP2" "translation initiation factor eIF5A.1" 40,3,0,0 "HYP2" "translation initiation factor eIF5A.1" 5,4,0,0 "HYP2" "translation initiation factor eIF5A.1" ytyel046c - 1,1,1,0 "GLY1" "L-threonine aldolase, low-specific" 1,1,10,0 "GLY1" "L-threonine aldolase, low-specific" ytyer117w 40,3,0,0 "RPL23B" "ribosomal protein L23.e" 5,1,0,0 "RPL23B" "ribosomal protein L23.e" ytyer131w 40,3,0,0 "RPS26B" "40S small subunit ribosomal protein S26e-c5" 5,1,0,0 "RPS26B" "40S small subunit ribosomal protein S26e-c5" ytygl030w 40,3,0,0 "RPL30" "60S large subunit ribosomal protein L30.e" 5,1,0,0 "RPL30" "60S large subunit ribosomal protein L30.e" ytygl049c 40,3,0,0 "TIF4632" "mRNA cap-binding protein (eIF4F), 130K subunit" 5,4,0,0 "TIF4632" "mRNA cap-binding protein (eIF4F), 130K subunit" ytygl076c 40,3,0,0 "RPL7A" "60S large subunit ribosomal protein L7.e.A" 5,1,0,0 "RPL7A" "60S large subunit ribosomal protein L7.e.A" ytygl147c 40,3,0,0 "RPL9A" "ribosomal protein L9.e" 5,1,0,0 "RPL9A" "ribosomal protein L9.e" ytygl189c 40,3,0,0 "RPS26A" "40S small subunit ribosomal protein S26e.c7" 5,1,0,0 "RPS26A" "40S small subunit ribosomal protein S26e.c7" ytygr061c 1,3,1,0 "ADE6" "5'-phosphoribosylformyl glycinamidine synthetase" 40,3,0,0 "ADE6" "5'-phosphoribosylformyl glycinamidine synthetase" ytygr094w 40,16,0,0 "VAS1" "valyl-tRNA synthetase" 40,3,0,0 "VAS1" "valyl-tRNA synthetase" 5,10,0,0 "VAS1" "valyl-tRNA synthetase" ytygr148c 40,3,0,0 "RPL24B" "60S large subunit ribosomal protein L24.e.B" 5,1,0,0 "RPL24B" "60S large subunit ribosomal protein L24.e.B" ytygr214w 14,4,3,1 "RPS0A" "40S ribosomal protein p40 homolog A" 40,3,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" 5,1,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" 6,10,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" ytyhl015w 40,3,0,0 "RPS20" "ribosomal protein" 5,1,0,0 "RPS20" "ribosomal protein" ytyhr019c - 5,10,0,0 "DED81" "asparaginyl-tRNA-synthetase" ytyhr064c - 11,1,0,0 "PDR13" "regulator protein involved in pleiotropic drug resistance" ytyhr204w - 1,5,1,0 "HTM1" "similarity to alpha-mannosidases" ytyil018w 40,3,0,0 "RPL2B" "60S large subunit ribosomal protein L8.e" 5,1,0,0 "RPL2B" "60S large subunit ribosomal protein L8.e" ytyil051c - 30,16,0,0 "MMF1" "required for maintenance of mitochondrial DNA" ytyil052c 40,3,0,0 "RPL34B" "ribosomal protein L34.e" 5,1,0,0 "RPL34B" "ribosomal protein L34.e" ytyil078w 1,3,16,0 "THS1" "threonyl tRNA synthetase, cytosolic" 40,3,0,0 "THS1" "threonyl tRNA synthetase, cytosolic" 5,10,0,0 "THS1" "threonyl tRNA synthetase, cytosolic" ytyil133c 40,3,0,0 "RPL16A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL16A" "60S large subunit ribosomal protein" ytyjl031c 1,6,7,0 "BET4" "geranylgeranyl transferase, alpha chain" 40,3,0,0 "BET4" "geranylgeranyl transferase, alpha chain" 6,7,0,0 "BET4" "geranylgeranyl transferase, alpha chain" ytyjl177w 40,3,0,0 "RPL17B" "60s large subunit ribosomal protein L17.e" 5,1,0,0 "RPL17B" "60s large subunit ribosomal protein L17.e" ytyjr045c - 11,1,0,0 "SSC1" "mitochondrial heat shock protein 70-related protein" 40,16,0,0 "SSC1" "mitochondrial heat shock protein 70-related protein" 6,1,0,0 "SSC1" "mitochondrial heat shock protein 70-related protein" 8,4,0,0 "SSC1" "mitochondrial heat shock protein 70-related protein" ytyjr123w 40,3,0,0 "RPS5" "ribosomal protein S5.e" 5,1,0,0 "RPS5" "ribosomal protein S5.e" ytykl001c - 1,1,1,0 "MET14" "ATP adenosine-5'-phosphosulfate 3'-phosphotransferase" 1,2,1,0 "MET14" "ATP adenosine-5'-phosphosulfate 3'-phosphotransferase" ytykl006w 40,3,0,0 "RPL14A" "ribosomal protein" 5,1,0,0 "RPL14A" "ribosomal protein" ytykl056c 40,3,0,0 "null" "strong similarity to human IgE-dependent histamine-releasing factor" 5,1,0,0 "null" "strong similarity to human IgE-dependent histamine-releasing factor" ytykl081w 40,3,0,0 "TEF4" "translation elongation factor eEF1, gamma chain" 5,4,0,0 "TEF4" "translation elongation factor eEF1, gamma chain" ytykl152c 1,5,1,0 "GPM1" "phosphoglycerate mutase" 2,1,0,0 "GPM1" "phosphoglycerate mutase" 40,3,0,0 "GPM1" "phosphoglycerate mutase" ytykr057w 40,3,0,0 "RPS21A" "ribosomal protein S21.e" 5,1,0,0 "RPS21A" "ribosomal protein S21.e" ytyll039c 11,1,0,0 "UBI4" "ubiquitin" 14,4,3,5 "UBI4" "ubiquitin" 40,10,0,0 "UBI4" "ubiquitin" 40,3,0,0 "UBI4" "ubiquitin" 5,99,0,0 "UBI4" "ubiquitin" 6,10,0,0 "UBI4" "ubiquitin" 6,13,1,0 "UBI4" "ubiquitin" ytylr029c 40,3,0,0 "RPL15A" "60s large subunit ribosomal protein L15.e.c12" 5,1,0,0 "RPL15A" "60s large subunit ribosomal protein L15.e.c12" ytylr048w 40,3,0,0 "RPS0B" "40S ribosomal protein p40 homolog B" 5,1,0,0 "RPS0B" "40S ribosomal protein p40 homolog B" 6,10,0,0 "RPS0B" "40S ribosomal protein p40 homolog B" ytylr056w - 1,6,1,0 "ERG3" "C-5 sterol desaturase" 40,7,0,0 "ERG3" "C-5 sterol desaturase" ytylr061w - 5,1,0,0 "RPL22A" "ribosomal protein" ytylr134w 1,5,1,0 "PDC5" "pyruvate decarboxylase, isozyme 2" 2,16,0,0 "PDC5" "pyruvate decarboxylase, isozyme 2" 40,3,0,0 "PDC5" "pyruvate decarboxylase, isozyme 2" ytylr150w - 1,5,4,0 "STM1" "specific affinity for guanine-rich quadruplex nucleic acids" 10,1,99,0 "STM1" "specific affinity for guanine-rich quadruplex nucleic acids" ytylr167w 40,3,0,0 "RPS31" "ubiquitin/40S small subunit ribosomal protein" 5,1,0,0 "RPS31" "ubiquitin/40S small subunit ribosomal protein" 6,13,1,0 "RPS31" "ubiquitin/40S small subunit ribosomal protein" ytylr180w - 1,1,1,0 "SAM1" "S-adenosylmethionine synthetase 1" 1,1,10,0 "SAM1" "S-adenosylmethionine synthetase 1" ytylr249w 30,1,0,0 "YEF3" "translation elongation factor eEF3" 40,3,0,0 "YEF3" "translation elongation factor eEF3" 5,4,0,0 "YEF3" "translation elongation factor eEF3" ytylr293c 4,7,0,0 "GSP1" "GTP-binding protein of the ras superfamily" 40,10,0,0 "GSP1" "GTP-binding protein of the ras superfamily" 40,3,0,0 "GSP1" "GTP-binding protein of the ras superfamily" 8,1,0,0 "GSP1" "GTP-binding protein of the ras superfamily" ytylr340w 40,3,0,0 "RPP0" "acidic ribosomal protein L10.e" 5,1,0,0 "RPP0" "acidic ribosomal protein L10.e" ytylr344w 40,3,0,0 "RPL26A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL26A" "60S large subunit ribosomal protein" ytylr448w 40,3,0,0 "RPL6B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL6B" "60S large subunit ribosomal protein" ytymr205c 1,5,1,0 "PFK2" "6-phosphofructokinase, beta subunit" 1,5,4,0 "PFK2" "6-phosphofructokinase, beta subunit" 2,1,0,0 "PFK2" "6-phosphofructokinase, beta subunit" 40,3,0,0 "PFK2" "6-phosphofructokinase, beta subunit" ytymr312w - 4,5,1,1 "ELP6" "subunit of RNA polymerase II elongator complex" ytymr318c - 1,5,1,0 "null" "strong similarity to alcohol-dehydrogenase" 2,16,0,0 "null" "strong similarity to alcohol-dehydrogenase" ytynl067w 40,3,0,0 "RPL9B" "ribosomal protein L9.e.c14" 5,1,0,0 "RPL9B" "ribosomal protein L9.e.c14" ytynl071w - 1,5,1,0 "LAT1" "dihydrolipoamide S-acetyltransferase" 2,1,0,0 "LAT1" "dihydrolipoamide S-acetyltransferase" 40,16,0,0 "LAT1" "dihydrolipoamide S-acetyltransferase" ytynl178w 40,3,0,0 "RPS3" "ribosomal protein S3.e" 5,1,0,0 "RPS3" "ribosomal protein S3.e" ytynl301c 40,3,0,0 "RPL18B" "60S large subunit ribosomal protein L18.e" 5,1,0,0 "RPL18B" "60S large subunit ribosomal protein L18.e" ytynl327w - 14,1,0,0 "EGT2" "cell-cycle regulation protein" 3,3,1,0 "EGT2" "cell-cycle regulation protein" 3,3,3,0 "EGT2" "cell-cycle regulation protein" ytyol120c 40,3,0,0 "RPL18A" "60S large subunit ribosomal protein S18.e" 5,1,0,0 "RPL18A" "60S large subunit ribosomal protein S18.e" ytyol051w - 1,5,4,0 "GAL11" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit" 14,4,3,3 "GAL11" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit" 14,4,3,5 "GAL11" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit" 4,5,1,1 "GAL11" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit" 40,10,0,0 "GAL11" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit" ytyor234c - 5,1,0,0 "RPL33B" "ribosomal protein L35a.e.c15" ytyor312c 40,3,0,0 "RPL20B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL20B" "60S large subunit ribosomal protein" ytyor369c 40,3,0,0 "RPS12" "40S small subunit acidic ribosomal protein S12" 5,1,0,0 "RPS12" "40S small subunit acidic ribosomal protein S12" ytypl061w 2,16,0,0 "ALD6" "aldehyde dehydrogenase, cytosolic" 40,3,0,0 "ALD6" "aldehyde dehydrogenase, cytosolic" ytypl082c - 4,5,1,4 "MOT1" "transcriptional accessory protein" 40,10,0,0 "MOT1" "transcriptional accessory protein" ytypl131w 40,3,0,0 "RPL5" "60S large subunit ribosomal protein L5.e" 5,1,0,0 "RPL5" "60S large subunit ribosomal protein L5.e" ytypr033c 40,10,0,0 "HTS1" "histidine--tRNA ligase, mitochondrial" 40,3,0,0 "HTS1" "histidine--tRNA ligase, mitochondrial" 5,10,0,0 "HTS1" "histidine--tRNA ligase, mitochondrial" ytypr080w 40,3,0,0 "TEF1" "translation elongation factor eEF1 alpha-A chain, cytosolic" 5,4,0,0 "TEF1" "translation elongation factor eEF1 alpha-A chain, cytosolic" ytypr132w 40,3,0,0 "RPS23B" "40S small subunit ribosomal protein S23.e" 5,1,0,0 "RPS23B" "40S small subunit ribosomal protein S23.e" Training Accuracy: 68/91 (74.73%) Training Frequency class '40/3/0/0': 237/1607 (14.75%) Evaluation on validation data (843 items): ytyal012w 1,1,1,0 "CYS3" "cystathionine gamma-lyase" 40,3,0,0 "CYS3" "cystathionine gamma-lyase" ytyal038w 1,5,1,0 "CDC19" "pyruvate kinase" 2,1,0,0 "CDC19" "pyruvate kinase" 40,3,0,0 "CDC19" "pyruvate kinase" ytybl005w - 11,7,0,0 "PDR3" "pleiotropic drug resistance regulatory protein" 4,5,1,4 "PDR3" "pleiotropic drug resistance regulatory protein" 40,10,0,0 "PDR3" "pleiotropic drug resistance regulatory protein" ytybl076c 40,3,0,0 "ILS1" "isoleucyl-tRNA synthetase" 5,10,0,0 "ILS1" "isoleucyl-tRNA synthetase" ytybr140c - 13,11,3,1 "IRA1" "inhibitory regulator protein of the ras-cyclic AMP pathway" 40,2,0,0 "IRA1" "inhibitory regulator protein of the ras-cyclic AMP pathway" 62,2,5,0 "IRA1" "inhibitory regulator protein of the ras-cyclic AMP pathway" ytybr143c 40,3,0,0 "SUP45" "translational release factor" 5,4,0,0 "SUP45" "translational release factor" ytybr283c - 40,7,0,0 "SSH1" "involved in co-translational pathway of protein transport" 6,4,0,0 "SSH1" "involved in co-translational pathway of protein transport" ytycl050c - 1,3,10,0 "APA1" "ATP adenylyltransferase I" ytydl130w 40,3,0,0 "RPP1B" "60S large subunit acidic ribosomal protein L44prime" 5,1,0,0 "RPP1B" "60S large subunit acidic ribosomal protein L44prime" ytydl136w 40,3,0,0 "RPL35B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL35B" "60S large subunit ribosomal protein" ytydr012w 40,3,0,0 "RPL4B" "ribosomal protein L4.e.B" 5,1,0,0 "RPL4B" "ribosomal protein L4.e.B" ytydr353w - 1,2,1,0 "TRR1" "thioredoxin reductase (NADPH)" 1,3,7,0 "TRR1" "thioredoxin reductase (NADPH)" ytyel054c 40,3,0,0 "RPL12A" "60S large subunit ribosomal protein L12.e" 5,1,0,0 "RPL12A" "60S large subunit ribosomal protein L12.e" ytyer165w 4,5,5,0 "PAB1" "mRNA polyadenylate-binding protein" 40,10,0,0 "PAB1" "mRNA polyadenylate-binding protein" 40,3,0,0 "PAB1" "mRNA polyadenylate-binding protein" 5,4,0,0 "PAB1" "mRNA polyadenylate-binding protein" ytygl103w 40,3,0,0 "RPL28" "60S large subunit ribosomal protein L27a.e" 5,1,0,0 "RPL28" "60S large subunit ribosomal protein L27a.e" ytygr155w - 1,1,1,0 "CYS4" "cystathionine beta-synthase" ytygr217w - 13,1,1,99 "CCH1" "calcium channel protein" 14,4,3,3 "CCH1" "calcium channel protein" 67,1,1,0 "CCH1" "calcium channel protein" ytyhl001w 40,3,0,0 "RPL14B" "ribosomal protein" 5,1,0,0 "RPL14B" "ribosomal protein" ytyhl033c 40,3,0,0 "RPL8A" "60S large subunit ribosomal protein L7a.e.A" 5,1,0,0 "RPL8A" "60S large subunit ribosomal protein L7a.e.A" ytyhr165c - 3,3,1,0 "PRP8" "U5 snRNP protein, pre-mRNA splicing factor" 4,5,5,1 "PRP8" "U5 snRNP protein, pre-mRNA splicing factor" 40,10,0,0 "PRP8" "U5 snRNP protein, pre-mRNA splicing factor" ytyhr203c 40,3,0,0 "RPS4B" "ribosomal protein S4.e.c8" 5,1,0,0 "RPS4B" "ribosomal protein S4.e.c8" ytyil105c - 4,99,0,0 "null" "weak similarity to probable transcription factor ASK10P" ytyir006c - 14,4,3,1 "PAN1" "actin-cytoskeleton assembly protein" 30,4,0,0 "PAN1" "actin-cytoskeleton assembly protein" 40,4,0,0 "PAN1" "actin-cytoskeleton assembly protein" 6,10,0,0 "PAN1" "actin-cytoskeleton assembly protein" 8,19,0,0 "PAN1" "actin-cytoskeleton assembly protein" 8,99,0,0 "PAN1" "actin-cytoskeleton assembly protein" ytyjl080c - 3,3,1,0 "SCP160" "required for maintenance of exact ploidy" 40,10,0,0 "SCP160" "required for maintenance of exact ploidy" 40,7,0,0 "SCP160" "required for maintenance of exact ploidy" ytyjl158c - 11,1,0,0 "CIS3" "strong similarity to PIR1P/HSP150P/PIR3P family" 14,4,3,1 "CIS3" "strong similarity to PIR1P/HSP150P/PIR3P family" ytyjl190c 40,3,0,0 "RPS22A" "ribosomal protein S15a.e.c10" 5,1,0,0 "RPS22A" "ribosomal protein S15a.e.c10" ytyjr047c 40,3,0,0 "ANB1" "translation initiation factor eIF5A.2" 5,4,0,0 "ANB1" "translation initiation factor eIF5A.2" ytyjr145c 40,3,0,0 "RPS4A" "ribosomal protein S4.e.c10" 5,1,0,0 "RPS4A" "ribosomal protein S4.e.c10" ytykl164c - 11,1,0,0 "PIR1" "required for tolerance to heat shock" 40,1,0,0 "PIR1" "required for tolerance to heat shock" ytyll024c - 6,1,0,0 "SSA2" "heat shock protein of HSP70 family, cytosolic" 6,4,0,0 "SSA2" "heat shock protein of HSP70 family, cytosolic" 8,4,0,0 "SSA2" "heat shock protein of HSP70 family, cytosolic" 8,7,0,0 "SSA2" "heat shock protein of HSP70 family, cytosolic" ytylr044c 1,5,1,0 "PDC1" "pyruvate decarboxylase, isozyme 1" 2,13,0,0 "PDC1" "pyruvate decarboxylase, isozyme 1" 2,16,0,0 "PDC1" "pyruvate decarboxylase, isozyme 1" 40,3,0,0 "PDC1" "pyruvate decarboxylase, isozyme 1" ytylr075w 3,3,1,0 "RPL10" "60S large subunit ribosomal protein" 40,3,0,0 "RPL10" "60S large subunit ribosomal protein" 5,1,0,0 "RPL10" "60S large subunit ribosomal protein" 6,10,0,0 "RPL10" "60S large subunit ribosomal protein" ytylr109w - 11,1,0,0 "AHP1" "Alkyl hydroperoxide reductase" 13,1,1,1 "AHP1" "Alkyl hydroperoxide reductase" 40,19,0,0 "AHP1" "Alkyl hydroperoxide reductase" ytylr325c 40,3,0,0 "RPL38" "60S large subunit ribosomal protein" 5,1,0,0 "RPL38" "60S large subunit ribosomal protein" ytylr388w 40,3,0,0 "RPS29A" "ribosomal protein S29.e.A" 5,1,0,0 "RPS29A" "ribosomal protein S29.e.A" ytylr432w - 1,3,1,0 "IMD3" "strong similarity to IMP dehydrogenases, Pur5p and YML056c" ytylr441c 14,4,3,3 "RPS1A" "ribosomal protein S3a.e" 40,3,0,0 "RPS1A" "ribosomal protein S3a.e" 5,1,0,0 "RPS1A" "ribosomal protein S3a.e" ytynl031c - 4,5,1,4 "HHT2" "histone H3" 40,10,3,0 "HHT2" "histone H3" ytynl096c 40,3,0,0 "RPS7B" "strong similarity to ribosomal protein S7" 5,1,0,0 "RPS7B" "strong similarity to ribosomal protein S7" ytynl162w 40,3,0,0 "RPL42A" "ribosomal protein L36a.e" 5,1,0,0 "RPL42A" "ribosomal protein L36a.e" ytynl244c 40,3,0,0 "SUI1" "translation initiation factor 3 (eIF3)" 5,4,0,0 "SUI1" "translation initiation factor 3 (eIF3)" ytynl302c 40,3,0,0 "RPS19B" "40S small subunit ribosomal protein S19.e" 5,1,0,0 "RPS19B" "40S small subunit ribosomal protein S19.e" ytyol121c 40,3,0,0 "RPS19A" "40S small subunit ribosomal protein S19.e" 5,1,0,0 "RPS19A" "40S small subunit ribosomal protein S19.e" ytyor133w 40,3,0,0 "EFT1" "translation elongation factor eEF2" 5,4,0,0 "EFT1" "translation elongation factor eEF2" ytyor153w - 1,6,13,0 "PDR5" "pleiotropic drug resistance protein" 11,7,0,0 "PDR5" "pleiotropic drug resistance protein" 13,1,1,1 "PDR5" "pleiotropic drug resistance protein" 40,2,0,0 "PDR5" "pleiotropic drug resistance protein" 67,4,1,2 "PDR5" "pleiotropic drug resistance protein" 67,50,25,0 "PDR5" "pleiotropic drug resistance protein" ytyor247w - 11,7,0,0 "SRL1" "similarity to vanadate sensitive suppressor SVS1P" ytyor361c 14,4,3,5 "PRT1" "translation initiation factor eIF3 subunit" 3,3,1,0 "PRT1" "translation initiation factor eIF3 subunit" 40,3,0,0 "PRT1" "translation initiation factor eIF3 subunit" 5,4,0,0 "PRT1" "translation initiation factor eIF3 subunit" ytypl106c 11,1,0,0 "SSE1" "heat shock protein of HSP70 family" 13,11,3,1 "SSE1" "heat shock protein of HSP70 family" 14,1,3,99 "SSE1" "heat shock protein of HSP70 family" 40,3,0,0 "SSE1" "heat shock protein of HSP70 family" ytypl218w - 40,9,0,0 "SAR1" "GTP-binding protein of the ARF family" 8,7,0,0 "SAR1" "GTP-binding protein of the ARF family" ytypl226w - 5,4,0,0 "NEW1" "similarity to translation elongation factor eEF3" 67,50,25,0 "NEW1" "similarity to translation elongation factor eEF3" ytypr010c - 4,1,1,0 "RPA135" "DNA-directed RNA polymerase I, 135 KD subunit" 40,10,0,0 "RPA135" "DNA-directed RNA polymerase I, 135 KD subunit" ytypr102c 40,3,0,0 "RPL11A" "ribosomal protein L11.e" 5,1,0,0 "RPL11A" "ribosomal protein L11.e" Validation Accuracy: 30/52 (57.69%) Validation Frequency class '40/3/0/0': 114/843 (13.52%) Evaluation on propertest data (1276 items): ytyhr007c - 1,6,1,0 "ERG11" "cytochrome P450 lanosterol 14a-demethylase" 11,7,1,0 "ERG11" "cytochrome P450 lanosterol 14a-demethylase" 40,7,0,0 "ERG11" "cytochrome P450 lanosterol 14a-demethylase" ytyar071w - 1,4,1,0 "PHO11" "secreted acid phosphatase" 40,27,0,0 "PHO11" "secreted acid phosphatase" ytyar073w - 1,3,1,0 "IMD1" "strong similarity to IMP dehydrogenases" ytybl002w - 4,5,1,4 "HTB2" "histone H2B.2" 40,10,3,0 "HTB2" "histone H2B.2" ytybl027w 40,3,0,0 "RPL19B" "60S large subunit ribosomal protein L19.e" 5,1,0,0 "RPL19B" "60S large subunit ribosomal protein L19.e" ytybl039c 1,3,4,0 "URA7" "CTP synthase 1" 30,1,0,0 "URA7" "CTP synthase 1" 40,3,0,0 "URA7" "CTP synthase 1" ytybl072c 40,3,0,0 "RPS8A" "ribosomal protein S8.e" 5,1,0,0 "RPS8A" "ribosomal protein S8.e" ytybr048w 40,3,0,0 "RPS11B" "ribosomal protein S11.e.B" 5,1,0,0 "RPS11B" "ribosomal protein S11.e.B" ytybr092c - 1,4,1,0 "PHO3" "constitutive acid phosphatase precursor" 1,7,4,0 "PHO3" "constitutive acid phosphatase precursor" 40,27,0,0 "PHO3" "constitutive acid phosphatase precursor" ytybr112c - 4,5,1,4 "CYC8" "general repressor of transcription" 40,10,0,0 "CYC8" "general repressor of transcription" ytybr118w 40,3,0,0 "TEF2" "translation elongation factor eEF1 alpha-A chain, cytosolic" 5,4,0,0 "TEF2" "translation elongation factor eEF1 alpha-A chain, cytosolic" ytybr121c 40,3,0,0 "GRS1" "glycine--tRNA ligase" 5,10,0,0 "GRS1" "glycine--tRNA ligase" ytybr156c - 3,3,1,0 "SLI15" "Mitotic spindle protein involved in chromosome segregation" ytycl001w - 30,7,0,0 "RER1" "required for correct localization of SEC12P" 40,7,0,0 "RER1" "required for correct localization of SEC12P" 40,8,0,0 "RER1" "required for correct localization of SEC12P" 6,4,0,0 "RER1" "required for correct localization of SEC12P" ytycr031c 40,3,0,0 "RPS14A" "40S Ribosomal protein S14.e" 5,1,0,0 "RPS14A" "40S Ribosomal protein S14.e" ytydl051w - 4,3,0,0 "LHP1" "RNA binding protein" 4,99,0,0 "LHP1" "RNA binding protein" ytydl055c - 1,5,1,0 "PSA1" "mannose-1-phosphate guanyltransferase" 30,1,0,0 "PSA1" "mannose-1-phosphate guanyltransferase" ytydl058w 40,3,0,0 "USO1" "intracellular protein transport protein" 8,7,0,0 "USO1" "intracellular protein transport protein" ytydl081c 40,3,0,0 "RPP1A" "60S large subunit acidic ribosomal protein a1" 5,1,0,0 "RPP1A" "60S large subunit acidic ribosomal protein a1" 5,4,0,0 "RPP1A" "60S large subunit acidic ribosomal protein a1" ytydl083c 40,3,0,0 "RPS16B" "ribosomal protein S16.e" 5,1,0,0 "RPS16B" "ribosomal protein S16.e" ytydl084w - 4,5,5,1 "SUB2" "probably involved in pre-mRNA splicing" ytydl100c - 11,7,0,0 "null" "similarity to E.coli arsenical pump-driving ATPase" ytydl182w - 1,1,1,0 "LYS20" "homocitrate synthase" 1,5,1,0 "LYS20" "homocitrate synthase" 40,10,0,0 "LYS20" "homocitrate synthase" ytydl208w - 4,1,4,0 "NHP2" "nucleolar rRNA processing protein" 40,10,0,0 "NHP2" "nucleolar rRNA processing protein" ytydr050c 1,5,1,0 "TPI1" "triose-phosphate isomerase" 2,1,0,0 "TPI1" "triose-phosphate isomerase" 40,3,0,0 "TPI1" "triose-phosphate isomerase" ytydr062w - 1,6,1,0 "LCB2" "serine C-palmitoyltransferase subunit" ytydr382w 40,3,0,0 "RPP2B" "60S large subunit acidic ribosomal protein" 5,1,0,0 "RPP2B" "60S large subunit acidic ribosomal protein" ytydr418w 40,3,0,0 "RPL12B" "60S large subunit ribosomal protein L12.e" 5,1,0,0 "RPL12B" "60S large subunit ribosomal protein L12.e" ytyel026w - 4,5,5,1 "SNU13" "component of the U4/U6.U5 snRNP" ytyer043c - 1,7,1,0 "SAH1" "S-adenosyl-L-homocysteine hydrolase" ytyer074w 40,3,0,0 "RPS24A" "40s small subunit ribosomal protein S24.e" 5,1,0,0 "RPS24A" "40s small subunit ribosomal protein S24.e" ytyer120w - 1,5,4,0 "SCS2" "required for inositol metabolism" 4,5,1,4 "SCS2" "required for inositol metabolism" 40,7,0,0 "SCS2" "required for inositol metabolism" ytyer172c - 4,5,5,1 "BRR2" "RNA helicase-related protein" 40,10,0,0 "BRR2" "RNA helicase-related protein" ytyfl001w 4,3,6,0 "DEG1" "pseudouridine synthase" 40,10,0,0 "DEG1" "pseudouridine synthase" 40,3,0,0 "DEG1" "pseudouridine synthase" ytygl008c - 13,1,1,3 "PMA1" "H+-transporting P-type ATPase, major isoform, plasma membrane" 40,2,0,0 "PMA1" "H+-transporting P-type ATPase, major isoform, plasma membrane" 67,4,1,2 "PMA1" "H+-transporting P-type ATPase, major isoform, plasma membrane" 67,50,22,0 "PMA1" "H+-transporting P-type ATPase, major isoform, plasma membrane" ytygl031c 40,3,0,0 "RPL24A" "60S large subunit ribosomal protein L24.e.A" 5,1,0,0 "RPL24A" "60S large subunit ribosomal protein L24.e.A" ytygl123w 40,3,0,0 "RPS2" "40S small subunit ribosomal protein" 5,1,0,0 "RPS2" "40S small subunit ribosomal protein" ytygl135w 40,3,0,0 "RPL1B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL1B" "60S large subunit ribosomal protein" ytygl253w 1,5,1,0 "HXK2" "hexokinase II" 1,5,4,0 "HXK2" "hexokinase II" 2,1,0,0 "HXK2" "hexokinase II" 40,10,0,0 "HXK2" "hexokinase II" 40,3,0,0 "HXK2" "hexokinase II" ytygr034w 40,3,0,0 "RPL26B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL26B" "60S large subunit ribosomal protein" ytygr085c 40,3,0,0 "RPL11B" "ribosomal protein" 5,1,0,0 "RPL11B" "ribosomal protein" ytygr124w - 1,1,1,0 "ASN2" "asparagine synthetase" ytygr240c 1,5,1,0 "PFK1" "6-phosphofructokinase, alpha subunit" 1,5,4,0 "PFK1" "6-phosphofructokinase, alpha subunit" 2,1,0,0 "PFK1" "6-phosphofructokinase, alpha subunit" 40,3,0,0 "PFK1" "6-phosphofructokinase, alpha subunit" ytyhr076w - 2,99,0,0 "null" "weak similarity to C.elegans hypothetical protein CEW09D10" 40,16,0,0 "null" "weak similarity to C.elegans hypothetical protein CEW09D10" ytyhr089c - 4,1,4,0 "GAR1" "nucleolar rRNA processing protein" 40,10,0,0 "GAR1" "nucleolar rRNA processing protein" ytyhr099w - 4,5,1,4 "TRA1" "component of the Ada-Spt transcriptional regulatory complex" ytyhr216w - 1,3,1,0 "IMD2" "IMP dehydrogenase" ytyil053w - 1,5,1,0 "RHR2" "DL-glycerol phosphatase" ytyil069c 40,3,0,0 "RPS24B" "40S small subunit ribosomal protein S24.e" 5,1,0,0 "RPS24B" "40S small subunit ribosomal protein S24.e" ytyil075c - 4,3,3,0 "RPN2" "26S proteasome regulatory subunit" 40,10,0,0 "RPN2" "26S proteasome regulatory subunit" 40,7,0,0 "RPN2" "26S proteasome regulatory subunit" 6,13,1,0 "RPN2" "26S proteasome regulatory subunit" ytyjl029c - 40,8,0,0 "VPS53" "subunit of VP52-54 complex, required for protein sorting at the yeast late Golgi" 8,7,0,0 "VPS53" "subunit of VP52-54 complex, required for protein sorting at the yeast late Golgi" ytyjl130c - 1,3,4,0 "URA2" "multifunctional pyrimidine biosynthesis protein" 40,10,0,0 "URA2" "multifunctional pyrimidine biosynthesis protein" ytyjl138c 40,3,0,0 "TIF2" "translation initiation factor eIF4A" 5,4,0,0 "TIF2" "translation initiation factor eIF4A" ytykl060c 1,5,1,0 "FBA1" "fructose-bisphosphate aldolase" 2,1,0,0 "FBA1" "fructose-bisphosphate aldolase" 40,3,0,0 "FBA1" "fructose-bisphosphate aldolase" ytykl080w - 13,1,1,1 "VMA5" "H+-ATPase V1 domain 42 KD subunit, vacuolar" 40,25,0,0 "VMA5" "H+-ATPase V1 domain 42 KD subunit, vacuolar" 6,10,0,0 "VMA5" "H+-ATPase V1 domain 42 KD subunit, vacuolar" 67,4,1,2 "VMA5" "H+-ATPase V1 domain 42 KD subunit, vacuolar" 67,50,22,0 "VMA5" "H+-ATPase V1 domain 42 KD subunit, vacuolar" 8,13,0,0 "VMA5" "H+-ATPase V1 domain 42 KD subunit, vacuolar" ytykr059w 40,3,0,0 "TIF1" "translation initiation factor 4A" 5,4,0,0 "TIF1" "translation initiation factor 4A" ytyll045c 40,3,0,0 "RPL8B" "60s large subunit ribosomal protein L7a.e.B" 5,1,0,0 "RPL8B" "60s large subunit ribosomal protein L7a.e.B" ytylr264w 40,3,0,0 "RPS28B" "40S small subunit ribosomal protein S28.e.c12" 5,1,0,0 "RPS28B" "40S small subunit ribosomal protein S28.e.c12" ytylr286c - 1,5,1,0 "CTS1" "endochitinase" 3,3,3,0 "CTS1" "endochitinase" 40,27,0,0 "CTS1" "endochitinase" ytylr354c 1,5,1,0 "TAL1" "transaldolase" 2,7,0,0 "TAL1" "transaldolase" 40,3,0,0 "TAL1" "transaldolase" ytylr355c - 1,1,1,0 "ILV5" "ketol-acid reducto-isomerase" 40,16,0,0 "ILV5" "ketol-acid reducto-isomerase" ytylr367w 40,3,0,0 "RPS22B" "ribosomal protein S15a.e.c12" 5,1,0,0 "RPS22B" "ribosomal protein S15a.e.c12" ytyml063w 40,3,0,0 "RPS1B" "ribosomal protein S3a.e" 5,1,0,0 "RPS1B" "ribosomal protein S3a.e" ytyml123c - 1,4,7,0 "PHO84" "high-affinity inorganic phosphate/H+ symporter" 13,1,1,3 "PHO84" "high-affinity inorganic phosphate/H+ symporter" 13,1,3,3 "PHO84" "high-affinity inorganic phosphate/H+ symporter" 40,2,0,0 "PHO84" "high-affinity inorganic phosphate/H+ symporter" 67,4,7,0 "PHO84" "high-affinity inorganic phosphate/H+ symporter" 67,7,0,0 "PHO84" "high-affinity inorganic phosphate/H+ symporter" 8,19,0,0 "PHO84" "high-affinity inorganic phosphate/H+ symporter" ytymr121c 40,3,0,0 "RPL15B" "60S large subunit ribosomal protein L15.e.c13" 5,1,0,0 "RPL15B" "60S large subunit ribosomal protein L15.e.c13" ytymr217w - 1,3,1,0 "GUA1" "GMP synthase (glutamine-hydrolyzing)" ytymr242c 40,3,0,0 "RPL20A" "60s large subunit ribosomal protein" 5,1,0,0 "RPL20A" "60s large subunit ribosomal protein" ytynl061w - 4,1,4,0 "NOP2" "nucleolar protein" 40,10,0,0 "NOP2" "nucleolar protein" ytynl069c 40,3,0,0 "RPL16B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL16B" "60S large subunit ribosomal protein" ytynl119w - 5,1,0,0 "null" "weak similarity to M.jannaschii hypothetical protein MJ1257" ytynl209w 40,3,0,0 "SSB2" "heat shock protein of HSP70 family, cytosolic" 5,99,0,0 "SSB2" "heat shock protein of HSP70 family, cytosolic" ytynl271c - 14,4,3,1 "BNI1" "regulator of budding" 14,4,3,3 "BNI1" "regulator of budding" 3,3,3,0 "BNI1" "regulator of budding" 40,4,0,0 "BNI1" "regulator of budding" ytyol039w 40,3,0,0 "RPP2A" "acidic ribosomal protein P2.beta" 5,1,0,0 "RPP2A" "acidic ribosomal protein P2.beta" ytyol040c 40,3,0,0 "RPS15" "40S small subunit ribosomal protein" 5,1,0,0 "RPS15" "40S small subunit ribosomal protein" ytyol086c 1,5,1,0 "ADH1" "alcohol dehydrogenase I" 2,16,0,0 "ADH1" "alcohol dehydrogenase I" 40,3,0,0 "ADH1" "alcohol dehydrogenase I" ytyor063w 40,3,0,0 "RPL3" "60S large subunit ribosomal protein L3.e" 5,1,0,0 "RPL3" "60S large subunit ribosomal protein L3.e" ytyor167c 40,3,0,0 "RPS28A" "40S small subunit ribosomal protein S28.e.c15" 5,1,0,0 "RPS28A" "40S small subunit ribosomal protein S28.e.c15" ytyor357c 40,3,0,0 "GRD19" "involved in retrieval of late Golgi membrane proteins from the prevacuolar compartment" 6,4,0,0 "GRD19" "involved in retrieval of late Golgi membrane proteins from the prevacuolar compartment" ytypl090c 40,3,0,0 "RPS6A" "ribosomal protein S6.e" 5,1,0,0 "RPS6A" "ribosomal protein S6.e" ytypl143w 40,3,0,0 "RPL33A" "ribosomal protein L35a.e.c16" 5,1,0,0 "RPL33A" "ribosomal protein L35a.e.c16" ytypl153c - 10,1,99,0 "RAD53" "ser/thr/tyr protein kinase" 3,1,5,1 "RAD53" "ser/thr/tyr protein kinase" 3,3,1,3 "RAD53" "ser/thr/tyr protein kinase" 40,10,0,0 "RAD53" "ser/thr/tyr protein kinase" ytypl204w - 3,1,5,1 "HRR25" "casein kinase I, ser/thr/tyr protein kinase" 3,3,2,0 "HRR25" "casein kinase I, ser/thr/tyr protein kinase" 40,10,0,0 "HRR25" "casein kinase I, ser/thr/tyr protein kinase" ytypl220w 40,3,0,0 "RPL1A" "ribosomal protein" 5,1,0,0 "RPL1A" "ribosomal protein" ytypl237w 40,3,0,0 "SUI3" "translation initiation factor eIF2 beta subunit" 5,4,0,0 "SUI3" "translation initiation factor eIF2 beta subunit" ytypl256c 14,4,3,1 "CLN2" "cyclin, G1/S-specific" 14,4,3,3 "CLN2" "cyclin, G1/S-specific" 3,1,3,0 "CLN2" "cyclin, G1/S-specific" 3,3,1,0 "CLN2" "cyclin, G1/S-specific" 40,3,0,0 "CLN2" "cyclin, G1/S-specific" ytypr145w 1,1,1,0 "ASN1" "asparagine synthetase" 40,3,0,0 "ASN1" "asparagine synthetase" ytypl231w 1,6,1,0 "FAS2" "fatty-acyl-CoA synthase, alpha chain" 40,3,0,0 "FAS2" "fatty-acyl-CoA synthase, alpha chain" 6,10,0,0 "FAS2" "fatty-acyl-CoA synthase, alpha chain" Propertest Accuracy: 48/87 (55.17%) Propertest Frequency class '40/3/0/0': 193/1276 (15.13%) New (unknown) data (843 items): ytybl112c - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytybl113c - 99,0,0,0 "null" "similarity to Y' ORFs" ytybr025c - 99,0,0,0 "null" "strong similarity to Ylf1p" ytybr032w - 99,0,0,0 "null" "hypothetical protein" ytybr090c - 99,0,0,0 "null" "questionable ORF" ytybr162c - 99,0,0,0 "TOS1" "similarity to hypothetical protein YJL171c" ytybr187w - 99,0,0,0 "null" "similarity to mouse putative transmembrane protein FT27" ytycr033w - 99,0,0,0 "null" "similarity to nuclear receptor co-repressor N-Cor" ytydl050c - 99,0,0,0 "null" "questionable ORF" ytydl060w - 99,0,0,0 "TSR1" "similarity to C.elegans hypothetical protein" ytydl228c - 99,0,0,0 "null" "similarity to A.klebsiana glutamate dehydrogenase" ytydr154c - 99,0,0,0 "null" "questionable ORF" ytydr366c - 99,0,0,0 "null" "similarity to YOL106w and YER181c" ytydr417c - 99,0,0,0 "null" "questionable ORF" ytyel001c - 99,0,0,0 "null" "hypothetical protein" ytyel077c - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytyer093c - 99,0,0,0 "null" "weak similarity to S.epidermidis PepB protein" ytyfl007w - 99,0,0,0 "BLM3" "weak similarity to Mms19p" ytyfl067w - 99,0,0,0 "null" "similarity to mouse period clock protein" ytygl102c - 99,0,0,0 "null" "questionable ORF" ytygr160w - 99,0,0,0 "FYV13" "weak similarity to C. elegans Y113G7B.12 protein of unknown function" ytyhl050c - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytyhr017w - 99,0,0,0 "YSC83" "strong similarity to S.douglasii YSD83" ytyhr078w - 99,0,0,0 "null" "hypothetical protein" ytyhr085w - 99,0,0,0 "null" "weak similarity to fruit fly brahma transcriptional activator" ytyhr219w - 99,0,0,0 "null" "strong similarity to other subtelomeric encoded proteins" ytyil039w - 99,0,0,0 "null" "weak similarity to hypothetical protein SPAC23A1.02c S. pombe" ytyil102c - 99,0,0,0 "null" "strong similarity to YIL014c-a" ytyil104c - 99,0,0,0 "null" "similarity to hypothetical S. pombe protein" ytyjr115w - 99,0,0,0 "null" "similarity to hypothetical protein YBL043w" ytykl153w - 99,0,0,0 "null" "questionable ORF" ytylr062c - 99,0,0,0 "BUD28" "questionable ORF" ytylr076c - 99,0,0,0 "null" "questionable ORF" ytylr087c - 99,0,0,0 "CSF1" "weak similarity to hypothetical protein D. melanogaster" ytylr198c - 99,0,0,0 "null" "questionable ORF" ytylr339c - 99,0,0,0 "null" "questionable ORF" ytylr413w - 99,0,0,0 "null" "strong similarity to YKL187c" ytylr437c - 99,0,0,0 "null" "hypothetical protein" ytyml072c - 99,0,0,0 "null" "similarity to YOR3141c and YNL087w" ytymr305c - 98,0,0,0 "SCW10" "similarity to B.japonicum putative beta-(-6)glucan transferase" ytynl013c - 99,0,0,0 "null" "questionable ORF" ytynl127w - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein" ytynl190w - 99,0,0,0 "null" "weak similarity to MUCIN 1 PRECURSOR Mesocricetus auratus (Golden hamster)" ytynl303w - 99,0,0,0 "null" "hypothetical protein" ytynr021w - 99,0,0,0 "null" "weak similarity to hypothetical protein S. pombe" ytyol106w - 99,0,0,0 "null" "questionable ORF - identified by SAGE" ytyor248w - 99,0,0,0 "TOS11" "hypothetical protein" ytyor309c - 99,0,0,0 "null" "questionable ORF" ytypl142c - 99,0,0,0 "null" "questionable ORF" ytypl238c - 99,0,0,0 "null" "questionable ORF" ytypr204w - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ------------------ Rule 74: g4_bkg <= 1212 r7_ratio <= 0.48 g2dashbkg > 4217 -> class 40/3/0/0 "cytoplasm" Evaluation on training data (1607 items): ytyal035w 40,3,0,0 "FUN12" "general translation factor eIF2 homolog" 5,4,1,0 "FUN12" "general translation factor eIF2 homolog" ytydl061c 40,3,0,0 "RPS29B" "ribosomal protein S29.e.B" 5,1,0,0 "RPS29B" "ribosomal protein S29.e.B" ytydl075w 40,3,0,0 "RPL31A" "60S large subunit ribosomal protein L31.e" 5,1,0,0 "RPL31A" "60S large subunit ribosomal protein L31.e" ytydl111c - 4,1,4,0 "RRP42" "rRNA processing protein" ytydl191w 40,3,0,0 "RPL35A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL35A" "60S large subunit ribosomal protein" ytydr023w 40,3,0,0 "SES1" "seryl-tRNA synthetase, cytosolic" 5,10,0,0 "SES1" "seryl-tRNA synthetase, cytosolic" ytydr025w 40,3,0,0 "RPS11A" "ribosomal protein S11.e" 5,1,0,0 "RPS11A" "ribosomal protein S11.e" ytydr341c 40,3,0,0 "null" "arginyl-tRNA synthetase, cytosolic" 5,10,0,0 "null" "arginyl-tRNA synthetase, cytosolic" ytydr447c 40,3,0,0 "RPS17B" "ribosomal protein S17.e.B" 5,1,0,0 "RPS17B" "ribosomal protein S17.e.B" ytyer025w 40,3,0,0 "GCD11" "translation initiation factor eIF2 gamma chain" 5,4,0,0 "GCD11" "translation initiation factor eIF2 gamma chain" ytyer110c 40,10,0,0 "KAP123" "RAN-binding protein" 40,3,0,0 "KAP123" "RAN-binding protein" 6,4,0,0 "KAP123" "RAN-binding protein" 8,1,0,0 "KAP123" "RAN-binding protein" ytygl029w - 30,99,0,0 "CGR1" "Coiled-coil protein, may play a role in ribosome biogenesis" ytygl105w 4,3,6,0 "ARC1" "protein with specific affinity for G4 quadruplex nucleic acids" 40,3,0,0 "ARC1" "protein with specific affinity for G4 quadruplex nucleic acids" ytygl147c 40,3,0,0 "RPL9A" "ribosomal protein L9.e" 5,1,0,0 "RPL9A" "ribosomal protein L9.e" ytygl189c 40,3,0,0 "RPS26A" "40S small subunit ribosomal protein S26e.c7" 5,1,0,0 "RPS26A" "40S small subunit ribosomal protein S26e.c7" ytygr148c 40,3,0,0 "RPL24B" "60S large subunit ribosomal protein L24.e.B" 5,1,0,0 "RPL24B" "60S large subunit ribosomal protein L24.e.B" ytygr214w 14,4,3,1 "RPS0A" "40S ribosomal protein p40 homolog A" 40,3,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" 5,1,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" 6,10,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" ytyhr010w 40,3,0,0 "RPL27A" "60S large subunit ribosomal protein L27.e" 5,1,0,0 "RPL27A" "60S large subunit ribosomal protein L27.e" ytyhr128w 1,3,4,0 "FUR1" "uracil phosphoribosyltransferase" 40,3,0,0 "FUR1" "uracil phosphoribosyltransferase" ytyil052c 40,3,0,0 "RPL34B" "ribosomal protein L34.e" 5,1,0,0 "RPL34B" "ribosomal protein L34.e" ytyil066c 1,3,7,0 "RNR3" "ribonucleotide reductase, repair inducible large subunit" 3,1,3,0 "RNR3" "ribonucleotide reductase, repair inducible large subunit" 3,1,5,1 "RNR3" "ribonucleotide reductase, repair inducible large subunit" 40,3,0,0 "RNR3" "ribonucleotide reductase, repair inducible large subunit" ytyil133c 40,3,0,0 "RPL16A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL16A" "60S large subunit ribosomal protein" ytyjr016c - 1,1,1,0 "ILV3" "dihydroxy-acid dehydratase" 40,16,0,0 "ILV3" "dihydroxy-acid dehydratase" ytyjr143c - 1,5,1,0 "PMT4" "dolichyl-phosphate-mannose--protein O-mannosyl transferase" 40,7,0,0 "PMT4" "dolichyl-phosphate-mannose--protein O-mannosyl transferase" 6,7,0,0 "PMT4" "dolichyl-phosphate-mannose--protein O-mannosyl transferase" ytykl006w 40,3,0,0 "RPL14A" "ribosomal protein" 5,1,0,0 "RPL14A" "ribosomal protein" ytykl181w - 1,1,1,0 "PRS1" "ribose-phosphate pyrophosphokinase" 1,3,1,0 "PRS1" "ribose-phosphate pyrophosphokinase" 1,3,4,0 "PRS1" "ribose-phosphate pyrophosphokinase" 14,4,3,1 "PRS1" "ribose-phosphate pyrophosphokinase" ytylr017w - 1,3,1,0 "MEU1" "multiple enhancer of UAS2" ytylr029c 40,3,0,0 "RPL15A" "60s large subunit ribosomal protein L15.e.c12" 5,1,0,0 "RPL15A" "60s large subunit ribosomal protein L15.e.c12" ytylr061w - 5,1,0,0 "RPL22A" "ribosomal protein" ytylr175w - 14,1,0,0 "CBF5" "putative rRNA pseuduridine synthase" 3,3,1,0 "CBF5" "putative rRNA pseuduridine synthase" 30,4,0,0 "CBF5" "putative rRNA pseuduridine synthase" 4,1,4,0 "CBF5" "putative rRNA pseuduridine synthase" 40,10,0,0 "CBF5" "putative rRNA pseuduridine synthase" ytylr249w 30,1,0,0 "YEF3" "translation elongation factor eEF3" 40,3,0,0 "YEF3" "translation elongation factor eEF3" 5,4,0,0 "YEF3" "translation elongation factor eEF3" ytylr359w - 1,3,1,0 "ADE13" "adenylosuccinate lyase" ytylr449w - 6,1,0,0 "FPR4" "nucleolar peptidylprolyl cis-trans isomerase (PPIase)" ytyml022w - 1,3,1,0 "APT1" "adenine phosphoribosyltransferase" ytymr309c 40,3,0,0 "NIP1" "associated with 40s ribosomal subunit" 5,4,0,0 "NIP1" "associated with 40s ribosomal subunit" ytynl178w 40,3,0,0 "RPS3" "ribosomal protein S3.e" 5,1,0,0 "RPS3" "ribosomal protein S3.e" ytyol139c 14,4,3,5 "CDC33" "translation initiation factor eIF4E" 40,3,0,0 "CDC33" "translation initiation factor eIF4E" 5,4,0,0 "CDC33" "translation initiation factor eIF4E" ytyol061w - 1,1,1,0 "PRS5" "ribose-phosphate pyrophosphokinases" 1,3,1,0 "PRS5" "ribose-phosphate pyrophosphokinases" 1,3,4,0 "PRS5" "ribose-phosphate pyrophosphokinases" ytyor234c - 5,1,0,0 "RPL33B" "ribosomal protein L35a.e.c15" ytyor260w 40,3,0,0 "GCD1" "translation initiation factor eIF2bgamma subunit" 5,4,0,0 "GCD1" "translation initiation factor eIF2bgamma subunit" ytyor276w 40,3,0,0 "CAF20" "mRNA CAP-binding protein (eIF4F), 20K subunit" 5,4,0,0 "CAF20" "mRNA CAP-binding protein (eIF4F), 20K subunit" ytyor298w - 14,4,3,5 "MUM3" "required for meiosis" 3,3,2,0 "MUM3" "required for meiosis" ytyor326w - 14,4,3,1 "MYO2" "myosin heavy chain" 30,25,0,0 "MYO2" "myosin heavy chain" 40,4,0,0 "MYO2" "myosin heavy chain" 8,16,0,0 "MYO2" "myosin heavy chain" 8,22,0,0 "MYO2" "myosin heavy chain" 8,7,0,0 "MYO2" "myosin heavy chain" ytyor369c 40,3,0,0 "RPS12" "40S small subunit acidic ribosomal protein S12" 5,1,0,0 "RPS12" "40S small subunit acidic ribosomal protein S12" ytypl032c - 14,1,0,0 "SVL3" "strong similarity to PAM1P" 14,4,3,1 "SVL3" "strong similarity to PAM1P" ytypl131w 40,3,0,0 "RPL5" "60S large subunit ribosomal protein L5.e" 5,1,0,0 "RPL5" "60S large subunit ribosomal protein L5.e" ytypl242c 14,1,0,0 "IQG1" "involved in cytokinesis, has similarity to mammalian IQGAP proteins" 14,4,3,1 "IQG1" "involved in cytokinesis, has similarity to mammalian IQGAP proteins" 3,3,3,0 "IQG1" "involved in cytokinesis, has similarity to mammalian IQGAP proteins" 40,3,0,0 "IQG1" "involved in cytokinesis, has similarity to mammalian IQGAP proteins" ytypl243w 40,3,0,0 "SRP68" "signal recognition particle protein" 6,4,0,0 "SRP68" "signal recognition particle protein" ytypr033c 40,10,0,0 "HTS1" "histidine--tRNA ligase, mitochondrial" 40,3,0,0 "HTS1" "histidine--tRNA ligase, mitochondrial" 5,10,0,0 "HTS1" "histidine--tRNA ligase, mitochondrial" ytypr110c - 4,1,1,0 "RPC40" "DNA-directed RNA polymerase I, III 40 KD subunit" 4,3,1,0 "RPC40" "DNA-directed RNA polymerase I, III 40 KD subunit" 40,10,0,0 "RPC40" "DNA-directed RNA polymerase I, III 40 KD subunit" ytypr125w - 4,5,5,1 "MRS7" "suppressor of MRS2-1 mutation" ytypr132w 40,3,0,0 "RPS23B" "40S small subunit ribosomal protein S23.e" 5,1,0,0 "RPS23B" "40S small subunit ribosomal protein S23.e" Training Accuracy: 34/52 (65.38%) Training Frequency class '40/3/0/0': 237/1607 (14.75%) Evaluation on validation data (843 items): ytyal023c - 1,5,1,0 "PMT2" "mannosyltransferase" 40,7,0,0 "PMT2" "mannosyltransferase" 6,7,0,0 "PMT2" "mannosyltransferase" ytyal025c - 3,3,1,0 "MAK16" "nuclear viral propagation protein" 40,10,0,0 "MAK16" "nuclear viral propagation protein" ytybl076c 40,3,0,0 "ILS1" "isoleucyl-tRNA synthetase" 5,10,0,0 "ILS1" "isoleucyl-tRNA synthetase" ytybr143c 40,3,0,0 "SUP45" "translational release factor" 5,4,0,0 "SUP45" "translational release factor" ytycr053w 1,1,1,0 "THR4" "threonine synthase (o-p-homoserine p-lyase)" 40,3,0,0 "THR4" "threonine synthase (o-p-homoserine p-lyase)" ytydr321w 1,1,10,0 "ASP1" "asparaginase" 40,3,0,0 "ASP1" "asparaginase" ytyer122c - 3,3,1,0 "GLO3" "zinc finger protein" 4,5,1,4 "GLO3" "zinc finger protein" 40,10,0,0 "GLO3" "zinc finger protein" ytygl103w 40,3,0,0 "RPL28" "60S large subunit ribosomal protein L27a.e" 5,1,0,0 "RPL28" "60S large subunit ribosomal protein L27a.e" ytygr264c 40,3,0,0 "MES1" "methionyl-tRNA synthetase" 5,10,0,0 "MES1" "methionyl-tRNA synthetase" ytyhr203c 40,3,0,0 "RPS4B" "ribosomal protein S4.e.c8" 5,1,0,0 "RPS4B" "ribosomal protein S4.e.c8" ytyjl157c 13,11,3,7 "FAR1" "cyclin-dependent kinase inhibitor (CKI)" 14,4,3,1 "FAR1" "cyclin-dependent kinase inhibitor (CKI)" 14,4,3,3 "FAR1" "cyclin-dependent kinase inhibitor (CKI)" 3,3,1,0 "FAR1" "cyclin-dependent kinase inhibitor (CKI)" 40,10,0,0 "FAR1" "cyclin-dependent kinase inhibitor (CKI)" 40,3,0,0 "FAR1" "cyclin-dependent kinase inhibitor (CKI)" ytyjl189w 40,3,0,0 "RPL39" "60S large subunit ribosomal protein L39.e" 5,1,0,0 "RPL39" "60S large subunit ribosomal protein L39.e" ytyjr145c 40,3,0,0 "RPS4A" "ribosomal protein S4.e.c10" 5,1,0,0 "RPS4A" "ribosomal protein S4.e.c10" ytylr075w 3,3,1,0 "RPL10" "60S large subunit ribosomal protein" 40,3,0,0 "RPL10" "60S large subunit ribosomal protein" 5,1,0,0 "RPL10" "60S large subunit ribosomal protein" 6,10,0,0 "RPL10" "60S large subunit ribosomal protein" ytylr083c - 40,22,0,0 "EMP70" "endosomal protein" 8,7,0,0 "EMP70" "endosomal protein" ytylr179c - 3,3,1,0 "null" "similarity to TFS1P" ytylr197w - 4,1,4,0 "SIK1" "involved in pre-rRNA processing" 40,10,0,0 "SIK1" "involved in pre-rRNA processing" ytylr325c 40,3,0,0 "RPL38" "60S large subunit ribosomal protein" 5,1,0,0 "RPL38" "60S large subunit ribosomal protein" ytylr441c 14,4,3,3 "RPS1A" "ribosomal protein S3a.e" 40,3,0,0 "RPS1A" "ribosomal protein S3a.e" 5,1,0,0 "RPS1A" "ribosomal protein S3a.e" ytyml074c - 40,10,0,0 "NPI46" "proline cis-trans isomerase" 6,1,0,0 "NPI46" "proline cis-trans isomerase" ytynl096c 40,3,0,0 "RPS7B" "strong similarity to ribosomal protein S7" 5,1,0,0 "RPS7B" "strong similarity to ribosomal protein S7" ytynl162w 40,3,0,0 "RPL42A" "ribosomal protein L36a.e" 5,1,0,0 "RPL42A" "ribosomal protein L36a.e" ytynl244c 40,3,0,0 "SUI1" "translation initiation factor 3 (eIF3)" 5,4,0,0 "SUI1" "translation initiation factor 3 (eIF3)" ytynl256w - 1,7,1,0 "FOL1" "Dihydroneopterin aldolase, dihydro-6-hydroxymethylpterin pyrophosphokinase, dihydropteroate synthetase" ytynl312w - 3,1,3,0 "RFA2" "DNA replication factor A, 36 kDa subunit" 40,10,0,0 "RFA2" "DNA replication factor A, 36 kDa subunit" ytyol010w - 4,99,0,0 "RCL1" "similarity to human RNA 3'-terminal phosphate cyclase" ytyol121c 40,3,0,0 "RPS19A" "40S small subunit ribosomal protein S19.e" 5,1,0,0 "RPS19A" "40S small subunit ribosomal protein S19.e" ytyor153w - 1,6,13,0 "PDR5" "pleiotropic drug resistance protein" 11,7,0,0 "PDR5" "pleiotropic drug resistance protein" 13,1,1,1 "PDR5" "pleiotropic drug resistance protein" 40,2,0,0 "PDR5" "pleiotropic drug resistance protein" 67,4,1,2 "PDR5" "pleiotropic drug resistance protein" 67,50,25,0 "PDR5" "pleiotropic drug resistance protein" ytyor247w - 11,7,0,0 "SRL1" "similarity to vanadate sensitive suppressor SVS1P" ytyor370c 1,6,7,0 "MRS6" "geranylgeranyltransferase regulatory subunit" 40,3,0,0 "MRS6" "geranylgeranyltransferase regulatory subunit" 40,7,0,0 "MRS6" "geranylgeranyltransferase regulatory subunit" 40,8,0,0 "MRS6" "geranylgeranyltransferase regulatory subunit" 6,7,0,0 "MRS6" "geranylgeranyltransferase regulatory subunit" ytyor381w - 13,1,1,1 "FRE3" "strong similarity to ferric reductase FRE2P" ytypl019c - 8,13,0,0 "VTC3" "strong similarity to YFL004w, similarity to YJL012c" ytypl226w - 5,4,0,0 "NEW1" "similarity to translation elongation factor eEF3" 67,50,25,0 "NEW1" "similarity to translation elongation factor eEF3" ytypr009w - 8,99,0,0 "null" "similarity to sterol uptake protein SUT1P" ytypr102c 40,3,0,0 "RPL11A" "ribosomal protein L11.e" 5,1,0,0 "RPL11A" "ribosomal protein L11.e" ytypr103w - 14,4,3,5 "PRE2" "20S proteasome subunit (beta5)" 3,3,1,0 "PRE2" "20S proteasome subunit (beta5)" 3,3,2,0 "PRE2" "20S proteasome subunit (beta5)" 40,10,0,0 "PRE2" "20S proteasome subunit (beta5)" 40,7,0,0 "PRE2" "20S proteasome subunit (beta5)" 6,13,1,0 "PRE2" "20S proteasome subunit (beta5)" Validation Accuracy: 19/36 (52.78%) Validation Frequency class '40/3/0/0': 114/843 (13.52%) Evaluation on propertest data (1276 items): ytybl072c 40,3,0,0 "RPS8A" "ribosomal protein S8.e" 5,1,0,0 "RPS8A" "ribosomal protein S8.e" ytybr121c 40,3,0,0 "GRS1" "glycine--tRNA ligase" 5,10,0,0 "GRS1" "glycine--tRNA ligase" ytycr031c 40,3,0,0 "RPS14A" "40S Ribosomal protein S14.e" 5,1,0,0 "RPS14A" "40S Ribosomal protein S14.e" ytydl051w - 4,3,0,0 "LHP1" "RNA binding protein" 4,99,0,0 "LHP1" "RNA binding protein" ytydl081c 40,3,0,0 "RPP1A" "60S large subunit acidic ribosomal protein a1" 5,1,0,0 "RPP1A" "60S large subunit acidic ribosomal protein a1" 5,4,0,0 "RPP1A" "60S large subunit acidic ribosomal protein a1" ytydl083c 40,3,0,0 "RPS16B" "ribosomal protein S16.e" 5,1,0,0 "RPS16B" "ribosomal protein S16.e" ytydr037w 40,3,0,0 "KRS1" "lysyl-tRNA synthetase, cytosolic" 5,10,0,0 "KRS1" "lysyl-tRNA synthetase, cytosolic" ytydr471w 40,3,0,0 "RPL27B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL27B" "60S large subunit ribosomal protein" ytyer002w 40,3,0,0 "NOP16" "weak similarity to chicken microfibril-associated protein" ytyer043c - 1,7,1,0 "SAH1" "S-adenosyl-L-homocysteine hydrolase" ytyer120w - 1,5,4,0 "SCS2" "required for inositol metabolism" 4,5,1,4 "SCS2" "required for inositol metabolism" 40,7,0,0 "SCS2" "required for inositol metabolism" ytyfl045c 1,5,1,0 "SEC53" "phosphomannomutase" 40,3,0,0 "SEC53" "phosphomannomutase" 6,7,0,0 "SEC53" "phosphomannomutase" ytygl031c 40,3,0,0 "RPL24A" "60S large subunit ribosomal protein L24.e.A" 5,1,0,0 "RPL24A" "60S large subunit ribosomal protein L24.e.A" ytygl135w 40,3,0,0 "RPL1B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL1B" "60S large subunit ribosomal protein" ytygr034w 40,3,0,0 "RPL26B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL26B" "60S large subunit ribosomal protein" ytygr060w - 1,6,1,0 "ERG25" "C-4 sterol methyl oxidase" 40,7,0,0 "ERG25" "C-4 sterol methyl oxidase" ytygr162w 40,3,0,0 "TIF4631" "mRNA cap-binding protein (eIF4F), 150K subunit" 5,4,0,0 "TIF4631" "mRNA cap-binding protein (eIF4F), 150K subunit" ytyhr193c 1,5,4,0 "EGD2" "alpha subunit of the nascent polypeptide-associated complex" 4,5,1,4 "EGD2" "alpha subunit of the nascent polypeptide-associated complex" 40,3,0,0 "EGD2" "alpha subunit of the nascent polypeptide-associated complex" ytyjl183w - 6,7,2,0 "MNN11" "related to MNN10P, and in a complex containing other MNN gene products" ytyjl191w 40,3,0,0 "RPS14B" "40S small subunit ribosomal protein S14.e.B" 5,1,0,0 "RPS14B" "40S small subunit ribosomal protein S14.e.B" ytykl191w - 1,1,1,0 "DPH2" "diphtheria toxin resistance protein" ytykr092c - 4,99,0,0 "SRP40" "suppressor of mutant AC40 of RNA polymerase I and III" 40,10,0,0 "SRP40" "suppressor of mutant AC40 of RNA polymerase I and III" ytykr094c 40,3,0,0 "RPL40B" "ubiquitin" 5,1,0,0 "RPL40B" "ubiquitin" 6,13,1,0 "RPL40B" "ubiquitin" ytyll008w - 4,1,4,0 "DRS1" "RNA helicase of the DEAD box family" 40,10,0,0 "DRS1" "RNA helicase of the DEAD box family" 6,10,0,0 "DRS1" "RNA helicase of the DEAD box family" ytylr129w - 3,3,1,0 "DIP2" "DOM34P-interacting protein" 3,3,2,0 "DIP2" "DOM34P-interacting protein" ytylr185w 40,3,0,0 "RPL37A" "ribosomal protein L37.e" 5,1,0,0 "RPL37A" "ribosomal protein L37.e" ytylr303w 1,1,1,0 "MET17" "O-acetylhomoserine sulfhydrylase" 40,3,0,0 "MET17" "O-acetylhomoserine sulfhydrylase" ytylr355c - 1,1,1,0 "ILV5" "ketol-acid reducto-isomerase" 40,16,0,0 "ILV5" "ketol-acid reducto-isomerase" ytylr367w 40,3,0,0 "RPS22B" "ribosomal protein S15a.e.c12" 5,1,0,0 "RPS22B" "ribosomal protein S15a.e.c12" ytyml123c - 1,4,7,0 "PHO84" "high-affinity inorganic phosphate/H+ symporter" 13,1,1,3 "PHO84" "high-affinity inorganic phosphate/H+ symporter" 13,1,3,3 "PHO84" "high-affinity inorganic phosphate/H+ symporter" 40,2,0,0 "PHO84" "high-affinity inorganic phosphate/H+ symporter" 67,4,7,0 "PHO84" "high-affinity inorganic phosphate/H+ symporter" 67,7,0,0 "PHO84" "high-affinity inorganic phosphate/H+ symporter" 8,19,0,0 "PHO84" "high-affinity inorganic phosphate/H+ symporter" ytymr011w - 1,5,7,0 "HXT2" "high-affinity hexose transporter" 40,2,0,0 "HXT2" "high-affinity hexose transporter" 67,7,0,0 "HXT2" "high-affinity hexose transporter" 8,19,0,0 "HXT2" "high-affinity hexose transporter" ytymr146c 40,3,0,0 "TIF34" "translation initiation factor eIF3, p39 subunit" 5,4,0,0 "TIF34" "translation initiation factor eIF3, p39 subunit" ytymr202w - 1,6,1,0 "ERG2" "C-8 sterol isomerase" 40,7,0,0 "ERG2" "C-8 sterol isomerase" ytymr229c - 4,1,4,0 "RRP5" "processing of pre-ribosomal RNA" 40,10,0,0 "RRP5" "processing of pre-ribosomal RNA" ytymr246w - 1,6,1,0 "FAA4" "long-chain-fatty-acid--CoA ligase" 1,6,13,0 "FAA4" "long-chain-fatty-acid--CoA ligase" 1,6,7,0 "FAA4" "long-chain-fatty-acid--CoA ligase" 6,7,0,0 "FAA4" "long-chain-fatty-acid--CoA ligase" ytynl066w - 1,5,0,0 "SUN4" "strong similarity to YIL123w, UTH1P, NCA3P and C. wickerhamii beta-glucosidase protein" 14,20,0,0 "SUN4" "strong similarity to YIL123w, UTH1P, NCA3P and C. wickerhamii beta-glucosidase protein" 40,1,0,0 "SUN4" "strong similarity to YIL123w, UTH1P, NCA3P and C. wickerhamii beta-glucosidase protein" ytynl238w - 14,4,3,3 "KEX2" "endoproteinase of late golgi compartment" 40,8,0,0 "KEX2" "endoproteinase of late golgi compartment" 6,7,0,0 "KEX2" "endoproteinase of late golgi compartment" ytyol127w 40,3,0,0 "RPL25" "ribosomal protein L23a.e" 5,1,0,0 "RPL25" "ribosomal protein L23a.e" ytyol040c 40,3,0,0 "RPS15" "40S small subunit ribosomal protein" 5,1,0,0 "RPS15" "40S small subunit ribosomal protein" ytyor163w - 11,7,99,0 "DDP1" "diadenosine hexaphosphate (Ap6A) hydrolase" ytyor206w - 30,99,0,0 "NOC2" "crucial for intranuclear movement of ribosomal precursor particles" 8,1,0,0 "NOC2" "crucial for intranuclear movement of ribosomal precursor particles" ytyor207c - 4,1,1,0 "RET1" "DNA-directed RNA polymerase III, 130 KD subunit" 4,3,1,0 "RET1" "DNA-directed RNA polymerase III, 130 KD subunit" 40,10,0,0 "RET1" "DNA-directed RNA polymerase III, 130 KD subunit" ytyor341w - 4,1,1,0 "RPA190" "DNA-directed RNA polymerase I, 190 KD alpha subunit" 40,10,0,0 "RPA190" "DNA-directed RNA polymerase I, 190 KD alpha subunit" ytyor357c 40,3,0,0 "GRD19" "involved in retrieval of late Golgi membrane proteins from the prevacuolar compartment" 6,4,0,0 "GRD19" "involved in retrieval of late Golgi membrane proteins from the prevacuolar compartment" ytypl048w 40,3,0,0 "CAM1" "translation elongation factor eEF1 gamma homologue" 5,4,0,0 "CAM1" "translation elongation factor eEF1 gamma homologue" ytypl079w 40,3,0,0 "RPL21B" "ribosomal protein L21" 5,1,0,0 "RPL21B" "ribosomal protein L21" ytypl081w 40,3,0,0 "RPS9A" "ribosomal protein S9.e.A" 5,1,0,0 "RPS9A" "ribosomal protein S9.e.A" ytypl126w - 3,3,1,0 "NAN1" "weak similarity to fruit fly TFIID subunit p85" 40,10,3,0 "NAN1" "weak similarity to fruit fly TFIID subunit p85" ytypl143w 40,3,0,0 "RPL33A" "ribosomal protein L35a.e.c16" 5,1,0,0 "RPL33A" "ribosomal protein L35a.e.c16" ytypl266w - 4,1,4,0 "DIM1" "rRNA (adenine-N6,N6-)-dimethyltransferase" 40,10,0,0 "DIM1" "rRNA (adenine-N6,N6-)-dimethyltransferase" ytypr034w - 40,4,0,0 "ARP7" "component of SWI-SNF global transcription activator complex and RSC chromatin remodeling complex" Propertest Accuracy: 27/51 (52.94%) Propertest Frequency class '40/3/0/0': 193/1276 (15.13%) New (unknown) data (843 items): ytydl063c - 99,0,0,0 "null" "weak similarity to human estrogen-responsive finger protein" ytydl201w - 99,0,0,0 "null" "strong similarity to probable methyltransferase related protein Neurospora crassa" ytydl213c - 99,0,0,0 "FYV14" "weak similarity to potato small nuclear ribonucleoprotein U2B and human splicing factor homolog" ytydr433w - 99,0,0,0 "KRE22" "questionable ORF" ytydr449c - 99,0,0,0 "null" "similarity to hypothetical protein S. pombe" ytyel033w - 99,0,0,0 "null" "weak similarity to Sauroleishmania mitochondrial hypothetical ORF-5 protein" ytyel055c - 98,0,0,0 "POL5" "DNA polymerase V" ytygr160w - 99,0,0,0 "FYV13" "weak similarity to C. elegans Y113G7B.12 protein of unknown function" ytyjl109c - 99,0,0,0 "null" "weak similarity to ATPase DRS2P" ytyjr003c - 99,0,0,0 "null" "hypothetical protein" ytyjr024c - 99,0,0,0 "null" "weak similarity to C.elegans Z49131_E ZC373.5 protein" ytykl082c - 99,0,0,0 "null" "weak similarity to C.elegans hypothetical protein" ytykl153w - 99,0,0,0 "null" "questionable ORF" ytylr301w - 99,0,0,0 "null" "hypothetical protein" ytylr413w - 99,0,0,0 "null" "strong similarity to YKL187c" ytymr049c - 99,0,0,0 "ERB1" "weak similarity to A.thaliana PRL1 protein" ytymr093w - 99,0,0,0 "null" "weak similarity to PWP2P" ytymr298w - 99,0,0,0 "null" "hypothetical protein" ytymr305c - 98,0,0,0 "SCW10" "similarity to B.japonicum putative beta-(-6)glucan transferase" ytymr321c - 99,0,0,0 "null" "strong similarity to hypothetical proteins YPL273w and YLL062c" ytynl002c - 98,0,0,0 "RLP7" "strong similarity to mammalian ribosomal L7 proteins" ytynl010w - 99,0,0,0 "null" "weak similarity to B.subtilis hypothetical protein ykrX" ytynl110c - 99,0,0,0 "null" "weak similarity to fruit fly RNA-binding protein" ytynl114c - 99,0,0,0 "null" "questionable ORF" ytynl123w - 99,0,0,0 "null" "weak similarity to C.jejuni serine protease" ytynl124w - 99,0,0,0 "null" "similarity to hypothetical S. pombe protein" ytynl174w - 99,0,0,0 "null" "hypothetical protein" ytynl308c - 99,0,0,0 "KRI1" "similarity to S.pombe and C.elegans hypothetical proteins" ytynl313c - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein" ytynr021w - 99,0,0,0 "null" "weak similarity to hypothetical protein S. pombe" ytynr046w - 99,0,0,0 "null" "strong similarity to S.pombe hypothetical protein SPAC31A2.02" ytynr051c - 99,0,0,0 "BRE5" "weak similarity to chicken nucleolin" ytynr067c - 98,0,0,0 "null" "similarity to beta-glucan-elicitor receptor - Glycine max" ytyor277c - 99,0,0,0 "null" "questionable ORF" ytyor309c - 99,0,0,0 "null" "questionable ORF" ytyor345c - 99,0,0,0 "null" "questionable ORF" ytyor355w - 98,0,0,0 "GDS1" "NAM9-1 suppressor" ytypl030w - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein" ytypl034w - 99,0,0,0 "null" "questionable ORF" ytypl093w - 99,0,0,0 "NOG1" "similarity to M.jannaschii GTP-binding protein" ytypl183c - 99,0,0,0 "null" "similarity to TAF90P" ytypl244c - 99,0,0,0 "HUT1" "weak similarity to human UDP-galactose transporter related isozyme 1" ytypl245w - 99,0,0,0 "null" "weak similarity to human mutL protein homolog" ytypl246c - 99,0,0,0 "null" "weak similarity to mouse proteinase activated receptor 2" ytypr044c - 99,0,0,0 "null" "questionable ORF" ytypr112c - 98,0,0,0 "MRD1" "similarity to RNA-binding proteins" ytyhr098c - 99,0,0,0 "SFB3" "similarity to human hypothetical protein" ------------------