Rule 583: cellcycle_cdc15_200 <= 0.52 cellcycle_cdc28_20 <= 0.63 gasch1_Heat_Shock_10_minutes_hs_1 <= 0.7 gasch1_Heat_Shock_000_minutes_hs_2 > -0.42 gasch1_constant_0point32_mM_H2O2_80_min_redo <= 0.29 gasch1_YPD_8_h_ypd_2 <= 0.96 gasch1_raffinose_vs_reference_pool_car_1 > -0.47 gasch1_29_deg_growth_ct_1 > 0.03 gasch2_DES460_Plus_0point02%_MMS___90_min > 0.703 -> class 6/13/0/0 "proteolytic degradation" Evaluation on training data (1638 items): ytypr108w 40,10,0,0 "RPN7" "subunit of the regulatory particle of the proteasome" 40,7,0,0 "RPN7" "subunit of the regulatory particle of the proteasome" 6,13,1,0 "RPN7" "subunit of the regulatory particle of the proteasome" ytyhr027c 40,10,0,0 "RPN1" "26S proteasome regulatory subunit" 40,7,0,0 "RPN1" "26S proteasome regulatory subunit" 6,13,1,0 "RPN1" "26S proteasome regulatory subunit" ytydr518w - 40,7,0,0 "EUG1" "protein disulfide isomerase" 6,1,0,0 "EUG1" "protein disulfide isomerase" ytydl007w 40,10,0,0 "RPT2" "26S proteasome regulatory subunit" 40,7,0,0 "RPT2" "26S proteasome regulatory subunit" 6,13,1,0 "RPT2" "26S proteasome regulatory subunit" ytyfr050c 40,10,0,0 "PRE4" "20S proteasome subunit(beta7)" 40,7,0,0 "PRE4" "20S proteasome subunit(beta7)" 6,13,1,0 "PRE4" "20S proteasome subunit(beta7)" ytyfr052w 11,1,0,0 "RPN12" "26S proteasome regulatory subunit" 3,3,1,0 "RPN12" "26S proteasome regulatory subunit" 40,10,0,0 "RPN12" "26S proteasome regulatory subunit" 40,7,0,0 "RPN12" "26S proteasome regulatory subunit" 6,13,1,0 "RPN12" "26S proteasome regulatory subunit" ytydr394w 40,10,0,0 "RPT3" "26S proteasome regulatory subunit" 40,7,0,0 "RPT3" "26S proteasome regulatory subunit" 6,13,1,0 "RPT3" "26S proteasome regulatory subunit" ytyer021w 40,10,0,0 "RPN3" "26S proteasome regulatory subunit" 40,7,0,0 "RPN3" "26S proteasome regulatory subunit" 6,13,1,0 "RPN3" "26S proteasome regulatory subunit" ytyor117w 40,10,0,0 "RPT5" "26S proteasome regulatory subunit" 40,7,0,0 "RPT5" "26S proteasome regulatory subunit" 6,13,1,0 "RPT5" "26S proteasome regulatory subunit" ytyjl001w 11,99,0,0 "PRE3" "20S proteasome subunit (beta1)" 14,4,3,5 "PRE3" "20S proteasome subunit (beta1)" 40,10,0,0 "PRE3" "20S proteasome subunit (beta1)" 40,7,0,0 "PRE3" "20S proteasome subunit (beta1)" 6,13,1,0 "PRE3" "20S proteasome subunit (beta1)" ytygr135w 40,10,0,0 "PRE9" "20S proteasome subunit Y13 (alpha3)" 40,7,0,0 "PRE9" "20S proteasome subunit Y13 (alpha3)" 6,13,1,0 "PRE9" "20S proteasome subunit Y13 (alpha3)" ytyfr004w 40,10,0,0 "RPN11" "26S proteasome regulatory subunit" 40,7,0,0 "RPN11" "26S proteasome regulatory subunit" 6,13,1,0 "RPN11" "26S proteasome regulatory subunit" ytyor157c 40,10,0,0 "PUP1" "20S proteasome subunit (beta2)" 40,7,0,0 "PUP1" "20S proteasome subunit (beta2)" 6,13,1,0 "PUP1" "20S proteasome subunit (beta2)" ytygr232w 40,10,0,0 "NAS6" "possible homolog of human 26S proteasome regulatory subunit p28" 40,7,0,0 "NAS6" "possible homolog of human 26S proteasome regulatory subunit p28" 6,13,1,0 "NAS6" "possible homolog of human 26S proteasome regulatory subunit p28" ytylr387c 6,13,0,0 "null" "similarity to YBR267w" ytyer012w 11,99,0,0 "PRE1" "20S proteasome subunit C11(beta4)" 14,4,3,5 "PRE1" "20S proteasome subunit C11(beta4)" 40,10,0,0 "PRE1" "20S proteasome subunit C11(beta4)" 40,7,0,0 "PRE1" "20S proteasome subunit C11(beta4)" 6,13,1,0 "PRE1" "20S proteasome subunit C11(beta4)" Training Accuracy: 15/16 (93.75%) Training Frequency class '6/13/0/0': 75/1638 (4.58%) Evaluation on validation data (851 items): ytypr103w 14,4,3,5 "PRE2" "20S proteasome subunit (beta5)" 3,3,1,0 "PRE2" "20S proteasome subunit (beta5)" 3,3,2,0 "PRE2" "20S proteasome subunit (beta5)" 40,10,0,0 "PRE2" "20S proteasome subunit (beta5)" 40,7,0,0 "PRE2" "20S proteasome subunit (beta5)" 6,13,1,0 "PRE2" "20S proteasome subunit (beta5)" ytydr353w - 1,2,1,0 "TRR1" "thioredoxin reductase (NADPH)" 1,3,7,0 "TRR1" "thioredoxin reductase (NADPH)" ytygr080w - 14,4,3,1 "TWF1" "twinfilin, an actin monomer sequestering protein" 40,3,0,0 "TWF1" "twinfilin, an actin monomer sequestering protein" 40,4,0,0 "TWF1" "twinfilin, an actin monomer sequestering protein" ytybl041w 40,10,0,0 "PRE7" "20S proteasome subunit(beta6)" 40,7,0,0 "PRE7" "20S proteasome subunit(beta6)" 6,13,1,0 "PRE7" "20S proteasome subunit(beta6)" ytydl126c 3,3,1,0 "CDC48" "microsomal protein of CDC48/PAS1/SEC18 family of ATPases" 6,13,1,0 "CDC48" "microsomal protein of CDC48/PAS1/SEC18 family of ATPases" ytydr092w 6,13,1,0 "UBC13" "E2 ubiquitin-conjugating enzyme" 6,7,0,0 "UBC13" "E2 ubiquitin-conjugating enzyme" Validation Accuracy: 4/6 (66.67%) Validation Frequency class '6/13/0/0': 34/851 (4.00%) Evaluation on propertest data (1292 items): ytygr048w 6,13,1,0 "UFD1" "ubiquitin fusion degradation protein" ytygl048c 3,3,1,0 "RPT6" "26S proteasome regulatory subunit" 40,10,0,0 "RPT6" "26S proteasome regulatory subunit" 40,7,0,0 "RPT6" "26S proteasome regulatory subunit" 6,13,1,0 "RPT6" "26S proteasome regulatory subunit" ytylr028c - 1,3,1,0 "ADE16" "5-aminoimidazole-4-carboxamide ribotide transformylase" ytyhr200w 40,10,0,0 "RPN10" "26S proteasome regulatory subunit" 40,7,0,0 "RPN10" "26S proteasome regulatory subunit" 6,13,1,0 "RPN10" "26S proteasome regulatory subunit" ytyml092c 40,10,0,0 "PRE8" "20S proteasome subunit Y7 (alpha2)" 40,7,0,0 "PRE8" "20S proteasome subunit Y7 (alpha2)" 6,13,1,0 "PRE8" "20S proteasome subunit Y7 (alpha2)" ytyer094c 40,10,0,0 "PUP3" "20S proteasome subunit (beta3)" 40,7,0,0 "PUP3" "20S proteasome subunit (beta3)" 6,13,1,0 "PUP3" "20S proteasome subunit (beta3)" ytykr014c - 6,4,0,0 "YPT52" "GTP-binding protein of the rab family" 8,13,0,0 "YPT52" "GTP-binding protein of the rab family" 8,19,0,0 "YPT52" "GTP-binding protein of the rab family" ytyer027c - 1,5,4,0 "GAL83" "glucose repression protein" 4,5,1,4 "GAL83" "glucose repression protein" ytydr264c - 13,11,3,7 "AKR1" "ankyrin repeat-containing protein" 14,4,3,3 "AKR1" "ankyrin repeat-containing protein" ytyhr018c - 1,1,1,0 "ARG4" "arginosuccinate lyase" 40,3,0,0 "ARG4" "arginosuccinate lyase" ytydr541c - 1,7,99,0 "null" "similarity to dihydroflavonol-4-reductases" ytydr480w - 14,1,0,0 "DIG2" "MAP kinase-associated protein, down-regulator of invasive growth and mating" 14,4,3,3 "DIG2" "MAP kinase-associated protein, down-regulator of invasive growth and mating" 40,10,0,0 "DIG2" "MAP kinase-associated protein, down-regulator of invasive growth and mating" Propertest Accuracy: 5/12 (41.67%) Propertest Frequency class '6/13/0/0': 51/1292 (3.95%) New (unknown) data (851 items): ytykl206c - 99,0,0,0 "null" "hypothetical protein" ytyml079w - 99,0,0,0 "null" "weak similarity to Synechocystis sp. hypothetical protein sll1188" ytyjr102c - 99,0,0,0 "VPS25" "weak similarity to hypothetical protein D. melanogaster" ytynr061c - 99,0,0,0 "null" "weak similarity to hypothetical protein YDL218w" ytyor193w - 99,0,0,0 "null" "weak similarity to YPL112c" ytygl242c - 99,0,0,0 "null" "weak similarity to Drosophila ANK protein" ytyor007c - 99,0,0,0 "SGT2" "similarity to protein phosphatases" ytygr277c - 99,0,0,0 "null" "similarity to hypothetical S.pombe protein" ------------------ Rule 901: church_sig_and_fc_heat <= 0 gasch1_aa_starv_4_h > 1.58 gasch1_Nitrogen_Depletion_4_h > 0.92 gasch2_DES459_mec1_Plus_heat_20_min > 0.344 -> class 1/1/0/0 "amino acid metabolism" Evaluation on training data (1638 items): ytylr142w 1,1,1,0 "PUT1" "proline oxidase" 1,1,10,0 "PUT1" "proline oxidase" 40,16,0,0 "PUT1" "proline oxidase" ytylr160c 1,1,10,0 "ASP3D" "L-asparaginase II" 40,1,0,0 "ASP3D" "L-asparaginase II" ytycl030c 1,1,1,0 "HIS4" "phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase/histidinol dehydrogenase" ytyer069w 1,1,1,0 "ARG5,6" "acetylglutamate kinase and acetylglutamyl-phosphate reductase" 40,16,0,0 "ARG5,6" "acetylglutamate kinase and acetylglutamyl-phosphate reductase" ytykl001c 1,1,1,0 "MET14" "ATP adenosine-5'-phosphosulfate 3'-phosphotransferase" 1,2,1,0 "MET14" "ATP adenosine-5'-phosphosulfate 3'-phosphotransferase" ytylr155c 1,1,10,0 "ASP3A" "L-asparaginase II" 40,1,0,0 "ASP3A" "L-asparaginase II" ytyjr010w 1,1,1,0 "MET3" "sulfate adenylyltransferase" 1,2,1,0 "MET3" "sulfate adenylyltransferase" ytydr253c 1,1,4,0 "MET32" "transcriptional regulator of sulfur amino acid metabolism" 1,2,4,0 "MET32" "transcriptional regulator of sulfur amino acid metabolism" 4,5,1,4 "MET32" "transcriptional regulator of sulfur amino acid metabolism" Training Accuracy: 8/8 (100.00%) Training Frequency class '1/1/0/0': 88/1638 (5.37%) Evaluation on validation data (851 items): ytyjr025c 1,1,10,0 "BNA1" "3-hydroxyanthranilic acid dioxygenase" 1,7,1,0 "BNA1" "3-hydroxyanthranilic acid dioxygenase" ytyil074c 1,1,1,11 "SER33" "3-phosphoglycerate dehydrogenase" ytyel071w - 2,99,0,0 "DLD3" "D-lactate dehydrogenase" 40,3,0,0 "DLD3" "D-lactate dehydrogenase" ytyer081w 1,1,1,0 "SER3" "3-phosphoglycerate dehydrogenase" Validation Accuracy: 3/4 (75.00%) Validation Frequency class '1/1/0/0': 46/851 (5.41%) Evaluation on propertest data (1292 items): ytyfr030w 1,1,1,0 "MET10" "sulfite reductase flavin-binding subunit" 1,2,1,0 "MET10" "sulfite reductase flavin-binding subunit" ytyhr018c 1,1,1,0 "ARG4" "arginosuccinate lyase" 40,3,0,0 "ARG4" "arginosuccinate lyase" ytynl220w - 1,3,1,0 "ADE12" "adenylosuccinate synthetase" 40,10,0,0 "ADE12" "adenylosuccinate synthetase" ytylr158c 1,1,10,0 "ASP3C" "L-asparaginase II" 40,1,0,0 "ASP3C" "L-asparaginase II" ytykl201c - 6,7,0,0 "MNN4" "regulates the mannosylphosphorylation" Propertest Accuracy: 3/5 (60.00%) Propertest Frequency class '1/1/0/0': 70/1292 (5.42%) New (unknown) data (851 items): ytyel072w - 99,0,0,0 "null" "hypothetical protein" ytybr147w - 99,0,0,0 "null" "strong similarity to hypothetical protein YOL092w" ytygl117w - 99,0,0,0 "null" "hypothetical protein" ytypl054w - 99,0,0,0 "LEE1" "similarity to S. pombe scp3/SPAC3A11.02 spindle poison sensitivity related protein" ytykl202w - 99,0,0,0 "null" "questionable ORF" ------------------ Rule 8: church_median_deviation_of_log_fc_gal <= 0.33 church_sig_and_fc_heat <= 0 church_below_threshold_in_all_conditions <= 0 gasch1_1M_sorbitol___60_min <= 0.19 gasch1_YP_fructose_vs_reference_pool_car_2 <= -0.67 gasch1_steady_state_29_dec_C_ct_2 > -0.33 gasch2_wt_plus_gamma_5_min <= 0.036 -> class 2/13/0/0 "respiration" Evaluation on training data (1638 items): ytykl141w 2,13,0,0 "SDH3" "cytochrome b560 subunit of respiratory complex II" 40,16,0,0 "SDH3" "cytochrome b560 subunit of respiratory complex II" ytylr295c 13,1,1,3 "ATP14" "F1F0-ATPase complex, subunit h" 2,13,0,0 "ATP14" "F1F0-ATPase complex, subunit h" 40,16,0,0 "ATP14" "F1F0-ATPase complex, subunit h" 67,50,22,0 "ATP14" "F1F0-ATPase complex, subunit h" 8,4,0,0 "ATP14" "F1F0-ATPase complex, subunit h" ytydl004w 13,1,1,3 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 2,13,0,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 40,16,0,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 67,50,22,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 8,4,0,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" ytyal039c - 1,7,4,0 "CYC3" "holocytochrome-c synthase (cytochrome c heme lyase)" 40,16,0,0 "CYC3" "holocytochrome-c synthase (cytochrome c heme lyase)" 6,7,99,0 "CYC3" "holocytochrome-c synthase (cytochrome c heme lyase)" ytymr256c 2,13,0,0 "COX7" "cytochrome-c oxidase, subunit VII" 40,16,0,0 "COX7" "cytochrome-c oxidase, subunit VII" 6,10,0,0 "COX7" "cytochrome-c oxidase, subunit VII" ytynl052w 2,13,0,0 "COX5A" "cytochrome-c oxidase chain V.A precursor" 40,16,0,0 "COX5A" "cytochrome-c oxidase chain V.A precursor" ytybr039w 13,1,1,3 "ATP3" "F1F0-ATPase complex, F1 gamma subunit" 2,13,0,0 "ATP3" "F1F0-ATPase complex, F1 gamma subunit" 40,16,0,0 "ATP3" "F1F0-ATPase complex, F1 gamma subunit" 67,50,22,0 "ATP3" "F1F0-ATPase complex, F1 gamma subunit" 8,4,0,0 "ATP3" "F1F0-ATPase complex, F1 gamma subunit" ytykl016c 13,1,1,3 "ATP7" "F1F0-ATPase complex, FO D subunit" 2,13,0,0 "ATP7" "F1F0-ATPase complex, FO D subunit" 40,16,0,0 "ATP7" "F1F0-ATPase complex, FO D subunit" 67,50,22,0 "ATP7" "F1F0-ATPase complex, FO D subunit" 8,4,0,0 "ATP7" "F1F0-ATPase complex, FO D subunit" ytydl067c 2,13,0,0 "COX9" "cytochrome-c oxidase chain VIIA" 40,16,0,0 "COX9" "cytochrome-c oxidase chain VIIA" 6,10,0,0 "COX9" "cytochrome-c oxidase chain VIIA" ytyel024w 2,13,0,0 "RIP1" "ubiquinol--cytochrome-c reductase iron-sulfur protein precursor" 40,16,0,0 "RIP1" "ubiquinol--cytochrome-c reductase iron-sulfur protein precursor" ytymr145c 2,13,0,0 "NDH1" "mitochondrial cytosolically directed NADH dehydrogenase" 40,16,0,0 "NDH1" "mitochondrial cytosolically directed NADH dehydrogenase" ytyjr121w 13,1,1,3 "ATP2" "F1F0-ATPase complex, F1 beta subunit" 2,13,0,0 "ATP2" "F1F0-ATPase complex, F1 beta subunit" 40,16,0,0 "ATP2" "F1F0-ATPase complex, F1 beta subunit" 67,50,22,0 "ATP2" "F1F0-ATPase complex, F1 beta subunit" 8,4,0,0 "ATP2" "F1F0-ATPase complex, F1 beta subunit" ytydr529c 2,13,0,0 "QCR7" "ubiquinol--cytochrome-c reductase subunit 7" 40,16,0,0 "QCR7" "ubiquinol--cytochrome-c reductase subunit 7" 6,10,0,0 "QCR7" "ubiquinol--cytochrome-c reductase subunit 7" ytyjr048w 2,13,0,0 "CYC1" "cytochrome-c isoform 1" 40,16,0,0 "CYC1" "cytochrome-c isoform 1" ytygl191w 2,13,0,0 "COX13" "cytochrome-c oxidase chain VIa" 40,16,0,0 "COX13" "cytochrome-c oxidase chain VIa" ytypl271w 13,1,1,3 "ATP15" "F1F0-ATPase complex, F1 epsilon subunit" 2,13,0,0 "ATP15" "F1F0-ATPase complex, F1 epsilon subunit" 40,16,0,0 "ATP15" "F1F0-ATPase complex, F1 epsilon subunit" 67,50,22,0 "ATP15" "F1F0-ATPase complex, F1 epsilon subunit" 8,4,0,0 "ATP15" "F1F0-ATPase complex, F1 epsilon subunit" Training Accuracy: 15/16 (93.75%) Training Frequency class '2/13/0/0': 33/1638 (2.01%) Evaluation on validation data (851 items): ytyel059c-a - 30,16,0,0 "SOM1" "required for mitochondrial IMP1 peptidase function" 40,16,0,0 "SOM1" "required for mitochondrial IMP1 peptidase function" 6,4,0,0 "SOM1" "required for mitochondrial IMP1 peptidase function" 8,4,0,0 "SOM1" "required for mitochondrial IMP1 peptidase function" ytypl078c 13,1,1,3 "ATP4" "F1F0-ATPase complex, F0 subunit B" 2,13,0,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" 40,16,0,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" 67,50,22,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" 8,4,0,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" ytyjr077c - 1,4,7,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 13,1,3,3 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 40,16,0,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 67,4,7,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 8,4,0,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" ytypr191w 2,13,0,0 "QCR2" "ubiquinol--cytochrome-c reductase 40KD chain II" 40,16,0,0 "QCR2" "ubiquinol--cytochrome-c reductase 40KD chain II" 6,10,0,0 "QCR2" "ubiquinol--cytochrome-c reductase 40KD chain II" Validation Accuracy: 2/4 (50.00%) Validation Frequency class '2/13/0/0': 16/851 (1.88%) Evaluation on propertest data (1292 items): ytydl174c - 1,5,1,0 "DLD1" "D-lactate ferricytochrome C oxidoreductase (D-LCR)" 2,16,0,0 "DLD1" "D-lactate ferricytochrome C oxidoreductase (D-LCR)" 40,16,0,0 "DLD1" "D-lactate ferricytochrome C oxidoreductase (D-LCR)" ytylr439w - 40,16,0,0 "MRPL4" "ribosomal protein, mitochondrial" 5,1,0,0 "MRPL4" "ribosomal protein, mitochondrial" ytylr395c 2,13,0,0 "COX8" "cytochrome-c oxidase chain VIII" 40,16,0,0 "COX8" "cytochrome-c oxidase chain VIII" ytydr298c 13,1,1,3 "ATP5" "F1F0-ATPase complex, OSCP subunit" 2,13,0,0 "ATP5" "F1F0-ATPase complex, OSCP subunit" 40,16,0,0 "ATP5" "F1F0-ATPase complex, OSCP subunit" 67,50,22,0 "ATP5" "F1F0-ATPase complex, OSCP subunit" 8,4,0,0 "ATP5" "F1F0-ATPase complex, OSCP subunit" ytyhr001w-a 2,13,0,0 "QCR10" "ubiquinol--cytochrome-c reductase 8.5 kDa subunit" 40,16,0,0 "QCR10" "ubiquinol--cytochrome-c reductase 8.5 kDa subunit" ytypl262w - 2,10,0,0 "FUM1" "fumarate hydratase" 40,16,0,0 "FUM1" "fumarate hydratase" 40,3,0,0 "FUM1" "fumarate hydratase" ytybl099w 13,1,1,3 "ATP1" "F1F0-ATPase complex, F1 alpha subunit" 2,13,0,0 "ATP1" "F1F0-ATPase complex, F1 alpha subunit" 40,16,0,0 "ATP1" "F1F0-ATPase complex, F1 alpha subunit" 67,50,22,0 "ATP1" "F1F0-ATPase complex, F1 alpha subunit" 8,4,0,0 "ATP1" "F1F0-ATPase complex, F1 alpha subunit" ytylr038c 2,13,0,0 "COX12" "cytochrome-c oxidase, subunit VIB" 40,16,0,0 "COX12" "cytochrome-c oxidase, subunit VIB" 6,10,0,0 "COX12" "cytochrome-c oxidase, subunit VIB" ytyhr051w 2,13,0,0 "COX6" "cytochrome-c oxidase subunit VI" 40,16,0,0 "COX6" "cytochrome-c oxidase subunit VI" ytyjl063c - 40,16,0,0 "MRPL8" "ribosomal protein L17, mitochondrial" 5,1,0,0 "MRPL8" "ribosomal protein L17, mitochondrial" ytybl045c 2,13,0,0 "COR1" "ubiquinol--cytochrome-c reductase 44K core protein" 40,16,0,0 "COR1" "ubiquinol--cytochrome-c reductase 44K core protein" ytyhr096c - 1,5,7,0 "HXT5" "member of the hexose transporter family" 40,2,0,0 "HXT5" "member of the hexose transporter family" 67,7,0,0 "HXT5" "member of the hexose transporter family" 8,19,0,0 "HXT5" "member of the hexose transporter family" Propertest Accuracy: 7/12 (58.33%) Propertest Frequency class '2/13/0/0': 28/1292 (2.17%) New (unknown) data (851 items): ytybr004c - 99,0,0,0 "null" "similarity to S.pombe hypothetical protein SPAC18B11.05" ytynl278w - 99,0,0,0 "CAF120" "similarity to YLR187w" ytyjr080c - 99,0,0,0 "null" "hypothetical protein" ytymr136w - 99,0,0,0 "GAT2" "weak similarity to YIR013c and YLR013w" ytyil050w - 98,0,0,0 "PCL7" "cyclin like protein interacting with PHO85P" ------------------ Rule 941: cellcycle_cdc15_170 > -0.03 gasch1_Heat_Shock_000_minutes__hs_2 > 0.97 gasch1_constant_0point32_mM_H2O2_120_min_redo > -0.56 gasch1_YPD_stationary_phase_12_h_ypd_1 <= -1.51 gasch1_DBYmsn2/4_real_strain_Plus_0point32_mM_H2O2_20_min > -1.09 gasch1_Msn2_overexpression_repeat > -0.046 gasch2_wt_plus_gamma_30_min <= -0.228 -> class 5/1/0/0 "ribosome biogenesis" Evaluation on training data (1638 items): ytyer131w 40,3,0,0 "RPS26B" "40S small subunit ribosomal protein S26e-c5" 5,1,0,0 "RPS26B" "40S small subunit ribosomal protein S26e-c5" ytyer117w 40,3,0,0 "RPL23B" "ribosomal protein L23.e" 5,1,0,0 "RPL23B" "ribosomal protein L23.e" ytyil052c 40,3,0,0 "RPL34B" "ribosomal protein L34.e" 5,1,0,0 "RPL34B" "ribosomal protein L34.e" ytyhr021c 40,3,0,0 "RPS27B" "ribosomal protein S27.e" 5,1,0,0 "RPS27B" "ribosomal protein S27.e" ytyor182c 40,3,0,0 "RPS30B" "ribosomal protein S30" 5,1,0,0 "RPS30B" "ribosomal protein S30" ytygr148c 40,3,0,0 "RPL24B" "60S large subunit ribosomal protein L24.e.B" 5,1,0,0 "RPL24B" "60S large subunit ribosomal protein L24.e.B" ytydr450w 40,3,0,0 "RPS18A" "ribosomal protein S18.e.c4" 5,1,0,0 "RPS18A" "ribosomal protein S18.e.c4" ytylr029c 40,3,0,0 "RPL15A" "60s large subunit ribosomal protein L15.e.c12" 5,1,0,0 "RPL15A" "60s large subunit ribosomal protein L15.e.c12" ytygl147c 40,3,0,0 "RPL9A" "ribosomal protein L9.e" 5,1,0,0 "RPL9A" "ribosomal protein L9.e" ytybr189w 40,3,0,0 "RPS9B" "ribosomal protein S9.e.B" 5,1,0,0 "RPS9B" "ribosomal protein S9.e.B" ytykl180w 40,3,0,0 "RPL17A" "ribosomal protein L17.e" 5,1,0,0 "RPL17A" "ribosomal protein L17.e" ytylr061w 5,1,0,0 "RPL22A" "ribosomal protein" ytybr084c-a 40,3,0,0 "RPL19A" "60S large subunit ribosomal protein L19.e" 5,1,0,0 "RPL19A" "60S large subunit ribosomal protein L19.e" ytyhr141c 40,3,0,0 "RPL42B" "ribosomal protein L36a.e" 5,1,0,0 "RPL42B" "ribosomal protein L36a.e" ytyer056c-a 40,3,0,0 "RPL34A" "ribosomal protein L34" 5,1,0,0 "RPL34A" "ribosomal protein L34" ytydr064w 40,3,0,0 "RPS13" "ribosomal protein" 5,1,0,0 "RPS13" "ribosomal protein" ytylr167w 40,3,0,0 "RPS31" "ubiquitin/40S small subunit ribosomal protein" 5,1,0,0 "RPS31" "ubiquitin/40S small subunit ribosomal protein" 6,13,1,0 "RPS31" "ubiquitin/40S small subunit ribosomal protein" ytygl030w 40,3,0,0 "RPL30" "60S large subunit ribosomal protein L30.e" 5,1,0,0 "RPL30" "60S large subunit ribosomal protein L30.e" ytylr344w 40,3,0,0 "RPL26A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL26A" "60S large subunit ribosomal protein" ytydr500c 40,3,0,0 "RPL37B" "ribosomal protein L.37.e" 5,1,0,0 "RPL37B" "ribosomal protein L.37.e" ytyor312c 40,3,0,0 "RPL20B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL20B" "60S large subunit ribosomal protein" ytynl178w 40,3,0,0 "RPS3" "ribosomal protein S3.e" 5,1,0,0 "RPS3" "ribosomal protein S3.e" ytyhr010w 40,3,0,0 "RPL27A" "60S large subunit ribosomal protein L27.e" 5,1,0,0 "RPL27A" "60S large subunit ribosomal protein L27.e" ytyor234c 5,1,0,0 "RPL33B" "ribosomal protein L35a.e.c15" ytykr057w 40,3,0,0 "RPS21A" "ribosomal protein S21.e" 5,1,0,0 "RPS21A" "ribosomal protein S21.e" ytyjl177w 40,3,0,0 "RPL17B" "60s large subunit ribosomal protein L17.e" 5,1,0,0 "RPL17B" "60s large subunit ribosomal protein L17.e" ytybr191w 40,3,0,0 "RPL21A" "ribosomal protein L21.e" 5,1,0,0 "RPL21A" "ribosomal protein L21.e" ytylr448w 40,3,0,0 "RPL6B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL6B" "60S large subunit ribosomal protein" ytypr132w 40,3,0,0 "RPS23B" "40S small subunit ribosomal protein S23.e" 5,1,0,0 "RPS23B" "40S small subunit ribosomal protein S23.e" ytyhl015w 40,3,0,0 "RPS20" "ribosomal protein" 5,1,0,0 "RPS20" "ribosomal protein" ytypl131w 40,3,0,0 "RPL5" "60S large subunit ribosomal protein L5.e" 5,1,0,0 "RPL5" "60S large subunit ribosomal protein L5.e" ytyil148w 40,3,0,0 "RPL40A" "ubiquitin" 5,1,0,0 "RPL40A" "ubiquitin" 6,13,1,0 "RPL40A" "ubiquitin" ytydr447c 40,3,0,0 "RPS17B" "ribosomal protein S17.e.B" 5,1,0,0 "RPS17B" "ribosomal protein S17.e.B" ytygl076c 40,3,0,0 "RPL7A" "60S large subunit ribosomal protein L7.e.A" 5,1,0,0 "RPL7A" "60S large subunit ribosomal protein L7.e.A" ytynl067w 40,3,0,0 "RPL9B" "ribosomal protein L9.e.c14" 5,1,0,0 "RPL9B" "ribosomal protein L9.e.c14" ytyol120c 40,3,0,0 "RPL18A" "60S large subunit ribosomal protein S18.e" 5,1,0,0 "RPL18A" "60S large subunit ribosomal protein S18.e" ytyil018w 40,3,0,0 "RPL2B" "60S large subunit ribosomal protein L8.e" 5,1,0,0 "RPL2B" "60S large subunit ribosomal protein L8.e" ytyfr031c-a 5,1,0,0 "RPL2A" "ribosomal protein L8.e" Training Accuracy: 38/38 (100.00%) Training Frequency class '5/1/0/0': 90/1638 (5.49%) Evaluation on validation data (851 items): ytydr012w 40,3,0,0 "RPL4B" "ribosomal protein L4.e.B" 5,1,0,0 "RPL4B" "ribosomal protein L4.e.B" ytyol149w - 4,5,5,0 "DCP1" "mRNA decapping enzyme" ytyjl189w 40,3,0,0 "RPL39" "60S large subunit ribosomal protein L39.e" 5,1,0,0 "RPL39" "60S large subunit ribosomal protein L39.e" ytyhr203c 40,3,0,0 "RPS4B" "ribosomal protein S4.e.c8" 5,1,0,0 "RPS4B" "ribosomal protein S4.e.c8" ytyhl033c 40,3,0,0 "RPL8A" "60S large subunit ribosomal protein L7a.e.A" 5,1,0,0 "RPL8A" "60S large subunit ribosomal protein L7a.e.A" ytylr388w 40,3,0,0 "RPS29A" "ribosomal protein S29.e.A" 5,1,0,0 "RPS29A" "ribosomal protein S29.e.A" ytyjr145c 40,3,0,0 "RPS4A" "ribosomal protein S4.e.c10" 5,1,0,0 "RPS4A" "ribosomal protein S4.e.c10" ytylr075w 3,3,1,0 "RPL10" "60S large subunit ribosomal protein" 40,3,0,0 "RPL10" "60S large subunit ribosomal protein" 5,1,0,0 "RPL10" "60S large subunit ribosomal protein" 6,10,0,0 "RPL10" "60S large subunit ribosomal protein" ytynl162w 40,3,0,0 "RPL42A" "ribosomal protein L36a.e" 5,1,0,0 "RPL42A" "ribosomal protein L36a.e" ytybr143c - 40,3,0,0 "SUP45" "translational release factor" 5,4,0,0 "SUP45" "translational release factor" ytylr325c 40,3,0,0 "RPL38" "60S large subunit ribosomal protein" 5,1,0,0 "RPL38" "60S large subunit ribosomal protein" ytyol121c 40,3,0,0 "RPS19A" "40S small subunit ribosomal protein S19.e" 5,1,0,0 "RPS19A" "40S small subunit ribosomal protein S19.e" ytyer102w 40,3,0,0 "RPS8B" "ribosomal protein S8.e" 5,1,0,0 "RPS8B" "ribosomal protein S8.e" ytylr333c 40,3,0,0 "RPS25B" "ribosomal protein S25.e.c12" 5,1,0,0 "RPS25B" "ribosomal protein S25.e.c12" ytydl136w 40,3,0,0 "RPL35B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL35B" "60S large subunit ribosomal protein" ytygl103w 40,3,0,0 "RPL28" "60S large subunit ribosomal protein L27a.e" 5,1,0,0 "RPL28" "60S large subunit ribosomal protein L27a.e" ytypr102c 40,3,0,0 "RPL11A" "ribosomal protein L11.e" 5,1,0,0 "RPL11A" "ribosomal protein L11.e" ytylr441c 14,4,3,3 "RPS1A" "ribosomal protein S3a.e" 40,3,0,0 "RPS1A" "ribosomal protein S3a.e" 5,1,0,0 "RPS1A" "ribosomal protein S3a.e" Validation Accuracy: 16/18 (88.89%) Validation Frequency class '5/1/0/0': 42/851 (4.94%) Evaluation on propertest data (1292 items): ytygl123w 40,3,0,0 "RPS2" "40S small subunit ribosomal protein" 5,1,0,0 "RPS2" "40S small subunit ribosomal protein" ytyml073c 40,3,0,0 "RPL6A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL6A" "60S large subunit ribosomal protein" ytypr043w 40,3,0,0 "RPL43A" "ribosomal protein L37a.e" 5,1,0,0 "RPL43A" "ribosomal protein L37a.e" ytygl225w - 40,8,0,0 "GOG5" "GDP-mannose transporter into the lumen of the Golgi" 67,7,0,0 "GOG5" "GDP-mannose transporter into the lumen of the Golgi" 8,7,0,0 "GOG5" "GDP-mannose transporter into the lumen of the Golgi" ytygr085c 40,3,0,0 "RPL11B" "ribosomal protein" 5,1,0,0 "RPL11B" "ribosomal protein" ytyll045c 40,3,0,0 "RPL8B" "60s large subunit ribosomal protein L7a.e.B" 5,1,0,0 "RPL8B" "60s large subunit ribosomal protein L7a.e.B" ytypl143w 40,3,0,0 "RPL33A" "ribosomal protein L35a.e.c16" 5,1,0,0 "RPL33A" "ribosomal protein L35a.e.c16" ytydr471w 40,3,0,0 "RPL27B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL27B" "60S large subunit ribosomal protein" ytyjl136c 40,3,0,0 "RPS21B" "40S small subunit ribosomal protein S21.e" 5,1,0,0 "RPS21B" "40S small subunit ribosomal protein S21.e" ytyjl138c - 40,3,0,0 "TIF2" "translation initiation factor eIF4A" 5,4,0,0 "TIF2" "translation initiation factor eIF4A" ytygl031c 40,3,0,0 "RPL24A" "60S large subunit ribosomal protein L24.e.A" 5,1,0,0 "RPL24A" "60S large subunit ribosomal protein L24.e.A" ytygr034w 40,3,0,0 "RPL26B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL26B" "60S large subunit ribosomal protein" ytynl255c 4,99,0,0 "GIS2" "strong similarity to nucleic acid-binding proteins, similarity to Tetrahymena thermophila cnjB protein" 5,1,0,0 "GIS2" "strong similarity to nucleic acid-binding proteins, similarity to Tetrahymena thermophila cnjB protein" ytybl072c 40,3,0,0 "RPS8A" "ribosomal protein S8.e" 5,1,0,0 "RPS8A" "ribosomal protein S8.e" ytygr118w 40,3,0,0 "RPS23A" "40S small subunit ribosomal protein S23.e" 5,1,0,0 "RPS23A" "40S small subunit ribosomal protein S23.e" ytyml063w 40,3,0,0 "RPS1B" "ribosomal protein S3a.e" 5,1,0,0 "RPS1B" "ribosomal protein S3a.e" ytymr242c 40,3,0,0 "RPL20A" "60s large subunit ribosomal protein" 5,1,0,0 "RPL20A" "60s large subunit ribosomal protein" ytynl209w - 40,3,0,0 "SSB2" "heat shock protein of HSP70 family, cytosolic" 5,99,0,0 "SSB2" "heat shock protein of HSP70 family, cytosolic" ytybl027w 40,3,0,0 "RPL19B" "60S large subunit ribosomal protein L19.e" 5,1,0,0 "RPL19B" "60S large subunit ribosomal protein L19.e" ytygr027c 40,3,0,0 "RPS25A" "ribosomal protein S25.e.c7" 5,1,0,0 "RPS25A" "ribosomal protein S25.e.c7" ytyol127w 40,3,0,0 "RPL25" "ribosomal protein L23a.e" 5,1,0,0 "RPL25" "ribosomal protein L23a.e" Propertest Accuracy: 18/21 (85.71%) Propertest Frequency class '5/1/0/0': 78/1292 (6.04%) New (unknown) data (851 items): ytydr417c - 99,0,0,0 "null" "questionable ORF" ytylr062c - 99,0,0,0 "BUD28" "questionable ORF" ytygl102c - 99,0,0,0 "null" "questionable ORF" ytynl010w - 99,0,0,0 "null" "weak similarity to B.subtilis hypothetical protein ykrX" ytydr339c - 99,0,0,0 "null" "weak similarity to hypothetical protein YOR004w" ------------------ Rule 67: gasch1_1point5_mM_diamide_30_min > -1.79 gasch1_Nitrogen_Depletion_8_h <= -0.92 gasch1_YPD_stationary_phase_1_d_ypd_1 <= -1.51 gasch1_17_deg_growth_ct_1 <= 0.65 gasch2_DES459_mec1_Plus_heat_20_min <= -1.776 -> class 5/1/0/0 "ribosome biogenesis" Evaluation on training data (1638 items): ytyer117w 40,3,0,0 "RPL23B" "ribosomal protein L23.e" 5,1,0,0 "RPL23B" "ribosomal protein L23.e" ytyil052c 40,3,0,0 "RPL34B" "ribosomal protein L34.e" 5,1,0,0 "RPL34B" "ribosomal protein L34.e" ytyil133c 40,3,0,0 "RPL16A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL16A" "60S large subunit ribosomal protein" ytybl087c 40,3,0,0 "RPL23A" "60S large subunit ribosomal protein L23.e" 5,1,0,0 "RPL23A" "60S large subunit ribosomal protein L23.e" ytydl191w 40,3,0,0 "RPL35A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL35A" "60S large subunit ribosomal protein" ytygr148c 40,3,0,0 "RPL24B" "60S large subunit ribosomal protein L24.e.B" 5,1,0,0 "RPL24B" "60S large subunit ribosomal protein L24.e.B" ytylr029c 40,3,0,0 "RPL15A" "60s large subunit ribosomal protein L15.e.c12" 5,1,0,0 "RPL15A" "60s large subunit ribosomal protein L15.e.c12" ytygl147c 40,3,0,0 "RPL9A" "ribosomal protein L9.e" 5,1,0,0 "RPL9A" "ribosomal protein L9.e" ytybr189w 40,3,0,0 "RPS9B" "ribosomal protein S9.e.B" 5,1,0,0 "RPS9B" "ribosomal protein S9.e.B" ytydr025w 40,3,0,0 "RPS11A" "ribosomal protein S11.e" 5,1,0,0 "RPS11A" "ribosomal protein S11.e" ytybr031w 40,3,0,0 "RPL4A" "ribosomal protein" 5,1,0,0 "RPL4A" "ribosomal protein" ytykl180w 40,3,0,0 "RPL17A" "ribosomal protein L17.e" 5,1,0,0 "RPL17A" "ribosomal protein L17.e" ytylr061w 5,1,0,0 "RPL22A" "ribosomal protein" ytylr048w 40,3,0,0 "RPS0B" "40S ribosomal protein p40 homolog B" 5,1,0,0 "RPS0B" "40S ribosomal protein p40 homolog B" 6,10,0,0 "RPS0B" "40S ribosomal protein p40 homolog B" ytybr084c-a 40,3,0,0 "RPL19A" "60S large subunit ribosomal protein L19.e" 5,1,0,0 "RPL19A" "60S large subunit ribosomal protein L19.e" ytyhr141c 40,3,0,0 "RPL42B" "ribosomal protein L36a.e" 5,1,0,0 "RPL42B" "ribosomal protein L36a.e" ytyer056c-a 40,3,0,0 "RPL34A" "ribosomal protein L34" 5,1,0,0 "RPL34A" "ribosomal protein L34" ytyor369c 40,3,0,0 "RPS12" "40S small subunit acidic ribosomal protein S12" 5,1,0,0 "RPS12" "40S small subunit acidic ribosomal protein S12" ytydl061c 40,3,0,0 "RPS29B" "ribosomal protein S29.e.B" 5,1,0,0 "RPS29B" "ribosomal protein S29.e.B" ytygr285c - 40,10,3,0 "ZUO1" "zuotin, a putative Z-DNA binding protein" ytyml026c 40,3,0,0 "RPS18B" "ribosomal protein S18.e.c13" 5,1,0,0 "RPS18B" "ribosomal protein S18.e.c13" ytylr406c 40,3,0,0 "RPL31B" "60S large subunit ribosomal protein L31.e.c12" 5,1,0,0 "RPL31B" "60S large subunit ribosomal protein L31.e.c12" ytylr340w 40,3,0,0 "RPP0" "acidic ribosomal protein L10.e" 5,1,0,0 "RPP0" "acidic ribosomal protein L10.e" ytygl030w 40,3,0,0 "RPL30" "60S large subunit ribosomal protein L30.e" 5,1,0,0 "RPL30" "60S large subunit ribosomal protein L30.e" ytylr344w 40,3,0,0 "RPL26A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL26A" "60S large subunit ribosomal protein" ytydl082w 40,3,0,0 "RPL13A" "60S large subunit ribosomal protein L13" 5,1,0,0 "RPL13A" "60S large subunit ribosomal protein L13" ytyor312c 40,3,0,0 "RPL20B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL20B" "60S large subunit ribosomal protein" ytynl178w 40,3,0,0 "RPS3" "ribosomal protein S3.e" 5,1,0,0 "RPS3" "ribosomal protein S3.e" ytyhr010w 40,3,0,0 "RPL27A" "60S large subunit ribosomal protein L27.e" 5,1,0,0 "RPL27A" "60S large subunit ribosomal protein L27.e" ytygr214w 14,4,3,1 "RPS0A" "40S ribosomal protein p40 homolog A" 40,3,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" 5,1,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" 6,10,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" ytyjl177w 40,3,0,0 "RPL17B" "60s large subunit ribosomal protein L17.e" 5,1,0,0 "RPL17B" "60s large subunit ribosomal protein L17.e" ytykl056c 40,3,0,0 "null" "strong similarity to human IgE-dependent histamine-releasing factor" 5,1,0,0 "null" "strong similarity to human IgE-dependent histamine-releasing factor" ytybl092w 40,3,0,0 "RPL32" "60S large subunit ribosomal protein L32.e" 5,1,0,0 "RPL32" "60S large subunit ribosomal protein L32.e" ytylr448w 40,3,0,0 "RPL6B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL6B" "60S large subunit ribosomal protein" ytypr132w 40,3,0,0 "RPS23B" "40S small subunit ribosomal protein S23.e" 5,1,0,0 "RPS23B" "40S small subunit ribosomal protein S23.e" ytypl131w 40,3,0,0 "RPL5" "60S large subunit ribosomal protein L5.e" 5,1,0,0 "RPL5" "60S large subunit ribosomal protein L5.e" ytyjr123w 40,3,0,0 "RPS5" "ribosomal protein S5.e" 5,1,0,0 "RPS5" "ribosomal protein S5.e" ytydr447c 40,3,0,0 "RPS17B" "ribosomal protein S17.e.B" 5,1,0,0 "RPS17B" "ribosomal protein S17.e.B" ytygl076c 40,3,0,0 "RPL7A" "60S large subunit ribosomal protein L7.e.A" 5,1,0,0 "RPL7A" "60S large subunit ribosomal protein L7.e.A" ytyor293w 40,3,0,0 "RPS10A" "ribosomal protein S10.e" 5,1,0,0 "RPS10A" "ribosomal protein S10.e" ytykl006w 40,3,0,0 "RPL14A" "ribosomal protein" 5,1,0,0 "RPL14A" "ribosomal protein" ytynl067w 40,3,0,0 "RPL9B" "ribosomal protein L9.e.c14" 5,1,0,0 "RPL9B" "ribosomal protein L9.e.c14" ytymr116c 2,16,0,0 "ASC1" "40S small subunit ribosomal protein" 40,3,0,0 "ASC1" "40S small subunit ribosomal protein" 5,1,0,0 "ASC1" "40S small subunit ribosomal protein" 5,4,0,0 "ASC1" "40S small subunit ribosomal protein" ytyil018w 40,3,0,0 "RPL2B" "60S large subunit ribosomal protein L8.e" 5,1,0,0 "RPL2B" "60S large subunit ribosomal protein L8.e" ytyfr031c-a 5,1,0,0 "RPL2A" "ribosomal protein L8.e" ytydl075w 40,3,0,0 "RPL31A" "60S large subunit ribosomal protein L31.e" 5,1,0,0 "RPL31A" "60S large subunit ribosomal protein L31.e" Training Accuracy: 45/46 (97.83%) Training Frequency class '5/1/0/0': 90/1638 (5.49%) Evaluation on validation data (851 items): ytyjl189w 40,3,0,0 "RPL39" "60S large subunit ribosomal protein L39.e" 5,1,0,0 "RPL39" "60S large subunit ribosomal protein L39.e" ytyor096w 40,3,0,0 "RPS7A" "ribosomal protein" 5,1,0,0 "RPS7A" "ribosomal protein" ytyhr203c 40,3,0,0 "RPS4B" "ribosomal protein S4.e.c8" 5,1,0,0 "RPS4B" "ribosomal protein S4.e.c8" ytyhl033c 40,3,0,0 "RPL8A" "60S large subunit ribosomal protein L7a.e.A" 5,1,0,0 "RPL8A" "60S large subunit ribosomal protein L7a.e.A" ytylr388w 40,3,0,0 "RPS29A" "ribosomal protein S29.e.A" 5,1,0,0 "RPS29A" "ribosomal protein S29.e.A" ytyjr145c 40,3,0,0 "RPS4A" "ribosomal protein S4.e.c10" 5,1,0,0 "RPS4A" "ribosomal protein S4.e.c10" ytynl162w 40,3,0,0 "RPL42A" "ribosomal protein L36a.e" 5,1,0,0 "RPL42A" "ribosomal protein L36a.e" ytylr325c 40,3,0,0 "RPL38" "60S large subunit ribosomal protein" 5,1,0,0 "RPL38" "60S large subunit ribosomal protein" ytyol121c 40,3,0,0 "RPS19A" "40S small subunit ribosomal protein S19.e" 5,1,0,0 "RPS19A" "40S small subunit ribosomal protein S19.e" ytyer102w 40,3,0,0 "RPS8B" "ribosomal protein S8.e" 5,1,0,0 "RPS8B" "ribosomal protein S8.e" ytylr333c 40,3,0,0 "RPS25B" "ribosomal protein S25.e.c12" 5,1,0,0 "RPS25B" "ribosomal protein S25.e.c12" ytydl136w 40,3,0,0 "RPL35B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL35B" "60S large subunit ribosomal protein" ytygl103w 40,3,0,0 "RPL28" "60S large subunit ribosomal protein L27a.e" 5,1,0,0 "RPL28" "60S large subunit ribosomal protein L27a.e" ytynl096c 40,3,0,0 "RPS7B" "strong similarity to ribosomal protein S7" 5,1,0,0 "RPS7B" "strong similarity to ribosomal protein S7" ytypr102c 40,3,0,0 "RPL11A" "ribosomal protein L11.e" 5,1,0,0 "RPL11A" "ribosomal protein L11.e" ytylr441c 14,4,3,3 "RPS1A" "ribosomal protein S3a.e" 40,3,0,0 "RPS1A" "ribosomal protein S3a.e" 5,1,0,0 "RPS1A" "ribosomal protein S3a.e" Validation Accuracy: 16/16 (100.00%) Validation Frequency class '5/1/0/0': 42/851 (4.94%) Evaluation on propertest data (1292 items): ytygl123w 40,3,0,0 "RPS2" "40S small subunit ribosomal protein" 5,1,0,0 "RPS2" "40S small subunit ribosomal protein" ytypl198w 40,3,0,0 "RPL7B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL7B" "60S large subunit ribosomal protein" ytyml073c 40,3,0,0 "RPL6A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL6A" "60S large subunit ribosomal protein" ytydr418w 40,3,0,0 "RPL12B" "60S large subunit ribosomal protein L12.e" 5,1,0,0 "RPL12B" "60S large subunit ribosomal protein L12.e" ytypr043w 40,3,0,0 "RPL43A" "ribosomal protein L37a.e" 5,1,0,0 "RPL43A" "ribosomal protein L37a.e" ytyor167c 40,3,0,0 "RPS28A" "40S small subunit ribosomal protein S28.e.c15" 5,1,0,0 "RPS28A" "40S small subunit ribosomal protein S28.e.c15" ytyer074w 40,3,0,0 "RPS24A" "40s small subunit ribosomal protein S24.e" 5,1,0,0 "RPS24A" "40s small subunit ribosomal protein S24.e" ytygr085c 40,3,0,0 "RPL11B" "ribosomal protein" 5,1,0,0 "RPL11B" "ribosomal protein" ytypl220w 40,3,0,0 "RPL1A" "ribosomal protein" 5,1,0,0 "RPL1A" "ribosomal protein" ytyll045c 40,3,0,0 "RPL8B" "60s large subunit ribosomal protein L7a.e.B" 5,1,0,0 "RPL8B" "60s large subunit ribosomal protein L7a.e.B" ytynl119w 5,1,0,0 "null" "weak similarity to M.jannaschii hypothetical protein MJ1257" ytypl143w 40,3,0,0 "RPL33A" "ribosomal protein L35a.e.c16" 5,1,0,0 "RPL33A" "ribosomal protein L35a.e.c16" ytydr471w 40,3,0,0 "RPL27B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL27B" "60S large subunit ribosomal protein" ytypr163c - 40,3,0,0 "TIF3" "translation initiation factor eIF4B" 5,4,0,0 "TIF3" "translation initiation factor eIF4B" ytyjl136c 40,3,0,0 "RPS21B" "40S small subunit ribosomal protein S21.e" 5,1,0,0 "RPS21B" "40S small subunit ribosomal protein S21.e" ytyml024w 40,3,0,0 "RPS17A" "ribosomal protein S17.e.A" 5,1,0,0 "RPS17A" "ribosomal protein S17.e.A" ytygl031c 40,3,0,0 "RPL24A" "60S large subunit ribosomal protein L24.e.A" 5,1,0,0 "RPL24A" "60S large subunit ribosomal protein L24.e.A" ytygr034w 40,3,0,0 "RPL26B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL26B" "60S large subunit ribosomal protein" ytybl072c 40,3,0,0 "RPS8A" "ribosomal protein S8.e" 5,1,0,0 "RPS8A" "ribosomal protein S8.e" ytydl081c 40,3,0,0 "RPP1A" "60S large subunit acidic ribosomal protein a1" 5,1,0,0 "RPP1A" "60S large subunit acidic ribosomal protein a1" 5,4,0,0 "RPP1A" "60S large subunit acidic ribosomal protein a1" ytylr264w 40,3,0,0 "RPS28B" "40S small subunit ribosomal protein S28.e.c12" 5,1,0,0 "RPS28B" "40S small subunit ribosomal protein S28.e.c12" ytymr142c 40,3,0,0 "RPL13B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL13B" "60S large subunit ribosomal protein" ytyol039w 40,3,0,0 "RPP2A" "acidic ribosomal protein P2.beta" 5,1,0,0 "RPP2A" "acidic ribosomal protein P2.beta" ytylr185w 40,3,0,0 "RPL37A" "ribosomal protein L37.e" 5,1,0,0 "RPL37A" "ribosomal protein L37.e" ytydl083c 40,3,0,0 "RPS16B" "ribosomal protein S16.e" 5,1,0,0 "RPS16B" "ribosomal protein S16.e" ytymr143w 40,3,0,0 "RPS16A" "ribosomal protein S16.e" 5,1,0,0 "RPS16A" "ribosomal protein S16.e" ytygr118w 40,3,0,0 "RPS23A" "40S small subunit ribosomal protein S23.e" 5,1,0,0 "RPS23A" "40S small subunit ribosomal protein S23.e" ytyml063w 40,3,0,0 "RPS1B" "ribosomal protein S3a.e" 5,1,0,0 "RPS1B" "ribosomal protein S3a.e" ytymr242c 40,3,0,0 "RPL20A" "60s large subunit ribosomal protein" 5,1,0,0 "RPL20A" "60s large subunit ribosomal protein" ytygl135w 40,3,0,0 "RPL1B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL1B" "60S large subunit ribosomal protein" ytylr367w 40,3,0,0 "RPS22B" "ribosomal protein S15a.e.c12" 5,1,0,0 "RPS22B" "ribosomal protein S15a.e.c12" ytymr260c - 40,3,0,0 "TIF11" "translation initiation factor eIF1a" 5,4,0,0 "TIF11" "translation initiation factor eIF1a" ytykr094c 40,3,0,0 "RPL40B" "ubiquitin" 5,1,0,0 "RPL40B" "ubiquitin" 6,13,1,0 "RPL40B" "ubiquitin" ytydr382w 40,3,0,0 "RPP2B" "60S large subunit acidic ribosomal protein" 5,1,0,0 "RPP2B" "60S large subunit acidic ribosomal protein" ytybr121c - 40,3,0,0 "GRS1" "glycine--tRNA ligase" 5,10,0,0 "GRS1" "glycine--tRNA ligase" ytynl209w - 40,3,0,0 "SSB2" "heat shock protein of HSP70 family, cytosolic" 5,99,0,0 "SSB2" "heat shock protein of HSP70 family, cytosolic" ytybl027w 40,3,0,0 "RPL19B" "60S large subunit ribosomal protein L19.e" 5,1,0,0 "RPL19B" "60S large subunit ribosomal protein L19.e" ytypl090c 40,3,0,0 "RPS6A" "ribosomal protein S6.e" 5,1,0,0 "RPS6A" "ribosomal protein S6.e" ytyol040c 40,3,0,0 "RPS15" "40S small subunit ribosomal protein" 5,1,0,0 "RPS15" "40S small subunit ribosomal protein" ytynl069c 40,3,0,0 "RPL16B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL16B" "60S large subunit ribosomal protein" ytybr048w 40,3,0,0 "RPS11B" "ribosomal protein S11.e.B" 5,1,0,0 "RPS11B" "ribosomal protein S11.e.B" ytypl079w 40,3,0,0 "RPL21B" "ribosomal protein L21" 5,1,0,0 "RPL21B" "ribosomal protein L21" ytyor063w 40,3,0,0 "RPL3" "60S large subunit ribosomal protein L3.e" 5,1,0,0 "RPL3" "60S large subunit ribosomal protein L3.e" ytyol127w 40,3,0,0 "RPL25" "ribosomal protein L23a.e" 5,1,0,0 "RPL25" "ribosomal protein L23a.e" Propertest Accuracy: 40/44 (90.91%) Propertest Frequency class '5/1/0/0': 78/1292 (6.04%) New (unknown) data (851 items): ytydr417c - 99,0,0,0 "null" "questionable ORF" ytypr044c - 99,0,0,0 "null" "questionable ORF" ytylr062c - 99,0,0,0 "BUD28" "questionable ORF" ytydr398w - 99,0,0,0 "null" "similarity to human KIAA0007 gene" ytymr321c - 99,0,0,0 "null" "strong similarity to hypothetical proteins YPL273w and YLL062c" ytygl102c - 99,0,0,0 "null" "questionable ORF" ytylr339c - 99,0,0,0 "null" "questionable ORF" ytylr435w - 99,0,0,0 "null" "similarity to hypothetical protein B23L21.160 - N. crassa" ytypl142c - 99,0,0,0 "null" "questionable ORF" ytydl062w - 99,0,0,0 "null" "questionable ORF" ytyol124c - 99,0,0,0 "null" "weak similarity to M.jannaschii hypothetical protein" ------------------ Rule 924: gasch1_Heat_Shock_000_minutes__hs_2 > 0.97 gasch1_DBYmsn2/4_real_strain_Plus_0point32_mM_H2O2_20_min > -1.09 gasch2_wt_plus_gamma_30_min <= -0.228 -> class 40/3/0/0 "cytoplasm" Evaluation on training data (1638 items): ytyer131w 40,3,0,0 "RPS26B" "40S small subunit ribosomal protein S26e-c5" 5,1,0,0 "RPS26B" "40S small subunit ribosomal protein S26e-c5" ytyer117w 40,3,0,0 "RPL23B" "ribosomal protein L23.e" 5,1,0,0 "RPL23B" "ribosomal protein L23.e" ytyil052c 40,3,0,0 "RPL34B" "ribosomal protein L34.e" 5,1,0,0 "RPL34B" "ribosomal protein L34.e" ytybr181c 40,3,0,0 "RPS6B" "ribosomal protein S6.e" 5,1,0,0 "RPS6B" "ribosomal protein S6.e" ytyil133c 40,3,0,0 "RPL16A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL16A" "60S large subunit ribosomal protein" ytybr249c 1,1,1,0 "ARO4" "2-dehydro-3-deoxyphosphoheptonate aldolase, tyrosine-inhibited" 40,3,0,0 "ARO4" "2-dehydro-3-deoxyphosphoheptonate aldolase, tyrosine-inhibited" ytyhr021c 40,3,0,0 "RPS27B" "ribosomal protein S27.e" 5,1,0,0 "RPS27B" "ribosomal protein S27.e" ytybl087c 40,3,0,0 "RPL23A" "60S large subunit ribosomal protein L23.e" 5,1,0,0 "RPL23A" "60S large subunit ribosomal protein L23.e" ytykl081w 40,3,0,0 "TEF4" "translation elongation factor eEF1, gamma chain" 5,4,0,0 "TEF4" "translation elongation factor eEF1, gamma chain" ytyor182c 40,3,0,0 "RPS30B" "ribosomal protein S30" 5,1,0,0 "RPS30B" "ribosomal protein S30" ytygr148c 40,3,0,0 "RPL24B" "60S large subunit ribosomal protein L24.e.B" 5,1,0,0 "RPL24B" "60S large subunit ribosomal protein L24.e.B" ytydr450w 40,3,0,0 "RPS18A" "ribosomal protein S18.e.c4" 5,1,0,0 "RPS18A" "ribosomal protein S18.e.c4" ytylr029c 40,3,0,0 "RPL15A" "60s large subunit ribosomal protein L15.e.c12" 5,1,0,0 "RPL15A" "60s large subunit ribosomal protein L15.e.c12" ytygl147c 40,3,0,0 "RPL9A" "ribosomal protein L9.e" 5,1,0,0 "RPL9A" "ribosomal protein L9.e" ytybr189w 40,3,0,0 "RPS9B" "ribosomal protein S9.e.B" 5,1,0,0 "RPS9B" "ribosomal protein S9.e.B" ytygl148w 1,1,1,0 "ARO2" "chorismate synthase" 40,3,0,0 "ARO2" "chorismate synthase" ytybr031w 40,3,0,0 "RPL4A" "ribosomal protein" 5,1,0,0 "RPL4A" "ribosomal protein" ytykl180w 40,3,0,0 "RPL17A" "ribosomal protein L17.e" 5,1,0,0 "RPL17A" "ribosomal protein L17.e" ytylr061w - 5,1,0,0 "RPL22A" "ribosomal protein" ytykl181w - 1,1,1,0 "PRS1" "ribose-phosphate pyrophosphokinase" 1,3,1,0 "PRS1" "ribose-phosphate pyrophosphokinase" 1,3,4,0 "PRS1" "ribose-phosphate pyrophosphokinase" 14,4,3,1 "PRS1" "ribose-phosphate pyrophosphokinase" ytylr048w 40,3,0,0 "RPS0B" "40S ribosomal protein p40 homolog B" 5,1,0,0 "RPS0B" "40S ribosomal protein p40 homolog B" 6,10,0,0 "RPS0B" "40S ribosomal protein p40 homolog B" ytybr084c-a 40,3,0,0 "RPL19A" "60S large subunit ribosomal protein L19.e" 5,1,0,0 "RPL19A" "60S large subunit ribosomal protein L19.e" ytyhr141c 40,3,0,0 "RPL42B" "ribosomal protein L36a.e" 5,1,0,0 "RPL42B" "ribosomal protein L36a.e" ytydr300c 1,1,1,0 "PRO1" "glutamate 5-kinase" 40,3,0,0 "PRO1" "glutamate 5-kinase" ytyer056c-a 40,3,0,0 "RPL34A" "ribosomal protein L34" 5,1,0,0 "RPL34A" "ribosomal protein L34" ytyml022w - 1,3,1,0 "APT1" "adenine phosphoribosyltransferase" ytyor369c 40,3,0,0 "RPS12" "40S small subunit acidic ribosomal protein S12" 5,1,0,0 "RPS12" "40S small subunit acidic ribosomal protein S12" ytydr064w 40,3,0,0 "RPS13" "ribosomal protein" 5,1,0,0 "RPS13" "ribosomal protein" ytygr285c - 40,10,3,0 "ZUO1" "zuotin, a putative Z-DNA binding protein" ytylr340w 40,3,0,0 "RPP0" "acidic ribosomal protein L10.e" 5,1,0,0 "RPP0" "acidic ribosomal protein L10.e" ytylr180w - 1,1,1,0 "SAM1" "S-adenosylmethionine synthetase 1" 1,1,10,0 "SAM1" "S-adenosylmethionine synthetase 1" ytylr167w 40,3,0,0 "RPS31" "ubiquitin/40S small subunit ribosomal protein" 5,1,0,0 "RPS31" "ubiquitin/40S small subunit ribosomal protein" 6,13,1,0 "RPS31" "ubiquitin/40S small subunit ribosomal protein" ytygl030w 40,3,0,0 "RPL30" "60S large subunit ribosomal protein L30.e" 5,1,0,0 "RPL30" "60S large subunit ribosomal protein L30.e" ytyer025w 40,3,0,0 "GCD11" "translation initiation factor eIF2 gamma chain" 5,4,0,0 "GCD11" "translation initiation factor eIF2 gamma chain" ytylr249w 30,1,0,0 "YEF3" "translation elongation factor eEF3" 40,3,0,0 "YEF3" "translation elongation factor eEF3" 5,4,0,0 "YEF3" "translation elongation factor eEF3" ytylr344w 40,3,0,0 "RPL26A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL26A" "60S large subunit ribosomal protein" ytydr500c 40,3,0,0 "RPL37B" "ribosomal protein L.37.e" 5,1,0,0 "RPL37B" "ribosomal protein L.37.e" ytyor312c 40,3,0,0 "RPL20B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL20B" "60S large subunit ribosomal protein" ytynl178w 40,3,0,0 "RPS3" "ribosomal protein S3.e" 5,1,0,0 "RPS3" "ribosomal protein S3.e" ytyhr010w 40,3,0,0 "RPL27A" "60S large subunit ribosomal protein L27.e" 5,1,0,0 "RPL27A" "60S large subunit ribosomal protein L27.e" ytyor234c - 5,1,0,0 "RPL33B" "ribosomal protein L35a.e.c15" ytygr214w 14,4,3,1 "RPS0A" "40S ribosomal protein p40 homolog A" 40,3,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" 5,1,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" 6,10,0,0 "RPS0A" "40S ribosomal protein p40 homolog A" ytykr057w 40,3,0,0 "RPS21A" "ribosomal protein S21.e" 5,1,0,0 "RPS21A" "ribosomal protein S21.e" ytyjl177w 40,3,0,0 "RPL17B" "60s large subunit ribosomal protein L17.e" 5,1,0,0 "RPL17B" "60s large subunit ribosomal protein L17.e" ytybl092w 40,3,0,0 "RPL32" "60S large subunit ribosomal protein L32.e" 5,1,0,0 "RPL32" "60S large subunit ribosomal protein L32.e" ytyhl011c - 1,1,1,0 "PRS3" "ribose-phosphate pyrophosphokinase" 1,3,1,0 "PRS3" "ribose-phosphate pyrophosphokinase" 1,3,4,0 "PRS3" "ribose-phosphate pyrophosphokinase" ytyel046c - 1,1,1,0 "GLY1" "L-threonine aldolase, low-specific" 1,1,10,0 "GLY1" "L-threonine aldolase, low-specific" ytybr191w 40,3,0,0 "RPL21A" "ribosomal protein L21.e" 5,1,0,0 "RPL21A" "ribosomal protein L21.e" ytydr280w - 4,1,4,0 "RRP45" "rRNA processing protein" ytylr448w 40,3,0,0 "RPL6B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL6B" "60S large subunit ribosomal protein" ytygr234w 11,1,0,0 "YHB1" "flavohemoglobin" 40,3,0,0 "YHB1" "flavohemoglobin" ytypr132w 40,3,0,0 "RPS23B" "40S small subunit ribosomal protein S23.e" 5,1,0,0 "RPS23B" "40S small subunit ribosomal protein S23.e" ytycr072c - 40,10,0,0 "null" "strong similarity to S. pombe trp-asp repeat containing protein" ytyhl015w 40,3,0,0 "RPS20" "ribosomal protein" 5,1,0,0 "RPS20" "ribosomal protein" ytyhr019c - 5,10,0,0 "DED81" "asparaginyl-tRNA-synthetase" ytypl131w 40,3,0,0 "RPL5" "60S large subunit ribosomal protein L5.e" 5,1,0,0 "RPL5" "60S large subunit ribosomal protein L5.e" ytyil148w 40,3,0,0 "RPL40A" "ubiquitin" 5,1,0,0 "RPL40A" "ubiquitin" 6,13,1,0 "RPL40A" "ubiquitin" ytyjr123w 40,3,0,0 "RPS5" "ribosomal protein S5.e" 5,1,0,0 "RPS5" "ribosomal protein S5.e" ytydr447c 40,3,0,0 "RPS17B" "ribosomal protein S17.e.B" 5,1,0,0 "RPS17B" "ribosomal protein S17.e.B" ytygl076c 40,3,0,0 "RPL7A" "60S large subunit ribosomal protein L7.e.A" 5,1,0,0 "RPL7A" "60S large subunit ribosomal protein L7.e.A" ytynl301c 40,3,0,0 "RPL18B" "60S large subunit ribosomal protein L18.e" 5,1,0,0 "RPL18B" "60S large subunit ribosomal protein L18.e" ytynl062c 4,3,3,0 "GCD10" "translation initiation factor eIF3 RNA-binding subunit" 40,3,0,0 "GCD10" "translation initiation factor eIF3 RNA-binding subunit" 5,4,0,0 "GCD10" "translation initiation factor eIF3 RNA-binding subunit" ytyor276w 40,3,0,0 "CAF20" "mRNA CAP-binding protein (eIF4F), 20K subunit" 5,4,0,0 "CAF20" "mRNA CAP-binding protein (eIF4F), 20K subunit" ytyir012w 40,3,0,0 "SQT1" "suppresses dominant-negative mutants of the ribosomal protein QSR1" 6,10,0,0 "SQT1" "suppresses dominant-negative mutants of the ribosomal protein QSR1" ytyor293w 40,3,0,0 "RPS10A" "ribosomal protein S10.e" 5,1,0,0 "RPS10A" "ribosomal protein S10.e" ytynl067w 40,3,0,0 "RPL9B" "ribosomal protein L9.e.c14" 5,1,0,0 "RPL9B" "ribosomal protein L9.e.c14" ytyol120c 40,3,0,0 "RPL18A" "60S large subunit ribosomal protein S18.e" 5,1,0,0 "RPL18A" "60S large subunit ribosomal protein S18.e" ytymr116c 2,16,0,0 "ASC1" "40S small subunit ribosomal protein" 40,3,0,0 "ASC1" "40S small subunit ribosomal protein" 5,1,0,0 "ASC1" "40S small subunit ribosomal protein" 5,4,0,0 "ASC1" "40S small subunit ribosomal protein" ytyil018w 40,3,0,0 "RPL2B" "60S large subunit ribosomal protein L8.e" 5,1,0,0 "RPL2B" "60S large subunit ribosomal protein L8.e" ytyfr031c-a - 5,1,0,0 "RPL2A" "ribosomal protein L8.e" Training Accuracy: 58/70 (82.86%) Training Frequency class '40/3/0/0': 242/1638 (14.77%) Evaluation on validation data (851 items): ytyjl190c 40,3,0,0 "RPS22A" "ribosomal protein S15a.e.c10" 5,1,0,0 "RPS22A" "ribosomal protein S15a.e.c10" ytyhl001w 40,3,0,0 "RPL14B" "ribosomal protein" 5,1,0,0 "RPL14B" "ribosomal protein" ytyjr007w 40,3,0,0 "SUI2" "translation initiation factor eIF2, alpha chain" 5,4,0,0 "SUI2" "translation initiation factor eIF2, alpha chain" ytydr012w 40,3,0,0 "RPL4B" "ribosomal protein L4.e.B" 5,1,0,0 "RPL4B" "ribosomal protein L4.e.B" ytyel054c 40,3,0,0 "RPL12A" "60S large subunit ribosomal protein L12.e" 5,1,0,0 "RPL12A" "60S large subunit ribosomal protein L12.e" ytyol149w - 4,5,5,0 "DCP1" "mRNA decapping enzyme" ytyjl189w 40,3,0,0 "RPL39" "60S large subunit ribosomal protein L39.e" 5,1,0,0 "RPL39" "60S large subunit ribosomal protein L39.e" ytyor096w 40,3,0,0 "RPS7A" "ribosomal protein" 5,1,0,0 "RPS7A" "ribosomal protein" ytyhr203c 40,3,0,0 "RPS4B" "ribosomal protein S4.e.c8" 5,1,0,0 "RPS4B" "ribosomal protein S4.e.c8" ytyhl033c 40,3,0,0 "RPL8A" "60S large subunit ribosomal protein L7a.e.A" 5,1,0,0 "RPL8A" "60S large subunit ribosomal protein L7a.e.A" ytylr388w 40,3,0,0 "RPS29A" "ribosomal protein S29.e.A" 5,1,0,0 "RPS29A" "ribosomal protein S29.e.A" ytyer165w 4,5,5,0 "PAB1" "mRNA polyadenylate-binding protein" 40,10,0,0 "PAB1" "mRNA polyadenylate-binding protein" 40,3,0,0 "PAB1" "mRNA polyadenylate-binding protein" 5,4,0,0 "PAB1" "mRNA polyadenylate-binding protein" ytygr264c 40,3,0,0 "MES1" "methionyl-tRNA synthetase" 5,10,0,0 "MES1" "methionyl-tRNA synthetase" ytyhr062c - 4,1,4,0 "RPP1" "required for processing of tRNA and 35S rRNA" 4,3,3,0 "RPP1" "required for processing of tRNA and 35S rRNA" 40,10,0,0 "RPP1" "required for processing of tRNA and 35S rRNA" ytyjr145c 40,3,0,0 "RPS4A" "ribosomal protein S4.e.c10" 5,1,0,0 "RPS4A" "ribosomal protein S4.e.c10" ytyil011w - 11,1,0,0 "TIR3" "strong similarity to members of the SRP1P/TIP1P family" ytylr075w 3,3,1,0 "RPL10" "60S large subunit ribosomal protein" 40,3,0,0 "RPL10" "60S large subunit ribosomal protein" 5,1,0,0 "RPL10" "60S large subunit ribosomal protein" 6,10,0,0 "RPL10" "60S large subunit ribosomal protein" ytynl162w 40,3,0,0 "RPL42A" "ribosomal protein L36a.e" 5,1,0,0 "RPL42A" "ribosomal protein L36a.e" ytybr143c 40,3,0,0 "SUP45" "translational release factor" 5,4,0,0 "SUP45" "translational release factor" ytylr325c 40,3,0,0 "RPL38" "60S large subunit ribosomal protein" 5,1,0,0 "RPL38" "60S large subunit ribosomal protein" ytyol121c 40,3,0,0 "RPS19A" "40S small subunit ribosomal protein S19.e" 5,1,0,0 "RPS19A" "40S small subunit ribosomal protein S19.e" ytyer102w 40,3,0,0 "RPS8B" "ribosomal protein S8.e" 5,1,0,0 "RPS8B" "ribosomal protein S8.e" ytylr333c 40,3,0,0 "RPS25B" "ribosomal protein S25.e.c12" 5,1,0,0 "RPS25B" "ribosomal protein S25.e.c12" ytydl136w 40,3,0,0 "RPL35B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL35B" "60S large subunit ribosomal protein" ytygl103w 40,3,0,0 "RPL28" "60S large subunit ribosomal protein L27a.e" 5,1,0,0 "RPL28" "60S large subunit ribosomal protein L27a.e" ytypr102c 40,3,0,0 "RPL11A" "ribosomal protein L11.e" 5,1,0,0 "RPL11A" "ribosomal protein L11.e" ytycr034w - 1,5,1,0 "FEN1" "fatty acid elongase required for sphingolipid formation" 1,6,1,0 "FEN1" "fatty acid elongase required for sphingolipid formation" 14,1,0,0 "FEN1" "fatty acid elongase required for sphingolipid formation" 14,4,3,1 "FEN1" "fatty acid elongase required for sphingolipid formation" 14,4,3,3 "FEN1" "fatty acid elongase required for sphingolipid formation" 14,4,3,5 "FEN1" "fatty acid elongase required for sphingolipid formation" 40,2,0,0 "FEN1" "fatty acid elongase required for sphingolipid formation" ytylr441c 14,4,3,3 "RPS1A" "ribosomal protein S3a.e" 40,3,0,0 "RPS1A" "ribosomal protein S3a.e" 5,1,0,0 "RPS1A" "ribosomal protein S3a.e" Validation Accuracy: 24/28 (85.71%) Validation Frequency class '40/3/0/0': 114/851 (13.40%) Evaluation on propertest data (1292 items): ytygl123w 40,3,0,0 "RPS2" "40S small subunit ribosomal protein" 5,1,0,0 "RPS2" "40S small subunit ribosomal protein" ytyer055c - 1,1,1,0 "HIS1" "ATP phosphoribosyltransferase" 1,1,4,0 "HIS1" "ATP phosphoribosyltransferase" ytypl198w 40,3,0,0 "RPL7B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL7B" "60S large subunit ribosomal protein" ytyml073c 40,3,0,0 "RPL6A" "60S large subunit ribosomal protein" 5,1,0,0 "RPL6A" "60S large subunit ribosomal protein" ytypr043w 40,3,0,0 "RPL43A" "ribosomal protein L37a.e" 5,1,0,0 "RPL43A" "ribosomal protein L37a.e" ytynl112w - 4,1,4,0 "DBP2" "ATP-dependent RNA helicase of DEAD box family" 40,10,0,0 "DBP2" "ATP-dependent RNA helicase of DEAD box family" ytyor167c 40,3,0,0 "RPS28A" "40S small subunit ribosomal protein S28.e.c15" 5,1,0,0 "RPS28A" "40S small subunit ribosomal protein S28.e.c15" ytygl225w - 40,8,0,0 "GOG5" "GDP-mannose transporter into the lumen of the Golgi" 67,7,0,0 "GOG5" "GDP-mannose transporter into the lumen of the Golgi" 8,7,0,0 "GOG5" "GDP-mannose transporter into the lumen of the Golgi" ytyer074w 40,3,0,0 "RPS24A" "40s small subunit ribosomal protein S24.e" 5,1,0,0 "RPS24A" "40s small subunit ribosomal protein S24.e" ytygr085c 40,3,0,0 "RPL11B" "ribosomal protein" 5,1,0,0 "RPL11B" "ribosomal protein" ytypl220w 40,3,0,0 "RPL1A" "ribosomal protein" 5,1,0,0 "RPL1A" "ribosomal protein" ytyll045c 40,3,0,0 "RPL8B" "60s large subunit ribosomal protein L7a.e.B" 5,1,0,0 "RPL8B" "60s large subunit ribosomal protein L7a.e.B" ytynl119w - 5,1,0,0 "null" "weak similarity to M.jannaschii hypothetical protein MJ1257" ytypl143w 40,3,0,0 "RPL33A" "ribosomal protein L35a.e.c16" 5,1,0,0 "RPL33A" "ribosomal protein L35a.e.c16" ytydr471w 40,3,0,0 "RPL27B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL27B" "60S large subunit ribosomal protein" ytynl151c - 4,1,1,0 "RPC31" "DNA-directed RNA polymerase III, 31 KD subunit" 4,3,1,0 "RPC31" "DNA-directed RNA polymerase III, 31 KD subunit" 40,10,0,0 "RPC31" "DNA-directed RNA polymerase III, 31 KD subunit" ytypr163c 40,3,0,0 "TIF3" "translation initiation factor eIF4B" 5,4,0,0 "TIF3" "translation initiation factor eIF4B" ytyjl136c 40,3,0,0 "RPS21B" "40S small subunit ribosomal protein S21.e" 5,1,0,0 "RPS21B" "40S small subunit ribosomal protein S21.e" ytyjl138c 40,3,0,0 "TIF2" "translation initiation factor eIF4A" 5,4,0,0 "TIF2" "translation initiation factor eIF4A" ytyor212w - 10,1,5,5 "STE4" "GTP-binding protein beta subunit of the pheromone pathway" 13,11,3,7 "STE4" "GTP-binding protein beta subunit of the pheromone pathway" 14,4,3,1 "STE4" "GTP-binding protein beta subunit of the pheromone pathway" 14,4,3,3 "STE4" "GTP-binding protein beta subunit of the pheromone pathway" 40,2,0,0 "STE4" "GTP-binding protein beta subunit of the pheromone pathway" ytygl031c 40,3,0,0 "RPL24A" "60S large subunit ribosomal protein L24.e.A" 5,1,0,0 "RPL24A" "60S large subunit ribosomal protein L24.e.A" ytygr034w 40,3,0,0 "RPL26B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL26B" "60S large subunit ribosomal protein" ytynl255c - 4,99,0,0 "GIS2" "strong similarity to nucleic acid-binding proteins, similarity to Tetrahymena thermophila cnjB protein" 5,1,0,0 "GIS2" "strong similarity to nucleic acid-binding proteins, similarity to Tetrahymena thermophila cnjB protein" ytybl072c 40,3,0,0 "RPS8A" "ribosomal protein S8.e" 5,1,0,0 "RPS8A" "ribosomal protein S8.e" ytylr185w 40,3,0,0 "RPL37A" "ribosomal protein L37.e" 5,1,0,0 "RPL37A" "ribosomal protein L37.e" ytyer043c - 1,7,1,0 "SAH1" "S-adenosyl-L-homocysteine hydrolase" ytygr118w 40,3,0,0 "RPS23A" "40S small subunit ribosomal protein S23.e" 5,1,0,0 "RPS23A" "40S small subunit ribosomal protein S23.e" ytyml063w 40,3,0,0 "RPS1B" "ribosomal protein S3a.e" 5,1,0,0 "RPS1B" "ribosomal protein S3a.e" ytymr242c 40,3,0,0 "RPL20A" "60s large subunit ribosomal protein" 5,1,0,0 "RPL20A" "60s large subunit ribosomal protein" ytykr059w 40,3,0,0 "TIF1" "translation initiation factor 4A" 5,4,0,0 "TIF1" "translation initiation factor 4A" ytydl182w - 1,1,1,0 "LYS20" "homocitrate synthase" 1,5,1,0 "LYS20" "homocitrate synthase" 40,10,0,0 "LYS20" "homocitrate synthase" ytygl135w 40,3,0,0 "RPL1B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL1B" "60S large subunit ribosomal protein" ytydr429c 40,3,0,0 "TIF35" "translation initiation factor eIF3 (p33 subunit)" 5,4,0,0 "TIF35" "translation initiation factor eIF3 (p33 subunit)" ytynl209w 40,3,0,0 "SSB2" "heat shock protein of HSP70 family, cytosolic" 5,99,0,0 "SSB2" "heat shock protein of HSP70 family, cytosolic" ytybl027w 40,3,0,0 "RPL19B" "60S large subunit ribosomal protein L19.e" 5,1,0,0 "RPL19B" "60S large subunit ribosomal protein L19.e" ytynl069c 40,3,0,0 "RPL16B" "60S large subunit ribosomal protein" 5,1,0,0 "RPL16B" "60S large subunit ribosomal protein" ytybr048w 40,3,0,0 "RPS11B" "ribosomal protein S11.e.B" 5,1,0,0 "RPS11B" "ribosomal protein S11.e.B" ytygr027c 40,3,0,0 "RPS25A" "ribosomal protein S25.e.c7" 5,1,0,0 "RPS25A" "ribosomal protein S25.e.c7" ytyol127w 40,3,0,0 "RPL25" "ribosomal protein L23a.e" 5,1,0,0 "RPL25" "ribosomal protein L23a.e" Propertest Accuracy: 30/39 (76.92%) Propertest Frequency class '40/3/0/0': 195/1292 (15.09%) New (unknown) data (851 items): ytydr417c - 99,0,0,0 "null" "questionable ORF" ytyer156c - 99,0,0,0 "null" "similarity to hypothetical C. elegans protein C27H6.5" ytyil158w - 99,0,0,0 "null" "similarity to hypothetical protein YKR100c" ytylr062c - 99,0,0,0 "BUD28" "questionable ORF" ytyol077c - 99,0,0,0 "BRX1" "strong similarity to C.elegans K12H4.3 protein" ytypr118w - 99,0,0,0 "null" "similarity to M.jannaschii translation initiation factor, eIF-2B" ytyol101c - 99,0,0,0 "null" "similarity to YOL002c and YDR492w" ytyml018c - 99,0,0,0 "null" "similarity to YDR438w" ytygl102c - 99,0,0,0 "null" "questionable ORF" ytyjl069c - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein" ytygr123c - 98,0,0,0 "PPT1" "protein ser/thr phosphatase" ytynl010w - 99,0,0,0 "null" "weak similarity to B.subtilis hypothetical protein ykrX" ytydr430c - 99,0,0,0 "null" "similarity to C.perfringens hypothetical hypA protein" ytycr047c - 98,0,0,0 "BUD23" "weak similarity to N-methyltransferases" ytydr339c - 99,0,0,0 "null" "weak similarity to hypothetical protein YOR004w" ytypl142c - 99,0,0,0 "null" "questionable ORF" ytycr087w - 99,0,0,0 "null" "questionable ORF" ytylr405w - 99,0,0,0 "null" "similarity to A.brasilense nifR3 protein" ytymr305c - 98,0,0,0 "SCW10" "similarity to B.japonicum putative beta-(-6)glucan transferase" ytycr051w - 99,0,0,0 "null" "weak similarity to ankyrins" ytydl166c - 99,0,0,0 "null" "weak similarity to Pyrococcus horikoshii hypothetical protein PHBJ019" ytydr346c - 99,0,0,0 "null" "similarity to hypothetical S.pombe protein" ytynr046w - 99,0,0,0 "null" "strong similarity to S.pombe hypothetical protein SPAC31A2.02" ytygr079w - 99,0,0,0 "null" "hypothetical protein" ytylr413w - 99,0,0,0 "null" "strong similarity to YKL187c" ytyor145c - 99,0,0,0 "null" "strong similarity to hypothtical S. pombe protein and to hypothetical C. elegans protein" ------------------ Rule 27: gasch1_YP_fructose_vs_reference_pool_car_2 <= -0.67 gasch2_wt_plus_gamma_5_min <= 0.036 -> class 40/16/0/0 "mitochondrion" Evaluation on training data (1638 items): ytykl141w 2,13,0,0 "SDH3" "cytochrome b560 subunit of respiratory complex II" 40,16,0,0 "SDH3" "cytochrome b560 subunit of respiratory complex II" ytypr200c - 11,7,0,0 "ARR2" "arsenate reductase" ytyel053c - 2,13,0,0 "MAK10" "glucose-repressible protein" ytylr295c 13,1,1,3 "ATP14" "F1F0-ATPase complex, subunit h" 2,13,0,0 "ATP14" "F1F0-ATPase complex, subunit h" 40,16,0,0 "ATP14" "F1F0-ATPase complex, subunit h" 67,50,22,0 "ATP14" "F1F0-ATPase complex, subunit h" 8,4,0,0 "ATP14" "F1F0-ATPase complex, subunit h" ytygr067c - 4,99,0,0 "null" "weak similarity to transcription factors" ytydl004w 13,1,1,3 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 2,13,0,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 40,16,0,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 67,50,22,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 8,4,0,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" ytyal039c 1,7,4,0 "CYC3" "holocytochrome-c synthase (cytochrome c heme lyase)" 40,16,0,0 "CYC3" "holocytochrome-c synthase (cytochrome c heme lyase)" 6,7,99,0 "CYC3" "holocytochrome-c synthase (cytochrome c heme lyase)" ytymr256c 2,13,0,0 "COX7" "cytochrome-c oxidase, subunit VII" 40,16,0,0 "COX7" "cytochrome-c oxidase, subunit VII" 6,10,0,0 "COX7" "cytochrome-c oxidase, subunit VII" ytynl052w 2,13,0,0 "COX5A" "cytochrome-c oxidase chain V.A precursor" 40,16,0,0 "COX5A" "cytochrome-c oxidase chain V.A precursor" ytybr018c - 1,5,1,0 "GAL7" "UDP-glucose--hexose-1-phosphate uridylyltransferase" 40,3,0,0 "GAL7" "UDP-glucose--hexose-1-phosphate uridylyltransferase" ytybr019c - 1,5,1,0 "GAL10" "UDP-glucose 4-epimerase" 40,3,0,0 "GAL10" "UDP-glucose 4-epimerase" ytynr057c - 1,7,1,0 "BIO4" "putative dethiobiotin synthetase" ytydr536w - 1,5,7,0 "STL1" "member of the sugar permease family" 40,2,0,0 "STL1" "member of the sugar permease family" 67,7,0,0 "STL1" "member of the sugar permease family" ytygr248w - 4,3,3,0 "SOL4" "strong similarity to SOL3P" ytydr125c - 30,1,0,0 "ECM18" "involved in cell wall biogenesis and architecture" ytybr117c - 1,1,1,0 "TKL2" "transketolase 2" 1,5,1,0 "TKL2" "transketolase 2" 2,7,0,0 "TKL2" "transketolase 2" 40,3,0,0 "TKL2" "transketolase 2" ytymr104c - 3,3,1,0 "YPK2" "ser/thr protein kinase" ytybr039w 13,1,1,3 "ATP3" "F1F0-ATPase complex, F1 gamma subunit" 2,13,0,0 "ATP3" "F1F0-ATPase complex, F1 gamma subunit" 40,16,0,0 "ATP3" "F1F0-ATPase complex, F1 gamma subunit" 67,50,22,0 "ATP3" "F1F0-ATPase complex, F1 gamma subunit" 8,4,0,0 "ATP3" "F1F0-ATPase complex, F1 gamma subunit" ytykl016c 13,1,1,3 "ATP7" "F1F0-ATPase complex, FO D subunit" 2,13,0,0 "ATP7" "F1F0-ATPase complex, FO D subunit" 40,16,0,0 "ATP7" "F1F0-ATPase complex, FO D subunit" 67,50,22,0 "ATP7" "F1F0-ATPase complex, FO D subunit" 8,4,0,0 "ATP7" "F1F0-ATPase complex, FO D subunit" ytynl093w - 6,4,0,0 "YPT53" "GTP-binding protein of the RAB family (RAS superfamily)" 8,13,0,0 "YPT53" "GTP-binding protein of the RAB family (RAS superfamily)" 8,19,0,0 "YPT53" "GTP-binding protein of the RAB family (RAS superfamily)" ytylr168c 40,16,0,0 "(MSF1)" "probably involved in intramitochondrial protein sorting" 6,4,0,0 "(MSF1)" "probably involved in intramitochondrial protein sorting" ytyfl059w - 11,1,0,0 "SNZ3" "strong similarity to Para rubber tree ethylene-responsive protein1" ytyjr095w 1,5,4,0 "SFC1" "succinate-fumarate transporter" 1,5,7,0 "SFC1" "succinate-fumarate transporter" 40,16,0,0 "SFC1" "succinate-fumarate transporter" 67,7,0,0 "SFC1" "succinate-fumarate transporter" 8,4,0,0 "SFC1" "succinate-fumarate transporter" ytydl067c 2,13,0,0 "COX9" "cytochrome-c oxidase chain VIIA" 40,16,0,0 "COX9" "cytochrome-c oxidase chain VIIA" 6,10,0,0 "COX9" "cytochrome-c oxidase chain VIIA" ytyel024w 2,13,0,0 "RIP1" "ubiquinol--cytochrome-c reductase iron-sulfur protein precursor" 40,16,0,0 "RIP1" "ubiquinol--cytochrome-c reductase iron-sulfur protein precursor" ytydr405w 40,16,0,0 "MRP20" "ribosomal protein of the large subunit, mitochondrial" 5,1,0,0 "MRP20" "ribosomal protein of the large subunit, mitochondrial" ytymr145c 2,13,0,0 "NDH1" "mitochondrial cytosolically directed NADH dehydrogenase" 40,16,0,0 "NDH1" "mitochondrial cytosolically directed NADH dehydrogenase" ytyll013c - 1,3,16,1 "PUF3" "transcript-specific regulator of mRNA degradation" ytyjr121w 13,1,1,3 "ATP2" "F1F0-ATPase complex, F1 beta subunit" 2,13,0,0 "ATP2" "F1F0-ATPase complex, F1 beta subunit" 40,16,0,0 "ATP2" "F1F0-ATPase complex, F1 beta subunit" 67,50,22,0 "ATP2" "F1F0-ATPase complex, F1 beta subunit" 8,4,0,0 "ATP2" "F1F0-ATPase complex, F1 beta subunit" ytypl134c - 67,16,0,0 "ODC1" "similarity to ADP,ATP carrier proteins" 8,4,0,0 "ODC1" "similarity to ADP,ATP carrier proteins" ytydr529c 2,13,0,0 "QCR7" "ubiquinol--cytochrome-c reductase subunit 7" 40,16,0,0 "QCR7" "ubiquinol--cytochrome-c reductase subunit 7" 6,10,0,0 "QCR7" "ubiquinol--cytochrome-c reductase subunit 7" ytyjr048w 2,13,0,0 "CYC1" "cytochrome-c isoform 1" 40,16,0,0 "CYC1" "cytochrome-c isoform 1" ytypl072w - 6,13,0,0 "UBP16" "weak similarity to UBP11P" ytygl191w 2,13,0,0 "COX13" "cytochrome-c oxidase chain VIa" 40,16,0,0 "COX13" "cytochrome-c oxidase chain VIa" ytybl043w - 30,1,0,0 "ECM13" "involved in cell wall structure of biosynthesis" ytydl119c 40,16,0,0 "null" "similarity to bovine Graves disease carrier protein" 8,4,0,0 "null" "similarity to bovine Graves disease carrier protein" ytydr150w - 3,3,1,0 "NUM1" "nuclear migration protein" ytycr021c - 11,1,0,0 "HSP30" "heat shock protein" 13,1,1,3 "HSP30" "heat shock protein" 40,2,0,0 "HSP30" "heat shock protein" ytyel012w - 6,7,0,0 "UBC8" "E2 ubiquitin-conjugating enzyme" ytypl271w 13,1,1,3 "ATP15" "F1F0-ATPase complex, F1 epsilon subunit" 2,13,0,0 "ATP15" "F1F0-ATPase complex, F1 epsilon subunit" 40,16,0,0 "ATP15" "F1F0-ATPase complex, F1 epsilon subunit" 67,50,22,0 "ATP15" "F1F0-ATPase complex, F1 epsilon subunit" 8,4,0,0 "ATP15" "F1F0-ATPase complex, F1 epsilon subunit" ytygr043c - 1,5,1,0 "null" "strong similarity to transaldolase" 2,7,0,0 "null" "strong similarity to transaldolase" ytyml054c 1,5,1,0 "CYB2" "lactate dehydrogenase cytochrome b2" 2,13,0,0 "CYB2" "lactate dehydrogenase cytochrome b2" 40,16,0,0 "CYB2" "lactate dehydrogenase cytochrome b2" Training Accuracy: 21/42 (50.00%) Training Frequency class '40/16/0/0': 140/1638 (8.55%) Evaluation on validation data (851 items): ytyor065w 2,13,0,0 "CYT1" "cytochrome-c1" 40,16,0,0 "CYT1" "cytochrome-c1" ytykl217w - 1,5,7,0 "JEN1" "carboxylic acid transporter protein" 67,7,0,0 "JEN1" "carboxylic acid transporter protein" ytyel059c-a 30,16,0,0 "SOM1" "required for mitochondrial IMP1 peptidase function" 40,16,0,0 "SOM1" "required for mitochondrial IMP1 peptidase function" 6,4,0,0 "SOM1" "required for mitochondrial IMP1 peptidase function" 8,4,0,0 "SOM1" "required for mitochondrial IMP1 peptidase function" ytykr076w - 30,1,0,0 "ECM4" "involved in cell wall biogenesis and architecture" ytyfr033c 2,13,0,0 "QCR6" "ubiquinol--cytochrome-c reductase 17K protein" 40,16,0,0 "QCR6" "ubiquinol--cytochrome-c reductase 17K protein" ytylr394w - 3,1,5,0 "CST9" "protein required for synapsis, meiotic recombination, sporulation, proper chromosome segregation, and synaptonemal complex formation" ytylr136c - 4,3,6,0 "TIS11" "tRNA-specific adenosine deaminase 3" ytylr151c - 1,7,99,0 "PCD1" "peroxisomal nudix hydrolase, has diphosphatase activity specific for coenzyme A and CoA derivatives" ytyor110w - 1,5,4,0 "TFC7" "TFIIIC (transcription initiation factor) subunit, 55 kDa" 4,1,1,0 "TFC7" "TFIIIC (transcription initiation factor) subunit, 55 kDa" 4,3,1,0 "TFC7" "TFIIIC (transcription initiation factor) subunit, 55 kDa" 40,10,0,0 "TFC7" "TFIIIC (transcription initiation factor) subunit, 55 kDa" ytybr050c - 1,5,4,0 "REG2" "regulatory subunit of type I protein phosphatase" ytyor107w - 10,1,5,5 "RGS2" "negative regulator of glucose-induced cAMP signaling pathway" 62,2,5,0 "RGS2" "negative regulator of glucose-induced cAMP signaling pathway" ytypl078c 13,1,1,3 "ATP4" "F1F0-ATPase complex, F0 subunit B" 2,13,0,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" 40,16,0,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" 67,50,22,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" 8,4,0,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" ytyjr077c 1,4,7,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 13,1,3,3 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 40,16,0,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 67,4,7,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 8,4,0,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" ytynl318c - 1,5,7,0 "HXT14" "hexose transport protein" 40,2,0,0 "HXT14" "hexose transport protein" 67,7,0,0 "HXT14" "hexose transport protein" 8,19,0,0 "HXT14" "hexose transport protein" ytypr191w 2,13,0,0 "QCR2" "ubiquinol--cytochrome-c reductase 40KD chain II" 40,16,0,0 "QCR2" "ubiquinol--cytochrome-c reductase 40KD chain II" 6,10,0,0 "QCR2" "ubiquinol--cytochrome-c reductase 40KD chain II" ytynl333w - 1,7,1,0 "SNZ2" "putative pyridoxine (vitamin B6) biosynthetic enzyme" 11,1,0,0 "SNZ2" "putative pyridoxine (vitamin B6) biosynthetic enzyme" Validation Accuracy: 6/16 (37.50%) Validation Frequency class '40/16/0/0': 75/851 (8.81%) Evaluation on propertest data (1292 items): ytypl022w - 3,1,5,1 "RAD1" "component of the nucleotide excision repairosome" 40,10,0,0 "RAD1" "component of the nucleotide excision repairosome" ytydl174c 1,5,1,0 "DLD1" "D-lactate ferricytochrome C oxidoreductase (D-LCR)" 2,16,0,0 "DLD1" "D-lactate ferricytochrome C oxidoreductase (D-LCR)" 40,16,0,0 "DLD1" "D-lactate ferricytochrome C oxidoreductase (D-LCR)" ytyol067c - 1,5,4,0 "RTG1" "basic helix-loop-helix transcription factor that regulates CIT2 gene expression" 4,5,1,4 "RTG1" "basic helix-loop-helix transcription factor that regulates CIT2 gene expression" 40,10,0,0 "RTG1" "basic helix-loop-helix transcription factor that regulates CIT2 gene expression" ytyil070c 40,16,0,0 "MAM33" "mitochondrial acidic matrix protein" ytyhr008c 11,7,0,0 "SOD2" "superoxide dismutase (Mn) precursor, mitochondrial" 40,16,0,0 "SOD2" "superoxide dismutase (Mn) precursor, mitochondrial" ytylr439w 40,16,0,0 "MRPL4" "ribosomal protein, mitochondrial" 5,1,0,0 "MRPL4" "ribosomal protein, mitochondrial" ytypr124w - 13,1,1,1 "CTR1" "copper transport protein" 40,2,0,0 "CTR1" "copper transport protein" 67,4,1,1 "CTR1" "copper transport protein" 8,19,0,0 "CTR1" "copper transport protein" ytydr009w - 1,5,4,0 "GAL3" "galactokinase" 4,5,1,4 "GAL3" "galactokinase" ytyhl040c - 11,7,0,0 "ARN1" "ferrichrome-type siderophore transporter" 67,28,0,0 "ARN1" "ferrichrome-type siderophore transporter" ytylr395c 2,13,0,0 "COX8" "cytochrome-c oxidase chain VIII" 40,16,0,0 "COX8" "cytochrome-c oxidase chain VIII" ytyjl116c - 14,10,0,0 "NCA3" "involved in regulation of synthesis of ATP6P and Atp8p" ytybl030c 1,3,19,0 "PET9" "ADP/ATP carrier protein (MCF)" 40,16,0,0 "PET9" "ADP/ATP carrier protein (MCF)" 67,16,0,0 "PET9" "ADP/ATP carrier protein (MCF)" 8,4,0,0 "PET9" "ADP/ATP carrier protein (MCF)" ytydr298c 13,1,1,3 "ATP5" "F1F0-ATPase complex, OSCP subunit" 2,13,0,0 "ATP5" "F1F0-ATPase complex, OSCP subunit" 40,16,0,0 "ATP5" "F1F0-ATPase complex, OSCP subunit" 67,50,22,0 "ATP5" "F1F0-ATPase complex, OSCP subunit" 8,4,0,0 "ATP5" "F1F0-ATPase complex, OSCP subunit" ytyor017w 40,16,0,0 "PET127" "component of mitochondrial translation system" 5,7,0,0 "PET127" "component of mitochondrial translation system" ytycr010c - 1,5,4,0 "ADY2" "strong similarity to Y.lipolytica GPR1 protein and FUN34P" ytyhr001w-a 2,13,0,0 "QCR10" "ubiquinol--cytochrome-c reductase 8.5 kDa subunit" 40,16,0,0 "QCR10" "ubiquinol--cytochrome-c reductase 8.5 kDa subunit" ytykr016w - 2,13,0,0 "null" "weak similarity to mysoin heavy chain proteins" ytygl187c 2,13,0,0 "COX4" "cytochrome-c oxidase chain IV" 40,16,0,0 "COX4" "cytochrome-c oxidase chain IV" ytypl262w 2,10,0,0 "FUM1" "fumarate hydratase" 40,16,0,0 "FUM1" "fumarate hydratase" 40,3,0,0 "FUM1" "fumarate hydratase" ytydl087c - 4,5,5,1 "LUC7" "yeast U1 snRNP protein with a role in 5' splice site recognition" ytydl181w 2,99,0,0 "INH1" "inhibitor of mitochondrial ATPase" 40,16,0,0 "INH1" "inhibitor of mitochondrial ATPase" ytybr020w - 1,5,1,0 "GAL1" "galactokinase" 4,5,1,4 "GAL1" "galactokinase" 40,3,0,0 "GAL1" "galactokinase" ytybl099w 13,1,1,3 "ATP1" "F1F0-ATPase complex, F1 alpha subunit" 2,13,0,0 "ATP1" "F1F0-ATPase complex, F1 alpha subunit" 40,16,0,0 "ATP1" "F1F0-ATPase complex, F1 alpha subunit" 67,50,22,0 "ATP1" "F1F0-ATPase complex, F1 alpha subunit" 8,4,0,0 "ATP1" "F1F0-ATPase complex, F1 alpha subunit" ytylr038c 2,13,0,0 "COX12" "cytochrome-c oxidase, subunit VIB" 40,16,0,0 "COX12" "cytochrome-c oxidase, subunit VIB" 6,10,0,0 "COX12" "cytochrome-c oxidase, subunit VIB" ytyhr051w 2,13,0,0 "COX6" "cytochrome-c oxidase subunit VI" 40,16,0,0 "COX6" "cytochrome-c oxidase subunit VI" ytyel069c - 1,5,7,0 "HXT13" "high-affinity hexose transporter" 40,2,0,0 "HXT13" "high-affinity hexose transporter" 67,7,0,0 "HXT13" "high-affinity hexose transporter" 8,19,0,0 "HXT13" "high-affinity hexose transporter" ytyjl063c 40,16,0,0 "MRPL8" "ribosomal protein L17, mitochondrial" 5,1,0,0 "MRPL8" "ribosomal protein L17, mitochondrial" ytyfl060c - 11,1,0,0 "SNO3" "strong similarity to SNO1 and SNO2" ytybl045c 2,13,0,0 "COR1" "ubiquinol--cytochrome-c reductase 44K core protein" 40,16,0,0 "COR1" "ubiquinol--cytochrome-c reductase 44K core protein" ytydl215c - 1,1,10,0 "GDH2" "NAD-specific glutamate dehydrogenase (NAD)" 1,2,1,0 "GDH2" "NAD-specific glutamate dehydrogenase (NAD)" 40,3,0,0 "GDH2" "NAD-specific glutamate dehydrogenase (NAD)" ytypr193c - 3,1,9,5 "HPA2" "Histone and other Protein Acetyltransferase" 6,7,0,0 "HPA2" "Histone and other Protein Acetyltransferase" ytypr006c - 1,5,1,0 "ICL2" "non-functional isocitrate lyase" 2,22,0,0 "ICL2" "non-functional isocitrate lyase" ytypr020w 2,13,0,0 "ATP20" "subunit G of the dimeric form of mitochondrial F1F0-ATP Synthase" 40,16,0,0 "ATP20" "subunit G of the dimeric form of mitochondrial F1F0-ATP Synthase" ytykl109w - 4,5,1,4 "HAP4" "CCAAT-binding factor subunit" 40,10,0,0 "HAP4" "CCAAT-binding factor subunit" ytyhr096c - 1,5,7,0 "HXT5" "member of the hexose transporter family" 40,2,0,0 "HXT5" "member of the hexose transporter family" 67,7,0,0 "HXT5" "member of the hexose transporter family" 8,19,0,0 "HXT5" "member of the hexose transporter family" Propertest Accuracy: 18/35 (51.43%) Propertest Frequency class '40/16/0/0': 125/1292 (9.67%) New (unknown) data (851 items): ytylr294c - 99,0,0,0 "null" "questionable ORF" ytyfr017c - 99,0,0,0 "null" "hypothetical protein" ytyor382w - 99,0,0,0 "FIT2" "hypothetical protein" ytybr004c - 99,0,0,0 "null" "similarity to S.pombe hypothetical protein SPAC18B11.05" ytynl278w - 99,0,0,0 "CAF120" "similarity to YLR187w" ytydl089w - 99,0,0,0 "null" "weak similarity to hypothetical protein S. pombe" ytyil161w - 99,0,0,0 "null" "hypothetical protein" ytypr150w - 99,0,0,0 "null" "questionable ORF" ytypr151c - 99,0,0,0 "null" "weak similarity to YPL159c" ytyml089c - 99,0,0,0 "null" "questionable ORF" ytyjr080c - 99,0,0,0 "null" "hypothetical protein" ytydr070c - 99,0,0,0 "null" "hypothetical protein" ytygr290w - 99,0,0,0 "null" "hypothetical protein" ytycr006c - 99,0,0,0 "null" "hypothetical protein" ytymr136w - 99,0,0,0 "GAT2" "weak similarity to YIR013c and YLR013w" ytydl091c - 99,0,0,0 "null" "weak similarity to mouse FAF1 protein" ytypr123c - 99,0,0,0 "null" "questionable ORF" ytypl201c - 99,0,0,0 "null" "hypothetical protein" ytypl107w - 99,0,0,0 "null" "similarity to hypothetical protein SPCP31B10.02 S. pombe" ytyel057c - 99,0,0,0 "null" "hypothetical protein" ytygl146c - 99,0,0,0 "null" "hypothetical protein" ytydl121c - 99,0,0,0 "null" "hypothetical protein" ytydl222c - 99,0,0,0 "null" "strong similarity to hypothetical protein YNL194c and similarity to YML052w" ytynl319w - 99,0,0,0 "null" "questionable ORF" ytymr206w - 99,0,0,0 "null" "weak similarity to hypothetical protein YNR014w" ytypl185w - 99,0,0,0 "null" "questionable ORF" ytypr030w - 99,0,0,0 "CSR2" "similarity to YBL101c" ytynl195c - 99,0,0,0 "null" "hypothetical protein" ytypl110c - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein, weak similarity to PHO81P" ytydr544c - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytylr152c - 99,0,0,0 "null" "similarity to YOR3165w and YNL095c" ytypr002w - 99,0,0,0 "PDH1" "similarity to B.subtilis mmgE protein" ytykl107w - 99,0,0,0 "null" "weak similarity to S.antibioticus probable oxidoreductase" ytypl099c - 99,0,0,0 "null" "weak similarity to Sulfolobus hypothetical protein" ytyil050w - 98,0,0,0 "PCL7" "cyclin like protein interacting with PHO85P" ------------------ Rule 695: cellcycle_cdc15_200 <= 0.52 gasch1_Heat_Shock_000_minutes__hs_2 <= 0.97 gasch1_YP_raffinose_vs_reference_pool_car_2 > 0.66 -> class 40/16/0/0 "mitochondrion" Evaluation on training data (1638 items): ytyor306c - 67,99,0,0 "null" "similarity to human X-linked PEST-containing transporter" ytycl040w - 1,5,1,0 "GLK1" "aldohexose specific glucokinase" 1,5,7,0 "GLK1" "aldohexose specific glucokinase" 2,1,0,0 "GLK1" "aldohexose specific glucokinase" 40,3,0,0 "GLK1" "aldohexose specific glucokinase" 8,19,0,0 "GLK1" "aldohexose specific glucokinase" ytymr152w 40,16,0,0 "YIM1" "mitochondrial inner membrane protease" 6,7,0,0 "YIM1" "mitochondrial inner membrane protease" ytykl141w 2,13,0,0 "SDH3" "cytochrome b560 subunit of respiratory complex II" 40,16,0,0 "SDH3" "cytochrome b560 subunit of respiratory complex II" ytyol147c - 40,19,0,0 "PEX11" "peroxisomal membrane protein - peroxin" ytypl104w 40,16,0,0 "MSD1" "aspartate--tRNA ligase, mitochondrial" 5,10,0,0 "MSD1" "aspartate--tRNA ligase, mitochondrial" ytykl065c - 40,7,0,0 "YET1" "Yeast endoplasmic reticulum 25 kDa transmembrane protein" ytymr091c - 6,4,0,0 "NPL6" "nuclear protein localization factor" ytypl026c - 1,5,4,0 "SKS1" "suppressor kinase of SNF3" ytypr029c - 6,10,0,0 "APL4" "AP-1 complex subunit, gamma-adaptin, 94 KD" 8,19,0,0 "APL4" "AP-1 complex subunit, gamma-adaptin, 94 KD" ytyfr015c - 1,5,1,0 "GSY1" "UDP glucose--starch glucosyltransferase, isoform 1" 2,19,0,0 "GSY1" "UDP glucose--starch glucosyltransferase, isoform 1" 40,3,0,0 "GSY1" "UDP glucose--starch glucosyltransferase, isoform 1" ytyer072w - 14,1,3,99 "VTC1" "Negative Regulator of Cdc Fourty two (CDC42)" 40,30,0,0 "VTC1" "Negative Regulator of Cdc Fourty two (CDC42)" ytydr530c - 1,3,10,0 "APA2" "ATP adenylyltransferase II" ytydl004w 13,1,1,3 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 2,13,0,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 40,16,0,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 67,50,22,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" 8,4,0,0 "ATP16" "F1F0-ATPase complex, F1 delta subunit" ytykl148c 1,5,1,0 "SDH1" "succinate dehydrogenase flavoprotein precursor" 2,10,0,0 "SDH1" "succinate dehydrogenase flavoprotein precursor" 40,16,0,0 "SDH1" "succinate dehydrogenase flavoprotein precursor" ytykr085c 40,16,0,0 "MRPL20" "ribosomal protein YmL20, mitochondrial" 5,1,0,0 "MRPL20" "ribosomal protein YmL20, mitochondrial" ytypr125w - 4,5,5,1 "MRS7" "suppressor of MRS2-1 mutation" ytypl028w - 1,6,1,0 "ERG10" "acetyl-CoA C-acetyltransferase, cytosolic" 40,3,0,0 "ERG10" "acetyl-CoA C-acetyltransferase, cytosolic" ytyml078w 40,16,0,0 "CPR3" "cyclophilin (peptidylprolyl isomerase), mitochondrial" 6,1,0,0 "CPR3" "cyclophilin (peptidylprolyl isomerase), mitochondrial" ytypr047w 40,16,0,0 "MSF1" "phenylalanine--tRNA ligase alpha chain, mitochondrial" 5,10,0,0 "MSF1" "phenylalanine--tRNA ligase alpha chain, mitochondrial" 6,4,0,0 "MSF1" "phenylalanine--tRNA ligase alpha chain, mitochondrial" ytymr256c 2,13,0,0 "COX7" "cytochrome-c oxidase, subunit VII" 40,16,0,0 "COX7" "cytochrome-c oxidase, subunit VII" 6,10,0,0 "COX7" "cytochrome-c oxidase, subunit VII" ytyll027w - 13,1,1,1 "ISA1" "mitochondrial protein required for normal iron metabolism" 67,50,99,0 "ISA1" "mitochondrial protein required for normal iron metabolism" ytydl022w - 1,5,1,0 "GPD1" "glycerol-3-phosphate dehydrogenase (NAD+), cytoplasmic" 11,1,0,0 "GPD1" "glycerol-3-phosphate dehydrogenase (NAD+), cytoplasmic" 13,11,3,13 "GPD1" "glycerol-3-phosphate dehydrogenase (NAD+), cytoplasmic" 40,3,0,0 "GPD1" "glycerol-3-phosphate dehydrogenase (NAD+), cytoplasmic" ytyfl018c 1,1,1,0 "LPD1" "dihydrolipoamide dehydrogenase precursor" 2,10,0,0 "LPD1" "dihydrolipoamide dehydrogenase precursor" 40,16,0,0 "LPD1" "dihydrolipoamide dehydrogenase precursor" ytynl052w 2,13,0,0 "COX5A" "cytochrome-c oxidase chain V.A precursor" 40,16,0,0 "COX5A" "cytochrome-c oxidase chain V.A precursor" ytydl198c 40,16,0,0 "YHM1" "member of the mitochondrial carrier family (MCF)" 67,7,0,0 "YHM1" "member of the mitochondrial carrier family (MCF)" 8,4,0,0 "YHM1" "member of the mitochondrial carrier family (MCF)" ytyor187w 40,16,0,0 "TUF1" "translation elongation factor TU, mitochondrial" 5,4,0,0 "TUF1" "translation elongation factor TU, mitochondrial" ytylr142w 1,1,1,0 "PUT1" "proline oxidase" 1,1,10,0 "PUT1" "proline oxidase" 40,16,0,0 "PUT1" "proline oxidase" ytylr209c - 1,3,1,0 "PNP1" "strong similarity to purine-nucleoside phosphorylases" ytypl224c 13,1,1,1 "MMT2" "mitochondrial iron transporter" 40,16,0,0 "MMT2" "mitochondrial iron transporter" 67,4,1,2 "MMT2" "mitochondrial iron transporter" 8,4,0,0 "MMT2" "mitochondrial iron transporter" ytyhr047c - 1,5,4,0 "AAP1'" "alanine/arginine aminopeptidase" 2,19,0,0 "AAP1'" "alanine/arginine aminopeptidase" ytyll061w - 1,1,7,0 "MMP1" "high affinity S-methylmethionine permease" 67,10,0,0 "MMP1" "high affinity S-methylmethionine permease" ytyfr053c - 1,5,1,0 "HXK1" "hexokinase I" 2,1,0,0 "HXK1" "hexokinase I" 40,3,0,0 "HXK1" "hexokinase I" ytybr036c - 1,6,99,0 "CSG2" "calcium dependent regulatory protein" 40,7,0,0 "CSG2" "calcium dependent regulatory protein" ytylr160c - 1,1,10,0 "ASP3D" "L-asparaginase II" 40,1,0,0 "ASP3D" "L-asparaginase II" ytyor286w - 6,4,0,0 "null" "similarity to D.melanogaster heat shock protein 67B2" ytybr052c - 67,28,0,0 "null" "strong similarity to S.pombe brefeldin A resistance protein obr1" ytygr012w - 1,1,1,0 "null" "similarity to E.nidulans cysteine synthase" ytyir021w 4,5,5,1 "MRS1" "involved in mitochondrial RNA splicing of COB mRNA" 40,16,0,0 "MRS1" "involved in mitochondrial RNA splicing of COB mRNA" ytybr039w 13,1,1,3 "ATP3" "F1F0-ATPase complex, F1 gamma subunit" 2,13,0,0 "ATP3" "F1F0-ATPase complex, F1 gamma subunit" 40,16,0,0 "ATP3" "F1F0-ATPase complex, F1 gamma subunit" 67,50,22,0 "ATP3" "F1F0-ATPase complex, F1 gamma subunit" 8,4,0,0 "ATP3" "F1F0-ATPase complex, F1 gamma subunit" ytymr026c - 40,19,0,0 "PEX12" "required for biogenesis of peroxisomes - peroxin" ytyhr147c 40,16,0,0 "MRPL6" "ribosomal protein of the large subunit, mitochondrial" 5,1,0,0 "MRPL6" "ribosomal protein of the large subunit, mitochondrial" ytykl016c 13,1,1,3 "ATP7" "F1F0-ATPase complex, FO D subunit" 2,13,0,0 "ATP7" "F1F0-ATPase complex, FO D subunit" 40,16,0,0 "ATP7" "F1F0-ATPase complex, FO D subunit" 67,50,22,0 "ATP7" "F1F0-ATPase complex, FO D subunit" 8,4,0,0 "ATP7" "F1F0-ATPase complex, FO D subunit" ytyml120c 2,13,0,0 "NDI1" "NADH-ubiquinone-6 oxidoreductase" 40,16,0,0 "NDI1" "NADH-ubiquinone-6 oxidoreductase" ytypr183w - 1,5,1,0 "DPM1" "dolichyl-phosphate beta-D-mannosyltransferase" 40,7,0,0 "DPM1" "dolichyl-phosphate beta-D-mannosyltransferase" ytyor132w - 6,4,0,0 "VPS17" "vacuolar protein sorting-associated protein" ytylr327c - 6,10,0,0 "null" "strong similarity to STF2P" ytyml121w - 1,4,4,0 "GTR1" "GTP-binding protein" ytynl239w - 11,7,0,0 "LAP3" "member of the GAL regulon" 40,2,0,0 "LAP3" "member of the GAL regulon" 40,3,0,0 "LAP3" "member of the GAL regulon" 6,13,1,0 "LAP3" "member of the GAL regulon" ytynl334c - 11,1,0,0 "SNO2" "strong similarity to hypothetical proteins YFL060c and YMR095c" ytyel024w 2,13,0,0 "RIP1" "ubiquinol--cytochrome-c reductase iron-sulfur protein precursor" 40,16,0,0 "RIP1" "ubiquinol--cytochrome-c reductase iron-sulfur protein precursor" ytyor136w 1,5,1,0 "IDH2" "isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial" 2,10,0,0 "IDH2" "isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial" 4,99,0,0 "IDH2" "isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial" 40,16,0,0 "IDH2" "isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial" ytylr345w - 1,5,4,0 "null" "similarity to PFK26P and other 6-phosphofructo-2-kinases" 2,1,0,0 "null" "similarity to PFK26P and other 6-phosphofructo-2-kinases" ytymr303c - 1,5,1,0 "ADH2" "alcohol dehydrogenase II" 2,16,0,0 "ADH2" "alcohol dehydrogenase II" 40,3,0,0 "ADH2" "alcohol dehydrogenase II" ytydr405w 40,16,0,0 "MRP20" "ribosomal protein of the large subunit, mitochondrial" 5,1,0,0 "MRP20" "ribosomal protein of the large subunit, mitochondrial" ytyil109c - 40,7,0,0 "SEC24" "component of COPII coat of ER-Golgi vesicles" 40,8,0,0 "SEC24" "component of COPII coat of ER-Golgi vesicles" 40,9,0,0 "SEC24" "component of COPII coat of ER-Golgi vesicles" 8,7,0,0 "SEC24" "component of COPII coat of ER-Golgi vesicles" ytybr251w 40,16,0,0 "MRPS5" "ribosomal protein S5, mitochondrial" 5,1,0,0 "MRPS5" "ribosomal protein S5, mitochondrial" ytygr132c - 3,1,3,0 "PHB1" "prohibitin, antiproliferative protein" 3,3,1,0 "PHB1" "prohibitin, antiproliferative protein" ytygl115w - 1,5,4,0 "SNF4" "nuclear regulatory protein" 11,1,0,0 "SNF4" "nuclear regulatory protein" 4,5,1,4 "SNF4" "nuclear regulatory protein" 40,10,0,0 "SNF4" "nuclear regulatory protein" ytybr078w - 14,4,3,5 "ECM33" "involved in cell wall biogenesis and architecture" 3,3,2,0 "ECM33" "involved in cell wall biogenesis and architecture" 30,1,0,0 "ECM33" "involved in cell wall biogenesis and architecture" ytymr145c 2,13,0,0 "NDH1" "mitochondrial cytosolically directed NADH dehydrogenase" 40,16,0,0 "NDH1" "mitochondrial cytosolically directed NADH dehydrogenase" ytylr348c 1,4,7,0 "DIC1" "dicarboxylate carrier protein" 1,5,7,0 "DIC1" "dicarboxylate carrier protein" 40,16,0,0 "DIC1" "dicarboxylate carrier protein" 67,4,7,0 "DIC1" "dicarboxylate carrier protein" 67,7,0,0 "DIC1" "dicarboxylate carrier protein" 8,4,0,0 "DIC1" "dicarboxylate carrier protein" ytynl274c - 1,5,1,0 "null" "similarity to glycerate- and formate-dehydrogenases" ytydr343c - 1,5,7,0 "HXT6" "high-affinity hexose transporter" 40,2,0,0 "HXT6" "high-affinity hexose transporter" 67,7,0,0 "HXT6" "high-affinity hexose transporter" 8,19,0,0 "HXT6" "high-affinity hexose transporter" ytypr033c - 40,10,0,0 "HTS1" "histidine--tRNA ligase, mitochondrial" 40,3,0,0 "HTS1" "histidine--tRNA ligase, mitochondrial" 5,10,0,0 "HTS1" "histidine--tRNA ligase, mitochondrial" ytyll013c - 1,3,16,1 "PUF3" "transcript-specific regulator of mRNA degradation" ytykl150w 2,13,0,0 "MCR1" "cytochrome-b5 reductase" 40,16,0,0 "MCR1" "cytochrome-b5 reductase" ytypl031c - 1,4,4,0 "PHO85" "cyclin-dependent protein kinase" 1,5,4,0 "PHO85" "cyclin-dependent protein kinase" 2,19,0,0 "PHO85" "cyclin-dependent protein kinase" 3,3,1,0 "PHO85" "cyclin-dependent protein kinase" 4,5,1,4 "PHO85" "cyclin-dependent protein kinase" 40,10,0,0 "PHO85" "cyclin-dependent protein kinase" ytycl038c - 67,99,0,0 "null" "similarity to bacterial membrane transporter" ytyor092w - 30,1,0,0 "ECM3" "involved in cell wall biogenesis and architecture" ytyfl005w - 14,4,3,1 "SEC4" "GTP-binding protein of the ras superfamily" 40,2,0,0 "SEC4" "GTP-binding protein of the ras superfamily" 40,9,0,0 "SEC4" "GTP-binding protein of the ras superfamily" 8,7,0,0 "SEC4" "GTP-binding protein of the ras superfamily" ytyjr121w 13,1,1,3 "ATP2" "F1F0-ATPase complex, F1 beta subunit" 2,13,0,0 "ATP2" "F1F0-ATPase complex, F1 beta subunit" 40,16,0,0 "ATP2" "F1F0-ATPase complex, F1 beta subunit" 67,50,22,0 "ATP2" "F1F0-ATPase complex, F1 beta subunit" 8,4,0,0 "ATP2" "F1F0-ATPase complex, F1 beta subunit" ytykl170w 40,16,0,0 "MRPL38" "ribosomal protein of the large subunit (L14), mitochondrial" 5,1,0,0 "MRPL38" "ribosomal protein of the large subunit (L14), mitochondrial" ytymr262w - 3,3,1,0 "null" "similarity to S.pombe scn1 protein" ytypr054w - 10,1,99,0 "SMK1" "sporulation-specific MAP kinase" 14,4,3,5 "SMK1" "sporulation-specific MAP kinase" ytyor178c - 1,5,4,0 "GAC1" "ser/thr phosphoprotein phosphatase 1, regulatory chain" 2,19,0,0 "GAC1" "ser/thr phosphoprotein phosphatase 1, regulatory chain" 40,3,0,0 "GAC1" "ser/thr phosphoprotein phosphatase 1, regulatory chain" ytyll050c - 14,4,3,1 "COF1" "cofilin, actin binding and severing protein" 40,4,0,0 "COF1" "cofilin, actin binding and severing protein" 6,10,0,0 "COF1" "cofilin, actin binding and severing protein" 8,19,0,0 "COF1" "cofilin, actin binding and severing protein" ytyjr045c 11,1,0,0 "SSC1" "mitochondrial heat shock protein 70-related protein" 40,16,0,0 "SSC1" "mitochondrial heat shock protein 70-related protein" 6,1,0,0 "SSC1" "mitochondrial heat shock protein 70-related protein" 8,4,0,0 "SSC1" "mitochondrial heat shock protein 70-related protein" ytydr529c 2,13,0,0 "QCR7" "ubiquinol--cytochrome-c reductase subunit 7" 40,16,0,0 "QCR7" "ubiquinol--cytochrome-c reductase subunit 7" 6,10,0,0 "QCR7" "ubiquinol--cytochrome-c reductase subunit 7" ytymr267w 1,4,1,0 "PPA2" "inorganic pyrophosphatase, mitochondrial" 2,99,0,0 "PPA2" "inorganic pyrophosphatase, mitochondrial" 40,16,0,0 "PPA2" "inorganic pyrophosphatase, mitochondrial" ytykl003c 40,16,0,0 "MRP17" "ribosomal protein of the small subunit, mitochondrial" 5,1,0,0 "MRP17" "ribosomal protein of the small subunit, mitochondrial" ytyjr048w 2,13,0,0 "CYC1" "cytochrome-c isoform 1" 40,16,0,0 "CYC1" "cytochrome-c isoform 1" ytygr191w - 1,1,7,0 "HIP1" "histidine permease" 13,1,1,1 "HIP1" "histidine permease" 40,2,0,0 "HIP1" "histidine permease" 67,10,0,0 "HIP1" "histidine permease" 67,4,1,1 "HIP1" "histidine permease" 8,16,0,0 "HIP1" "histidine permease" 8,19,0,0 "HIP1" "histidine permease" ytydl210w - 1,2,1,0 "UGA4" "GABA-specific high-affinity permease" 40,2,0,0 "UGA4" "GABA-specific high-affinity permease" 67,10,0,0 "UGA4" "GABA-specific high-affinity permease" 8,19,0,0 "UGA4" "GABA-specific high-affinity permease" ytyhr057c - 11,1,0,0 "CYP2" "peptidyl-prolyl cis-trans isomerase" 40,7,0,0 "CYP2" "peptidyl-prolyl cis-trans isomerase" 6,1,0,0 "CYP2" "peptidyl-prolyl cis-trans isomerase" ytylr155c - 1,1,10,0 "ASP3A" "L-asparaginase II" 40,1,0,0 "ASP3A" "L-asparaginase II" ytyjl143w 40,16,0,0 "TIM17" "mitochondrial inner membrane import translocase subunit" 6,4,0,0 "TIM17" "mitochondrial inner membrane import translocase subunit" 67,99,0,0 "TIM17" "mitochondrial inner membrane import translocase subunit" 8,4,0,0 "TIM17" "mitochondrial inner membrane import translocase subunit" ytycr003w 40,16,0,0 "MRPL32" "ribosomal protein YmL32, mitochondrial" 5,1,0,0 "MRPL32" "ribosomal protein YmL32, mitochondrial" ytycr004c - 4,99,0,0 "YCP4" "strong similarity to S. pombe protein obr1" ytyor297c - 6,4,0,0 "TIM18" "component of the inner mitochondrial membrane translocation complex" ytypl172c 1,6,7,0 "COX10" "farnesyl transferase" 1,7,1,0 "COX10" "farnesyl transferase" 40,16,0,0 "COX10" "farnesyl transferase" 6,10,0,0 "COX10" "farnesyl transferase" ytyhr154w - 4,5,1,4 "ESC4" "Establishes Silent Chromatin" ytydr232w 1,7,1,0 "HEM1" "5-aminolevulinate synthase" 40,16,0,0 "HEM1" "5-aminolevulinate synthase" ytykr042w - 11,1,0,0 "UTH1" "involved in the aging process" 14,10,0,0 "UTH1" "involved in the aging process" 3,3,1,0 "UTH1" "involved in the aging process" ytydl217c 40,16,0,0 "TIM22" "subunit of the TIM22-complex" 6,4,0,0 "TIM22" "subunit of the TIM22-complex" 67,99,0,0 "TIM22" "subunit of the TIM22-complex" 8,4,0,0 "TIM22" "subunit of the TIM22-complex" ytypr004c 2,13,0,0 "null" "strong similarity to electron transfer flavoproteins alpha chain" 40,16,0,0 "null" "strong similarity to electron transfer flavoproteins alpha chain" ytypl271w 13,1,1,3 "ATP15" "F1F0-ATPase complex, F1 epsilon subunit" 2,13,0,0 "ATP15" "F1F0-ATPase complex, F1 epsilon subunit" 40,16,0,0 "ATP15" "F1F0-ATPase complex, F1 epsilon subunit" 67,50,22,0 "ATP15" "F1F0-ATPase complex, F1 epsilon subunit" 8,4,0,0 "ATP15" "F1F0-ATPase complex, F1 epsilon subunit" ytymr054w - 13,1,1,3 "STV1" "H+-ATPase V0 domain 102 KD subunit, not vacuolar" 40,3,0,0 "STV1" "H+-ATPase V0 domain 102 KD subunit, not vacuolar" 40,8,0,0 "STV1" "H+-ATPase V0 domain 102 KD subunit, not vacuolar" 67,4,1,2 "STV1" "H+-ATPase V0 domain 102 KD subunit, not vacuolar" 67,50,22,0 "STV1" "H+-ATPase V0 domain 102 KD subunit, not vacuolar" 8,13,0,0 "STV1" "H+-ATPase V0 domain 102 KD subunit, not vacuolar" ytynl169c 1,6,1,0 "PSD1" "phosphatidylserine decarboxylase 1" 40,16,0,0 "PSD1" "phosphatidylserine decarboxylase 1" ytydr077w - 11,1,0,0 "SED1" "abundant cell surface glycoprotein" 40,2,0,0 "SED1" "abundant cell surface glycoprotein" ytylr259c 11,1,0,0 "HSP60" "heat shock protein - chaperone, mitochondrial" 40,16,0,0 "HSP60" "heat shock protein - chaperone, mitochondrial" 6,1,0,0 "HSP60" "heat shock protein - chaperone, mitochondrial" ytyml054c 1,5,1,0 "CYB2" "lactate dehydrogenase cytochrome b2" 2,13,0,0 "CYB2" "lactate dehydrogenase cytochrome b2" 40,16,0,0 "CYB2" "lactate dehydrogenase cytochrome b2" Training Accuracy: 44/102 (43.14%) Training Frequency class '40/16/0/0': 140/1638 (8.55%) Evaluation on validation data (851 items): ytymr064w - 4,99,0,0 "AEP1" "nuclear control of ATPase messenger RNA expression protein" 5,7,0,0 "AEP1" "nuclear control of ATPase messenger RNA expression protein" ytymr059w - 4,3,3,0 "SEN15" "tRNA splicing endonuclease delta subunit" 40,10,0,0 "SEN15" "tRNA splicing endonuclease delta subunit" ytylr110c - 30,1,0,0 "CCW12" "strong similarity to FLO1P" ytymr307w - 1,6,99,0 "GAS1" "glycophospholipid-anchored surface glycoprotein" 30,1,0,0 "GAS1" "glycophospholipid-anchored surface glycoprotein" 40,2,0,0 "GAS1" "glycophospholipid-anchored surface glycoprotein" ytymr228w 3,1,5,0 "MTF1" "RNA polymerase specific factor, mitochondrial" 4,5,1,1 "MTF1" "RNA polymerase specific factor, mitochondrial" 40,16,0,0 "MTF1" "RNA polymerase specific factor, mitochondrial" ytyor317w - 1,6,1,0 "FAA1" "long-chain-fatty-acid--CoA ligase" 1,6,7,0 "FAA1" "long-chain-fatty-acid--CoA ligase" ytydr178w 1,5,1,0 "SDH4" "succinate dehydrogenase membrane anchor subunit for SDH2P" 2,10,0,0 "SDH4" "succinate dehydrogenase membrane anchor subunit for SDH2P" 2,13,0,0 "SDH4" "succinate dehydrogenase membrane anchor subunit for SDH2P" 40,16,0,0 "SDH4" "succinate dehydrogenase membrane anchor subunit for SDH2P" ytynr019w - 1,6,1,0 "ARE2" "acyl-CoA sterol acyltransferase" 14,4,3,5 "ARE2" "acyl-CoA sterol acyltransferase" ytypr028w - 8,7,0,0 "YIP2" "Ypt-interacting protein" ytyor158w 40,16,0,0 "PET123" "ribosomal protein, mitochondrial" 5,1,0,0 "PET123" "ribosomal protein, mitochondrial" ytypl019c - 8,13,0,0 "VTC3" "strong similarity to YFL004w, similarity to YJL012c" ytyll009c 13,1,1,1 "COX17" "interacts genetically with SCO1 and SCO2 in cytochrome oxidase assembly" 2,13,0,0 "COX17" "interacts genetically with SCO1 and SCO2 in cytochrome oxidase assembly" 40,16,0,0 "COX17" "interacts genetically with SCO1 and SCO2 in cytochrome oxidase assembly" 40,3,0,0 "COX17" "interacts genetically with SCO1 and SCO2 in cytochrome oxidase assembly" 6,10,0,0 "COX17" "interacts genetically with SCO1 and SCO2 in cytochrome oxidase assembly" ytykl146w - 67,99,0,0 "null" "strong similarity to S.pombe hypothetical protein C3H1.09C" ytykr076w - 30,1,0,0 "ECM4" "involved in cell wall biogenesis and architecture" ytyor247w - 11,7,0,0 "SRL1" "similarity to vanadate sensitive suppressor SVS1P" ytylr390w - 30,1,0,0 "ECM19" "involved in cell wall biogenesis and architecture" ytylr043c - 11,7,0,0 "TRX1" "thioredoxin I" 3,3,1,0 "TRX1" "thioredoxin I" 6,7,0,0 "TRX1" "thioredoxin I" ytypl037c - 1,5,4,0 "EGD1" "GAL4 DNA-binding enhancer protein" 4,5,1,4 "EGD1" "GAL4 DNA-binding enhancer protein" 40,10,0,0 "EGD1" "GAL4 DNA-binding enhancer protein" 6,4,0,0 "EGD1" "GAL4 DNA-binding enhancer protein" ytyfr033c 2,13,0,0 "QCR6" "ubiquinol--cytochrome-c reductase 17K protein" 40,16,0,0 "QCR6" "ubiquinol--cytochrome-c reductase 17K protein" ytyor185c - 4,7,0,0 "GSP2" "GTP-binding protein of the RAS superfamily" 40,10,0,0 "GSP2" "GTP-binding protein of the RAS superfamily" 40,3,0,0 "GSP2" "GTP-binding protein of the RAS superfamily" 8,1,0,0 "GSP2" "GTP-binding protein of the RAS superfamily" ytypl118w 40,16,0,0 "MRP51" "mitochondrial ribosomal protein of the small subunit" 5,1,0,0 "MRP51" "mitochondrial ribosomal protein of the small subunit" ytygl068w 40,16,0,0 "null" "strong similarity to Cricetus mitochrondial ribosomal L12 protein" 5,1,0,0 "null" "strong similarity to Cricetus mitochrondial ribosomal L12 protein" ytyjr117w - 14,4,3,3 "STE24" "zinc metallo-protease" 40,7,0,0 "STE24" "zinc metallo-protease" 6,7,0,0 "STE24" "zinc metallo-protease" ytyhr117w 40,16,0,0 "TOM71" "protein with similarity to TOM70P/Mas70p" 8,4,0,0 "TOM71" "protein with similarity to TOM70P/Mas70p" ytynl134c - 40,3,0,0 "null" "similarity to C.carbonum toxD gene" ytyol011w - 1,6,4,0 "PLB3" "phospholipase B (lysophospholipase)" ytykl176c - 6,4,0,0 "LST4" "protein required for regulated transport of nitrogen-regulated permeases from the Golgi to the plasma membrane" ytylr304c 1,5,1,0 "ACO1" "aconitate hydratase" 2,10,0,0 "ACO1" "aconitate hydratase" 2,22,0,0 "ACO1" "aconitate hydratase" 40,16,0,0 "ACO1" "aconitate hydratase" 40,3,0,0 "ACO1" "aconitate hydratase" ytykr006c 40,16,0,0 "MRPL13" "ribosomal protein YmL13, mitochondrial" 5,1,0,0 "MRPL13" "ribosomal protein YmL13, mitochondrial" ytyjl221c - 1,5,1,0 "FSP2" "strong similarity to alpha-D-glucosidase" 2,19,0,0 "FSP2" "strong similarity to alpha-D-glucosidase" ytynl137c 40,16,0,0 "NAM9" "ribosomal protein, mitochondrial" 5,1,0,0 "NAM9" "ribosomal protein, mitochondrial" ytyor285w - 6,4,0,0 "null" "similarity to D.melanogaster heat shock protein 67B2" ytygl248w - 1,3,13,0 "PDE1" "low affinity 3',5'-cyclic-nucleotide phosphodiesterase" 40,3,0,0 "PDE1" "low affinity 3',5'-cyclic-nucleotide phosphodiesterase" ytybr132c - 1,1,7,0 "AGP2" "amino-acid permease" 67,10,0,0 "AGP2" "amino-acid permease" ytynl312w - 3,1,3,0 "RFA2" "DNA replication factor A, 36 kDa subunit" 40,10,0,0 "RFA2" "DNA replication factor A, 36 kDa subunit" ytynl145w - 14,4,3,3 "MFA2" "mating pheromone a-factor 2" 40,27,0,0 "MFA2" "mating pheromone a-factor 2" ytynl138w - 10,1,99,0 "SRV2" "adenylate cyclase-associated protein, 70kDa" 14,1,0,0 "SRV2" "adenylate cyclase-associated protein, 70kDa" 14,4,3,1 "SRV2" "adenylate cyclase-associated protein, 70kDa" 40,4,0,0 "SRV2" "adenylate cyclase-associated protein, 70kDa" ytypr166c 40,16,0,0 "MRP2" "ribosomal protein S14" 5,1,0,0 "MRP2" "ribosomal protein S14" ytylr069c 40,16,0,0 "MEF1" "translation elongation factor G, mitochondrial" 5,4,2,0 "MEF1" "translation elongation factor G, mitochondrial" ytygr189c - 40,1,0,0 "CRH1" "family of putative glycosidases might exert a common role in cell wall organization" ytyer101c - 6,4,0,0 "AST2" "involved in targeting of plasma membrane [H+]ATPase" ytyar002c-a - 6,4,0,0 "ERP1" "p24 protein involved in membrane trafficking" 8,7,0,0 "ERP1" "p24 protein involved in membrane trafficking" ytypl078c 13,1,1,3 "ATP4" "F1F0-ATPase complex, F0 subunit B" 2,13,0,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" 40,16,0,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" 67,50,22,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" 8,4,0,0 "ATP4" "F1F0-ATPase complex, F0 subunit B" ytymr035w 3,1,5,1 "IMP2" "mitochondrial inner membrane protease subunit" 40,16,0,0 "IMP2" "mitochondrial inner membrane protease subunit" 6,4,0,0 "IMP2" "mitochondrial inner membrane protease subunit" 6,7,0,0 "IMP2" "mitochondrial inner membrane protease subunit" ytyjr077c 1,4,7,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 13,1,3,3 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 40,16,0,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 67,4,7,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" 8,4,0,0 "MIR1" "phosphate transport protein, mitochondrial (MCF)" ytynr001c 1,5,1,0 "CIT1" "citrate (si)-synthase, mitochondrial" 2,10,0,0 "CIT1" "citrate (si)-synthase, mitochondrial" 40,16,0,0 "CIT1" "citrate (si)-synthase, mitochondrial" ytyor045w 40,16,0,0 "TOM6" "mitochondrial outer membrane import receptor subunit, 6 kD" 6,4,0,0 "TOM6" "mitochondrial outer membrane import receptor subunit, 6 kD" 67,99,0,0 "TOM6" "mitochondrial outer membrane import receptor subunit, 6 kD" 8,4,0,0 "TOM6" "mitochondrial outer membrane import receptor subunit, 6 kD" ytypr191w 2,13,0,0 "QCR2" "ubiquinol--cytochrome-c reductase 40KD chain II" 40,16,0,0 "QCR2" "ubiquinol--cytochrome-c reductase 40KD chain II" 6,10,0,0 "QCR2" "ubiquinol--cytochrome-c reductase 40KD chain II" ytynl333w - 1,7,1,0 "SNZ2" "putative pyridoxine (vitamin B6) biosynthetic enzyme" 11,1,0,0 "SNZ2" "putative pyridoxine (vitamin B6) biosynthetic enzyme" ytydr148c 1,5,1,0 "KGD2" "2-oxoglutarate dehydrogenase complex E2 component" 2,10,0,0 "KGD2" "2-oxoglutarate dehydrogenase complex E2 component" 40,16,0,0 "KGD2" "2-oxoglutarate dehydrogenase complex E2 component" ytybr234c - 14,1,0,0 "ARC40" "ARP2/3 protein complex subunit, 40 kilodalton" 14,4,3,1 "ARC40" "ARP2/3 protein complex subunit, 40 kilodalton" 40,4,0,0 "ARC40" "ARP2/3 protein complex subunit, 40 kilodalton" ytyer026c 1,6,1,0 "CHO1" "CDP-diacylglycerol serine O-phosphatidyltransferase" 40,16,0,0 "CHO1" "CDP-diacylglycerol serine O-phosphatidyltransferase" 40,7,0,0 "CHO1" "CDP-diacylglycerol serine O-phosphatidyltransferase" 40,99,0,0 "CHO1" "CDP-diacylglycerol serine O-phosphatidyltransferase" ytygr289c - 1,5,7,0 "MAL11" "general alpha-glucoside permease" 67,7,0,0 "MAL11" "general alpha-glucoside permease" ytyor142w - 1,5,1,0 "LSC1" "succinate-CoA ligase alpha subunit" 2,10,0,0 "LSC1" "succinate-CoA ligase alpha subunit" ytyjl180c 40,16,0,0 "ATP12" "F1F0-ATPase complex assembly protein" 6,10,0,0 "ATP12" "F1F0-ATPase complex assembly protein" ytymr302c 4,1,99,0 "PRP12" "involved in early maturation of pre-rRNA" 40,16,0,0 "PRP12" "involved in early maturation of pre-rRNA" ytyjl166w 2,13,0,0 "QCR8" "ubiquinol--cytochrome-c reductase chain VIII" 40,16,0,0 "QCR8" "ubiquinol--cytochrome-c reductase chain VIII" ytyll001w 40,16,0,0 "DNM1" "dynamin-related protein" ytyol135c - 4,5,1,4 "MED7" "member of RNA Polymerase II transcriptional regulation mediator complex" 40,10,0,0 "MED7" "member of RNA Polymerase II transcriptional regulation mediator complex" Validation Accuracy: 25/59 (42.37%) Validation Frequency class '40/16/0/0': 75/851 (8.81%) Evaluation on propertest data (1292 items): ytylr354c - 1,5,1,0 "TAL1" "transaldolase" 2,7,0,0 "TAL1" "transaldolase" 40,3,0,0 "TAL1" "transaldolase" ytypr024w 40,16,0,0 "YME1" "protease of the SEC18/CDC48/PAS1 family of ATPases (AAA)" 6,10,0,0 "YME1" "protease of the SEC18/CDC48/PAS1 family of ATPases (AAA)" 6,13,99,0 "YME1" "protease of the SEC18/CDC48/PAS1 family of ATPases (AAA)" ytyol145c - 3,3,1,0 "CTR9" "required for G1 cyclin expression" 40,4,0,0 "CTR9" "required for G1 cyclin expression" ytylr356w - 3,3,1,0 "null" "similarity to SCM4 protein" ytyor149c - 14,1,3,99 "SMP3" "protein kinase C pathway protein" 14,4,3,1 "SMP3" "protein kinase C pathway protein" 3,3,1,0 "SMP3" "protein kinase C pathway protein" ytylr371w - 1,5,4,0 "ROM2" "GDP/GTP exchange factor for RHO1P" 14,1,3,0 "ROM2" "GDP/GTP exchange factor for RHO1P" 14,4,3,1 "ROM2" "GDP/GTP exchange factor for RHO1P" 14,4,3,3 "ROM2" "GDP/GTP exchange factor for RHO1P" 30,1,0,0 "ROM2" "GDP/GTP exchange factor for RHO1P" 30,4,0,0 "ROM2" "GDP/GTP exchange factor for RHO1P" 62,2,5,0 "ROM2" "GDP/GTP exchange factor for RHO1P" ytycr046c 2,13,0,0 "IMG1" "ribosomal protein, mitochondrial" 40,16,0,0 "IMG1" "ribosomal protein, mitochondrial" 5,1,0,0 "IMG1" "ribosomal protein, mitochondrial" ytynl284c 40,16,0,0 "MRPL10" "ribosomal protein of the large subunit, mitochondrial" 5,1,0,0 "MRPL10" "ribosomal protein of the large subunit, mitochondrial" ytyil070c 40,16,0,0 "MAM33" "mitochondrial acidic matrix protein" ytylr439w 40,16,0,0 "MRPL4" "ribosomal protein, mitochondrial" 5,1,0,0 "MRPL4" "ribosomal protein, mitochondrial" ytygl062w - 1,5,1,0 "PYC1" "pyruvate carboxylase 1" 2,1,0,0 "PYC1" "pyruvate carboxylase 1" 40,3,0,0 "PYC1" "pyruvate carboxylase 1" ytyor327c - 40,9,0,0 "SNC2" "synaptobrevin (v-SNARE) homolog present on post-Golgi vesicles" 6,4,0,0 "SNC2" "synaptobrevin (v-SNARE) homolog present on post-Golgi vesicles" 8,7,0,0 "SNC2" "synaptobrevin (v-SNARE) homolog present on post-Golgi vesicles" ytyjr113c 40,16,0,0 "RSM7" "similarity to bacterial, chloroplast and mitochondrial ribosomal protein S7" 5,1,0,0 "RSM7" "similarity to bacterial, chloroplast and mitochondrial ribosomal protein S7" ytyjr019c - 1,6,4,0 "TES1" "thioesterase, peroxisomal" 40,19,0,0 "TES1" "thioesterase, peroxisomal" ytykl067w - 1,3,99,0 "YNK1" "nucleoside diphosphate kinase" 40,3,0,0 "YNK1" "nucleoside diphosphate kinase" ytydr516c - 1,5,1,0 "null" "strong similarity to glucokinase" ytyfr030w - 1,1,1,0 "MET10" "sulfite reductase flavin-binding subunit" 1,2,1,0 "MET10" "sulfite reductase flavin-binding subunit" ytyml091c 4,3,3,0 "RPM2" "ribonuclease P precursor, mitochondrial" 40,16,0,0 "RPM2" "ribonuclease P precursor, mitochondrial" ytylr203c 40,16,0,0 "MSS51" "possibly involved in translational activation of COX1 and COB mRNA" 5,7,0,0 "MSS51" "possibly involved in translational activation of COX1 and COB mRNA" ytyll041c 2,10,0,0 "SDH2" "succinate dehydrogenase iron-sulfur protein subunit" 40,16,0,0 "SDH2" "succinate dehydrogenase iron-sulfur protein subunit" ytylr395c 2,13,0,0 "COX8" "cytochrome-c oxidase chain VIII" 40,16,0,0 "COX8" "cytochrome-c oxidase chain VIII" ytybl030c 1,3,19,0 "PET9" "ADP/ATP carrier protein (MCF)" 40,16,0,0 "PET9" "ADP/ATP carrier protein (MCF)" 67,16,0,0 "PET9" "ADP/ATP carrier protein (MCF)" 8,4,0,0 "PET9" "ADP/ATP carrier protein (MCF)" ytynl055c 40,16,0,0 "POR1" "mitochondrial outer membrane porin" 67,99,0,0 "POR1" "mitochondrial outer membrane porin" 8,4,0,0 "POR1" "mitochondrial outer membrane porin" ytydr298c 13,1,1,3 "ATP5" "F1F0-ATPase complex, OSCP subunit" 2,13,0,0 "ATP5" "F1F0-ATPase complex, OSCP subunit" 40,16,0,0 "ATP5" "F1F0-ATPase complex, OSCP subunit" 67,50,22,0 "ATP5" "F1F0-ATPase complex, OSCP subunit" 8,4,0,0 "ATP5" "F1F0-ATPase complex, OSCP subunit" ytyhr063c - 1,7,1,0 "PAN5" "weak similarity to translational activator CBS2" ytymr024w 40,16,0,0 "MRPL3" "ribosomal protein of the large subunit, mitochondrial" 5,1,0,0 "MRPL3" "ribosomal protein of the large subunit, mitochondrial" ytyor367w - 30,4,0,0 "SCP1" "similarity to mammalian smooth muscle protein SM22 and chicken calponin alpha" ytyer178w 1,5,1,0 "PDA1" "pyruvate dehydrogenase (lipoamide) alpha chain precursor" 2,1,0,0 "PDA1" "pyruvate dehydrogenase (lipoamide) alpha chain precursor" 40,16,0,0 "PDA1" "pyruvate dehydrogenase (lipoamide) alpha chain precursor" ytykr016w - 2,13,0,0 "null" "weak similarity to mysoin heavy chain proteins" ytylr163c 40,16,0,0 "MAS1" "mitochondrial processing peptidase" 6,7,0,0 "MAS1" "mitochondrial processing peptidase" ytygr014w - 14,4,3,1 "MSB2" "multicopy suppressor of a CDC24 bud emergence defect" 40,2,0,0 "MSB2" "multicopy suppressor of a CDC24 bud emergence defect" ytydl206w - 67,99,0,0 "null" "weak similarity to transporter proteins" ytyor130c 1,1,7,0 "ORT1" "ornithine transport protein of mitochondria involved in arginine metabolism, member of the mitochondrial carrier family (MCF)" 40,16,0,0 "ORT1" "ornithine transport protein of mitochondria involved in arginine metabolism, member of the mitochondrial carrier family (MCF)" 67,10,0,0 "ORT1" "ornithine transport protein of mitochondria involved in arginine metabolism, member of the mitochondrial carrier family (MCF)" 8,4,0,0 "ORT1" "ornithine transport protein of mitochondria involved in arginine metabolism, member of the mitochondrial carrier family (MCF)" ytylr085c - 40,4,0,0 "ARP6" "Actin-related protein" ytynl076w - 1,3,13,0 "MKS1" "pleiotropic regulatory factor" 1,5,4,0 "MKS1" "pleiotropic regulatory factor" 30,1,0,0 "MKS1" "pleiotropic regulatory factor" 4,5,1,4 "MKS1" "pleiotropic regulatory factor" ytybr056w - 1,5,1,0 "null" "similarity to glucan 1,3-beta-glucosidase" ytydl208w - 4,1,4,0 "NHP2" "nucleolar rRNA processing protein" 40,10,0,0 "NHP2" "nucleolar rRNA processing protein" ytynl252c 40,16,0,0 "MRPL17" "ribosomal protein of the large subunit (YmL30), mitochondrial" 5,1,0,0 "MRPL17" "ribosomal protein of the large subunit (YmL30), mitochondrial" ytyor038c - 4,5,1,4 "HIR2" "histone transcription regulator" 40,10,0,0 "HIR2" "histone transcription regulator" ytygr287c - 1,5,1,0 "null" "strong similarity to maltase" ytypl087w - 1,6,0,0 "YDC1" "alkaline dihydroceramidase" ytypr011c - 1,3,19,0 "null" "similarity to ADP/ATP carrier proteins and Graves disease carrier protein" 67,16,0,0 "null" "similarity to ADP/ATP carrier proteins and Graves disease carrier protein" 8,4,0,0 "null" "similarity to ADP/ATP carrier proteins and Graves disease carrier protein" ytylr248w - 2,13,0,0 "RCK2" "Ca/calmodulin-dependent ser/thr protein kinase" 3,3,1,0 "RCK2" "Ca/calmodulin-dependent ser/thr protein kinase" 40,3,0,0 "RCK2" "Ca/calmodulin-dependent ser/thr protein kinase" ytydr322w 40,16,0,0 "MRPL35" "ribosomal protein YmL35 of the large subunit, mitochondrial" 5,1,0,0 "MRPL35" "ribosomal protein YmL35 of the large subunit, mitochondrial" ytylr287c-a - 40,3,0,0 "RPS30A" "40S small subunit ribosomal protein" 5,1,0,0 "RPS30A" "40S small subunit ribosomal protein" ytyml109w - 14,4,3,1 "ZDS2" "multicopy suppressor of SIN4" 3,3,1,0 "ZDS2" "multicopy suppressor of SIN4" ytyor230w - 4,99,0,0 "WTM1" "transcriptional modulator" 40,10,0,0 "WTM1" "transcriptional modulator" ytyjl159w - 11,1,0,0 "HSP150" "member of the PIR1P/HSP150P/PIR3P family" 14,4,3,1 "HSP150" "member of the PIR1P/HSP150P/PIR3P family" 40,1,0,0 "HSP150" "member of the PIR1P/HSP150P/PIR3P family" 40,27,0,0 "HSP150" "member of the PIR1P/HSP150P/PIR3P family" ytyjl174w - 1,5,1,0 "KRE9" "cell wall synthesis protein" 14,1,0,0 "KRE9" "cell wall synthesis protein" 14,4,3,1 "KRE9" "cell wall synthesis protein" 14,4,3,3 "KRE9" "cell wall synthesis protein" 40,27,0,0 "KRE9" "cell wall synthesis protein" ytyor232w 40,16,0,0 "MGE1" "heat shock protein - chaperone" 6,1,0,0 "MGE1" "heat shock protein - chaperone" 8,4,0,0 "MGE1" "heat shock protein - chaperone" ytyor313c - 14,4,3,5 "SPS4" "sporulation-specific protein" ytybr158w - 40,10,3,0 "CST13" "weak similarity to TRCDSEMBL:AF176518_1 F-box protein FBL2; human" ytymr225c 40,16,0,0 "MRPL44" "ribosomal protein YMR44, mitochondrial" 5,1,0,0 "MRPL44" "ribosomal protein YMR44, mitochondrial" ytydr502c - 1,1,10,0 "SAM2" "S-adenosylmethionine synthetase 2" ytydr342c - 1,5,7,0 "HXT7" "high-affinity hexose transporter" 40,2,0,0 "HXT7" "high-affinity hexose transporter" 67,7,0,0 "HXT7" "high-affinity hexose transporter" 8,19,0,0 "HXT7" "high-affinity hexose transporter" ytynl006w - 8,7,0,0 "LST8" "required for transport of permeases from the golgi to the plasma membrane" ytykl135c - 40,9,0,0 "APL2" "AP-1 complex subunit, beta1-adaptin, 82 KD" 6,10,0,0 "APL2" "AP-1 complex subunit, beta1-adaptin, 82 KD" 8,19,0,0 "APL2" "AP-1 complex subunit, beta1-adaptin, 82 KD" ytyjl004c - 8,7,0,0 "SYS1" "multi copy suppressor of YPT6" ytydl181w 2,99,0,0 "INH1" "inhibitor of mitochondrial ATPase" 40,16,0,0 "INH1" "inhibitor of mitochondrial ATPase" ytymr243c - 11,7,0,0 "ZRC1" "zinc- and cadmium resistance protein" 13,1,1,1 "ZRC1" "zinc- and cadmium resistance protein" 40,2,0,0 "ZRC1" "zinc- and cadmium resistance protein" 67,4,1,1 "ZRC1" "zinc- and cadmium resistance protein" 8,19,0,0 "ZRC1" "zinc- and cadmium resistance protein" ytyjl006c - 4,5,1,4 "CTK2" "carboxy-terminal domain (CTD) kinase, beta subunit" 40,10,0,0 "CTK2" "carboxy-terminal domain (CTD) kinase, beta subunit" ytynr041c 1,7,1,0 "COQ2" "para-hydroxybenzoate--polyprenyltransferase" 40,16,0,0 "COQ2" "para-hydroxybenzoate--polyprenyltransferase" ytylr367w - 40,3,0,0 "RPS22B" "ribosomal protein S15a.e.c12" 5,1,0,0 "RPS22B" "ribosomal protein S15a.e.c12" ytypr036w - 13,1,1,3 "VMA13" "H+-ATPase V1 domain 54 KD subunit, vacuolar" 40,25,0,0 "VMA13" "H+-ATPase V1 domain 54 KD subunit, vacuolar" 67,4,1,2 "VMA13" "H+-ATPase V1 domain 54 KD subunit, vacuolar" 67,50,22,0 "VMA13" "H+-ATPase V1 domain 54 KD subunit, vacuolar" 8,13,0,0 "VMA13" "H+-ATPase V1 domain 54 KD subunit, vacuolar" ytypr037c 40,16,0,0 "ERV2" "similarity to ERV1P and rat ALR protein" ytygl071w - 13,1,1,1 "RCS1" "iron-regulated transcriptional repressor" 4,5,1,4 "RCS1" "iron-regulated transcriptional repressor" 40,10,0,0 "RCS1" "iron-regulated transcriptional repressor" ytyjl197w - 6,13,1,0 "UBP12" "ubiquitin C-terminal hydrolase" ytylr289w - 5,4,0,0 "GUF1" "strong similarity to E. coli elongation factor-type GTP-binding protein lepa" ytynl202w - 2,25,0,0 "SPS19" "peroxisomal 2,4-dienoyl-CoA reductase" 40,19,0,0 "SPS19" "peroxisomal 2,4-dienoyl-CoA reductase" ytybl099w 13,1,1,3 "ATP1" "F1F0-ATPase complex, F1 alpha subunit" 2,13,0,0 "ATP1" "F1F0-ATPase complex, F1 alpha subunit" 40,16,0,0 "ATP1" "F1F0-ATPase complex, F1 alpha subunit" 67,50,22,0 "ATP1" "F1F0-ATPase complex, F1 alpha subunit" 8,4,0,0 "ATP1" "F1F0-ATPase complex, F1 alpha subunit" ytymr089c 2,13,0,0 "YTA12" "protease of the SEC18/CDC48/PAS1 family of ATPases (AAA)" 40,16,0,0 "YTA12" "protease of the SEC18/CDC48/PAS1 family of ATPases (AAA)" 6,10,0,0 "YTA12" "protease of the SEC18/CDC48/PAS1 family of ATPases (AAA)" 6,13,99,0 "YTA12" "protease of the SEC18/CDC48/PAS1 family of ATPases (AAA)" ytykl157w - 1,1,99,0 "APE2" "aminopeptidase yscII" 40,27,0,0 "APE2" "aminopeptidase yscII" 6,7,0,0 "APE2" "aminopeptidase yscII" ytylr038c 2,13,0,0 "COX12" "cytochrome-c oxidase, subunit VIB" 40,16,0,0 "COX12" "cytochrome-c oxidase, subunit VIB" 6,10,0,0 "COX12" "cytochrome-c oxidase, subunit VIB" ytynl045w - 1,6,1,0 "null" "strong similarity to human leukotriene-A4 hydrolase" ytyhr051w 2,13,0,0 "COX6" "cytochrome-c oxidase subunit VI" 40,16,0,0 "COX6" "cytochrome-c oxidase subunit VI" ytyhr005c-a 30,16,0,0 "MRS11" "subunit of the TIM22-complex" 40,16,0,0 "MRS11" "subunit of the TIM22-complex" 6,4,0,0 "MRS11" "subunit of the TIM22-complex" 8,4,0,0 "MRS11" "subunit of the TIM22-complex" ytybr296c - 1,4,7,0 "PHO89" "Na+-coupled phosphate transport protein, high affinity" 13,1,1,99 "PHO89" "Na+-coupled phosphate transport protein, high affinity" 13,1,3,3 "PHO89" "Na+-coupled phosphate transport protein, high affinity" 67,4,7,0 "PHO89" "Na+-coupled phosphate transport protein, high affinity" ytyol020w - 1,1,7,0 "TAT2" "high affinity tryptophan transport protein" 40,2,0,0 "TAT2" "high affinity tryptophan transport protein" 67,10,0,0 "TAT2" "high affinity tryptophan transport protein" 8,19,0,0 "TAT2" "high affinity tryptophan transport protein" ytypr155c - 30,16,0,0 "NCA2" "control of mitochondrial synthesis of ATP6P and Atp8p" ytykl192c 1,6,1,0 "ACP1" "mitochonrial acyl-carrier protein" 40,16,0,0 "ACP1" "mitochonrial acyl-carrier protein" 67,13,0,0 "ACP1" "mitochonrial acyl-carrier protein" ytyjl141c - 3,3,1,0 "YAK1" "ser/thr protein kinase" 40,3,0,0 "YAK1" "ser/thr protein kinase" ytyjr144w 3,1,5,1 "MGM101" "mitochondrial genome maintenance protein" 40,16,0,0 "MGM101" "mitochondrial genome maintenance protein" ytygr193c 1,5,1,0 "PDX1" "pyruvate dehydrogenase complex protein X" 2,1,0,0 "PDX1" "pyruvate dehydrogenase complex protein X" 40,16,0,0 "PDX1" "pyruvate dehydrogenase complex protein X" ytyhr137w - 1,1,4,0 "ARO9" "aromatic amino acid aminotransferase II" ytyor201c 4,1,4,0 "PET56" "rRNA (guanosine-2'-O-)-methyltransferase" 40,16,0,0 "PET56" "rRNA (guanosine-2'-O-)-methyltransferase" ytynl241c - 1,5,1,0 "ZWF1" "glucose-6-phosphate dehydrogenase" 11,1,0,0 "ZWF1" "glucose-6-phosphate dehydrogenase" 11,7,0,0 "ZWF1" "glucose-6-phosphate dehydrogenase" 2,7,0,0 "ZWF1" "glucose-6-phosphate dehydrogenase" 40,3,0,0 "ZWF1" "glucose-6-phosphate dehydrogenase" ytyol105c - 11,1,0,0 "WSC3" "cell wall integrity and stress response component 3" 40,1,0,0 "WSC3" "cell wall integrity and stress response component 3" ytybl045c 2,13,0,0 "COR1" "ubiquinol--cytochrome-c reductase 44K core protein" 40,16,0,0 "COR1" "ubiquinol--cytochrome-c reductase 44K core protein" ytylr157c - 1,1,10,0 "ASP3B" "L-asparaginase II" 40,1,0,0 "ASP3B" "L-asparaginase II" ytylr158c - 1,1,10,0 "ASP3C" "L-asparaginase II" 40,1,0,0 "ASP3C" "L-asparaginase II" ytyol108c - 1,6,10,0 "INO4" "basic helix-loop-helix transcription factor" 4,5,1,4 "INO4" "basic helix-loop-helix transcription factor" 40,10,0,0 "INO4" "basic helix-loop-helix transcription factor" ytyjl068c - 1,6,4,0 "null" "strong similarity to human esterase D" ytygr199w - 1,5,1,0 "PMT6" "putative mannosyltransferase" 6,7,0,0 "PMT6" "putative mannosyltransferase" ytyol044w - 40,19,0,0 "PEX15" "required for peroxisome assembly - peroxin" 8,10,0,0 "PEX15" "required for peroxisome assembly - peroxin" ytybl064c - 11,7,0,0 "null" "strong similarity to thiol-specific antioxidant enzyme" ytypr005c - 11,1,0,0 "HAL1" "salt-induced protein" 40,3,0,0 "HAL1" "salt-induced protein" ytyir036c - 1,5,1,0 "null" "similarity to E.coli fabD" ytypr020w 2,13,0,0 "ATP20" "subunit G of the dimeric form of mitochondrial F1F0-ATP Synthase" 40,16,0,0 "ATP20" "subunit G of the dimeric form of mitochondrial F1F0-ATP Synthase" ytymr055c - 3,3,1,3 "BUB2" "cell cycle arrest protein" ytykl109w - 4,5,1,4 "HAP4" "CCAAT-binding factor subunit" 40,10,0,0 "HAP4" "CCAAT-binding factor subunit" ytydr238c - 40,9,0,0 "SEC26" "coatomer complex beta chain of secretory pathway vesicles" 8,7,0,0 "SEC26" "coatomer complex beta chain of secretory pathway vesicles" ytymr150c 40,16,0,0 "IMP1" "protease, mitochondrial" 6,4,0,0 "IMP1" "protease, mitochondrial" 6,7,0,0 "IMP1" "protease, mitochondrial" ytylr258w - 1,5,1,0 "GSY2" "UDP-glucose--starch glucosyltransferase, isoform 2" 1,5,4,0 "GSY2" "UDP-glucose--starch glucosyltransferase, isoform 2" 2,19,0,0 "GSY2" "UDP-glucose--starch glucosyltransferase, isoform 2" 40,3,0,0 "GSY2" "UDP-glucose--starch glucosyltransferase, isoform 2" ytymr056c 1,3,19,0 "AAC1" "ADP/ATP carrier protein (MCF)" 40,16,0,0 "AAC1" "ADP/ATP carrier protein (MCF)" 67,16,0,0 "AAC1" "ADP/ATP carrier protein (MCF)" 8,4,0,0 "AAC1" "ADP/ATP carrier protein (MCF)" Propertest Accuracy: 37/104 (35.58%) Propertest Frequency class '40/16/0/0': 125/1292 (9.67%) New (unknown) data (851 items): ytyol129w - 99,0,0,0 "null" "similarity to hypothetical S. pombe protein" ytyor147w - 99,0,0,0 "null" "similarity to YHR194w" ytykr065c - 99,0,0,0 "null" "similarity to hypothetical protein S. pombe" ytycl042w - 99,0,0,0 "null" "questionable ORF" ytypr040w - 99,0,0,0 "SDF1" "similarity to C.elegans C02C2.6 protein" ytymr315w - 99,0,0,0 "null" "similarity to hypothetical S. pombe protein" ytypl024w - 98,0,0,0 "NCE4" "negative regulator of CTS1 expression" ytymr157c - 99,0,0,0 "null" "hypothetical protein" ytylr294c - 99,0,0,0 "null" "questionable ORF" ytygl129c - 98,0,0,0 "RSM23" "similarity to S.pombe hypothetical protein SPBC29A3.15C - putative mitochondrial function" ytymr158w - 99,0,0,0 "null" "weak similarity to E.coli ribosomal S8 protein" ytybl010c - 99,0,0,0 "null" "hypothetical protein" ytygr243w - 99,0,0,0 "null" "strong similarity to hypothetical protein YHR162w" ytyil157c - 99,0,0,0 "null" "weak similarity to PIR:T39578 hypothetical protein SPBC16E9.03c S. pombe" ytygl069c - 99,0,0,0 "null" "questionable ORF" ytypl221w - 99,0,0,0 "BOP1" "strong similarity to YGL139w and YAL053w" ytypr148c - 99,0,0,0 "null" "weak similarity to hypothetical protein S. pombe" ytygr010w - 99,0,0,0 "null" "strong similarity to hypothetical protein YLR328w" ytypl225w - 99,0,0,0 "null" "strong similarity to hypothetical protein SPBC3E7.07c S. pombe" ytyor289w - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein" ytyor215c - 99,0,0,0 "null" "similarity to M.xanthus hypothetical protein" ytynl176c - 99,0,0,0 "null" "weak similarity to HKR1P" ytynl336w - 99,0,0,0 "COS1" "strong similarity to subtelomeric encoded proteins" ytynr020c - 99,0,0,0 "null" "similarity to hypothetical metalloproteinase S. pombe" ytygl037c - 99,0,0,0 "PNC1" "similarity to PIR:B70386 pyrazinamidase/nicotinamidase - Aquifex aeolicus" ytyol071w - 99,0,0,0 "null" "similarity to hypothetical S. pombe protein" ytynl100w - 99,0,0,0 "null" "hypothetical protein" ytyor155c - 99,0,0,0 "null" "similarity to 5'-flanking region of the Pichia MOX gene" ytynr025c - 99,0,0,0 "null" "questionable ORF" ytypr114w - 99,0,0,0 "null" "similarity to YJR116w" ytyor253w - 99,0,0,0 "null" "weak similarity to 'separation anxiety protein-like'; A. thaliana" ytygr219w - 99,0,0,0 "null" "questionable ORF" ytyor255w - 99,0,0,0 "null" "hypothetical protein" ytyll019c - 98,0,0,0 "KNS1" "ser/thr protein kinase" ytygr250c - 99,0,0,0 "null" "weak similarity to human cleavage stimulation factor 64K chain" ytylr467w - 99,0,0,0 "YRF1-5" "strong similarity to subtelomeric encoded proteins" ytynl208w - 99,0,0,0 "null" "weak similarity to Colletotrichum gloeosporioides nitrogen starvation-induced glutamine rich protein" ytyor197w - 99,0,0,0 "null" "strong similarity to hypothetical protein SPCC1840.04 S. pombe" ytynl144c - 99,0,0,0 "null" "similarity to YHR131c" ytydr133c - 99,0,0,0 "null" "questionable ORF" ytyjr080c - 99,0,0,0 "null" "hypothetical protein" ytygr021w - 99,0,0,0 "null" "similarity to M.leprae yfcA protein" ytyjl066c - 99,0,0,0 "MPM1" "hypothetical protein" ytypr098c - 99,0,0,0 "null" "hypothetical protein" ytygr295c - 99,0,0,0 "COS6" "strong similarity to subtelomeric encoded proteins" ytyml050w - 99,0,0,0 "null" "weak similarity to potato sucrose cleavage protein" ytylr177w - 99,0,0,0 "null" "similarity to suppressor protein Psp5p" ytypl004c - 99,0,0,0 "null" "strong similarity to YGR086c" ytymr136w - 99,0,0,0 "GAT2" "weak similarity to YIR013c and YLR013w" ytyil135c - 99,0,0,0 "null" "similarity to Ymk1p" ytymr171c - 99,0,0,0 "null" "similarity to YKL124w" ytyor165w - 98,0,0,0 "null" "similarity to E.histolytica surface lectin" ytyml090w - 99,0,0,0 "null" "hypothetical protein" ytypr126c - 99,0,0,0 "null" "questionable ORF" ytygl146c - 99,0,0,0 "null" "hypothetical protein" ytykl069w - 99,0,0,0 "null" "strong similarity to hypothetical E.coli protein b1832" ytypr127w - 99,0,0,0 "null" "similarity to C-term. of N.tabacum auxin-induced protein" ytyhr121w - 99,0,0,0 "null" "weak similarity to C.elegans hypothetical protein" ytypr128c - 99,0,0,0 "ANT1" "peroxisomal ATP carrier" ytymr002w - 99,0,0,0 "null" "similarity to hypothetical S.pombe and C.elegans proteins" ytynl051w - 99,0,0,0 "COD4" "weak similarity to hypothetical protein Drosophila melanogaster" ytygr165w - 99,0,0,0 "null" "similarity to PIR:T39444 hypothetical protein SPBC14C8.16c S. pombe" ytypl207w - 99,0,0,0 "null" "similarity to hypthetical proteins from A. fulgidus, M. thermoautotrophicum and M. jannaschii" ytygl085w - 99,0,0,0 "null" "weak similarity to Staphylococcus aureus nuclease (SNase)" ytykl169c - 99,0,0,0 "null" "questionable ORF" ytylr241w - 99,0,0,0 "null" "similarity to hypothetical S.pombe protein SPAC2G11.09" ytyol114c - 99,0,0,0 "null" "similarity to human DS-1 protein" ytypl246c - 99,0,0,0 "null" "weak similarity to mouse proteinase activated receptor 2" ytyor135c - 99,0,0,0 "null" "questionable ORF" ytymr206w - 99,0,0,0 "null" "weak similarity to hypothetical protein YNR014w" ytygr130c - 99,0,0,0 "null" "weak similarity to myosin heavy chain proteins" ytydr247w - 99,0,0,0 "null" "strong similarity to SKS1P" ytyhl010c - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein, homolog to human breast cancer-associated protein BRAP2" ytykl137w - 99,0,0,0 "null" "weak similarity to hypothetical protein F1N13_200 - A. thaliana" ytypr038w - 99,0,0,0 "null" "questionable ORF" ytynl122c - 99,0,0,0 "null" "hypothetical protein" ytymr087w - 99,0,0,0 "null" "hypothetical protein" ytymr184w - 99,0,0,0 "null" "hypothetical protein" ytypl054w - 99,0,0,0 "LEE1" "similarity to S. pombe scp3/SPAC3A11.02 spindle poison sensitivity related protein" ytygr001c - 99,0,0,0 "null" "similarity to C.elegans hypothetical M142.5 protein" ytyer182w - 99,0,0,0 "null" "similarity to hypothetical protein SPAC3A12.08 - S. pombe" ytyhr136c - 98,0,0,0 "SPL2" "suppressor of PLC1-delta" ytykl100c - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein" ytybl108w - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytyhr139c-a - 99,0,0,0 "null" "hypothetical protein" ytypr172w - 99,0,0,0 "null" "strong similarity to YLR456w" ytygr101w - 99,0,0,0 "null" "weak similarity to B.subtilis YqgP" ytylr156w - 99,0,0,0 "null" "identical to hypothetical proteins YLR161w and YLR159w" ytyor042w - 99,0,0,0 "null" "weak similarity to YDR273w" ytydl133w - 99,0,0,0 "null" "hypothetical protein" ytypl159c - 99,0,0,0 "null" "weak similarity to YPR151c" ytymr210w - 99,0,0,0 "null" "similarity to P.glauca late embryogenesis abundant protein and YBR177c and YPL095c" ytypr002w - 99,0,0,0 "PDH1" "similarity to B.subtilis mmgE protein" ytylr253w - 99,0,0,0 "null" "weak similarity to bacterial aminoglycoside acetyltransferase regulators" ytylr159w - 99,0,0,0 "null" "identical to hypothetical proteins YLR161w and YLR156w" ytymr316c-b - 99,0,0,0 "null" "questionable ORF" ytydr154c - 99,0,0,0 "null" "questionable ORF" ytylr350w - 99,0,0,0 "null" "strong similarity to YGR038w" ytygl199c - 99,0,0,0 "null" "questionable ORF" ytypl191c - 99,0,0,0 "null" "strong similarity to YGL082w" ytypr100w - 99,0,0,0 "null" "weak similarity to C.elegans hypothetical protein CEC25A1" ytylr193c - 98,0,0,0 "null" "similarity to G.gallus px19 and MSF1P" ------------------ Rule 310: cellcycle_alpha14 <= 0.28 cellcycle_cdc28_20 <= 0.63 church_heat_heat <= 0.72 church_rel_heat_heat <= 0.08 derisi_r5_ratio <= 1 eisen_elu_60 > -0.49 eisen_heat_10 > -0.74 gasch1_Heat_Shock_000_minutes__hs_2 <= 0.97 gasch1_1point5_mM_diamide_30_min <= 0.46 gasch1_Nitrogen_Depletion_1_d > -0.96 gasch1_YPD_8_h_ypd_2 <= 0.96 gasch1_YPD_stationary_phase_5_d_ypd_1 <= 1.22 gasch1_DBYmsn2/4_real_strain_Plus_37degrees_20_min > -0.54 gasch1_YP_fructose_vs_reference_pool_car_2 > -0.67 gasch1_YP_raffinose_vs_reference_pool_car_2 <= 0.66 gasch1_29_deg_growth_ct_1 > -0.44 gasch1_steady_state_36_dec_C_ct_2_repeat_hyb <= 0.49 spo_t11Point5_correlation > 0.723 spo_t5_g/r_ratio > 0.38 -> class 4/5/0/0 "mRNA transcription" Evaluation on training data (1638 items): ytybr245c 4,5,1,4 "ISW1" "strong similarity to D.melanogaster iswi protein" ytymr231w - 40,25,0,0 "PEP5" "vacuolar biogenesis protein" 6,4,0,0 "PEP5" "vacuolar biogenesis protein" 8,7,0,0 "PEP5" "vacuolar biogenesis protein" ytylr100w - 1,6,1,0 "ERG27" "3-keto sterol reductase" ytygl043w 3,1,5,0 "DST1" "TFIIS (transcription elongation factor)" 4,5,1,1 "DST1" "TFIIS (transcription elongation factor)" 40,10,0,0 "DST1" "TFIIS (transcription elongation factor)" ytyil118w - 14,4,3,1 "RHO3" "GTP-binding protein of the rho family" ytymr073c - 2,13,0,0 "null" "weak similarity to C-terminal part of cytochrome b5 and b2" ytylr436c - 30,1,0,0 "ECM30" "involved in cell wall biogenesis and architecture" ytydr190c 3,1,9,5 "RVB1" "RUVB-like protein" 4,5,1,1 "RVB1" "RUVB-like protein" 40,10,0,0 "RVB1" "RUVB-like protein" ytyfr010w - 6,13,0,0 "UBP6" "ubiquitin-specific protease" 6,7,0,0 "UBP6" "ubiquitin-specific protease" ytymr154c - 14,4,3,5 "RIM13" "calpain-like cysteine protease" 6,1,0,0 "RIM13" "calpain-like cysteine protease" 6,7,0,0 "RIM13" "calpain-like cysteine protease" ytypl023c - 1,7,1,0 "MET12" "methylenetetrahydrofolate reductase" ytydr002w - 4,7,0,0 "YRB1" "ran-specific GTPase-activating protein" 40,3,0,0 "YRB1" "ran-specific GTPase-activating protein" 8,1,0,0 "YRB1" "ran-specific GTPase-activating protein" ytydr176w 1,5,4,0 "NGG1" "general transcriptional adaptor or co-activator" 4,5,1,4 "NGG1" "general transcriptional adaptor or co-activator" 40,10,0,0 "NGG1" "general transcriptional adaptor or co-activator" ytydl159w - 13,11,3,1 "STE7" "ser/thr/tyr protein kinase of MAP kinase kinase family" 13,11,3,7 "STE7" "ser/thr/tyr protein kinase of MAP kinase kinase family" 14,4,3,1 "STE7" "ser/thr/tyr protein kinase of MAP kinase kinase family" 14,4,3,3 "STE7" "ser/thr/tyr protein kinase of MAP kinase kinase family" ytymr234w - 1,3,16,0 "RNH1" "ribonuclease H" 30,1,0,0 "RNH1" "ribonuclease H" ytygr063c 3,1,5,0 "SPT4" "transcription elongation protein" 3,1,9,5 "SPT4" "transcription elongation protein" 4,5,1,1 "SPT4" "transcription elongation protein" 40,10,0,0 "SPT4" "transcription elongation protein" ytybl085w - 14,4,3,1 "BOI1" "BEM1 protein-binding protein" ytylr357w - 3,1,9,5 "RSC2" "member of RSC complex, which remodels the structure of chromatin" 30,10,3,0 "RSC2" "member of RSC complex, which remodels the structure of chromatin" ytycl029c - 14,4,3,3 "BIK1" "nuclear fusion protein" 3,3,1,0 "BIK1" "nuclear fusion protein" 40,10,0,0 "BIK1" "nuclear fusion protein" 40,4,0,0 "BIK1" "nuclear fusion protein" 40,5,0,0 "BIK1" "nuclear fusion protein" ytyhr101c - 1,5,1,0 "BIG1" "big cells phenotype" 3,3,1,0 "BIG1" "big cells phenotype" ytydr192c - 4,7,0,0 "NUP42" "nuclear pore protein" 40,10,0,0 "NUP42" "nuclear pore protein" 8,1,0,0 "NUP42" "nuclear pore protein" ytylr453c - 30,10,3,0 "RIF2" "RAP1P interacting factor 2" 40,10,0,0 "RIF2" "RAP1P interacting factor 2" ytypl105c - 40,4,0,0 "null" "similarity to SMY2P" ytyfr013w - 40,3,0,0 "IOC3" "similarity to YOL017w" ytyer151c 4,5,1,4 "UBP3" "ubiquitin-specific proteinase" 40,3,0,0 "UBP3" "ubiquitin-specific proteinase" 6,13,1,0 "UBP3" "ubiquitin-specific proteinase" ytylr026c - 40,8,0,0 "SED5" "syntaxin (T-SNARE)" 8,7,0,0 "SED5" "syntaxin (T-SNARE)" ytylr200w - 30,4,0,0 "YKE2" "Gim complex component" 40,3,0,0 "YKE2" "Gim complex component" 6,1,0,0 "YKE2" "Gim complex component" ytygl063w - 1,3,10,0 "PUS2" "pseudouridine synthase 2" 4,3,6,0 "PUS2" "pseudouridine synthase 2" ytyjr032w 14,1,0,0 "CPR7" "member of the cyclophilin family" 4,5,1,4 "CPR7" "member of the cyclophilin family" 6,1,0,0 "CPR7" "member of the cyclophilin family" ytyjl110c 1,2,4,0 "GZF3" "transcriptional repressor" 4,5,1,4 "GZF3" "transcriptional repressor" 40,10,0,0 "GZF3" "transcriptional repressor" ytyil073c - 14,4,3,5 "SPO22" "weak similarity to mouse polycystic kidney disease-related protein" ytygr227w - 1,5,4,0 "DIE2" "ITR1 expression promoting protein" ytygl065c - 1,5,1,0 "ALG2" "mannosyltransferase" 6,7,0,0 "ALG2" "mannosyltransferase" ytydr451c - 4,99,0,0 "YHP1" "strong similarity to YOX1P" ytyhl009c 4,5,1,4 "YAP3" "transcription factor, of a fungal-specific family of bzip proteins" 40,10,0,0 "YAP3" "transcription factor, of a fungal-specific family of bzip proteins" ytykl149c - 1,3,16,0 "DBR1" "lariat-debranching enzyme" 14,4,3,1 "DBR1" "lariat-debranching enzyme" 40,10,0,0 "DBR1" "lariat-debranching enzyme" ytybl011w - 67,99,0,0 "SCT1" "suppresses a choline-transport mutant" ytynr052c 1,5,4,0 "POP2" "required for glucose derepression" 14,4,3,5 "POP2" "required for glucose derepression" 4,5,1,4 "POP2" "required for glucose derepression" 40,10,0,0 "POP2" "required for glucose derepression" ytypr046w - 3,3,1,0 "MCM16" "involved in chromosome segregation" ytydr103w - 13,11,3,7 "STE5" "pheromone signal transduction pathway protein" 14,4,3,3 "STE5" "pheromone signal transduction pathway protein" ytyor344c 1,5,4,0 "TYE7" "basic helix-loop-helix transcription factor" 4,5,1,4 "TYE7" "basic helix-loop-helix transcription factor" 40,10,0,0 "TYE7" "basic helix-loop-helix transcription factor" ytydl006w - 1,5,4,0 "PTC1" "protein serine/threonine phosphatase 2c" 11,1,0,0 "PTC1" "protein serine/threonine phosphatase 2c" 13,11,3,13 "PTC1" "protein serine/threonine phosphatase 2c" 14,1,0,0 "PTC1" "protein serine/threonine phosphatase 2c" 14,4,3,1 "PTC1" "protein serine/threonine phosphatase 2c" 30,16,0,0 "PTC1" "protein serine/threonine phosphatase 2c" ytylr298c 4,5,5,1 "YHC1" "associated with the U1 snRNP complex" 40,10,0,0 "YHC1" "associated with the U1 snRNP complex" ytyhr041c 4,5,1,1 "SRB2" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit" 40,10,0,0 "SRB2" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit" ytycr066w - 3,1,5,1 "RAD18" "DNA repair protein" 40,10,0,0 "RAD18" "DNA repair protein" 6,7,0,0 "RAD18" "DNA repair protein" ytybr110w - 1,5,1,0 "ALG1" "beta-mannosyltransferase" 40,7,0,0 "ALG1" "beta-mannosyltransferase" 6,7,0,0 "ALG1" "beta-mannosyltransferase" ytybr030w - 1,5,1,0 "null" "weak similarity to regulatory protein MSR1P" ytypl125w - 6,4,0,0 "KAP120" "nuclear transport factor, member of karyopherin-beta family" 8,1,0,0 "KAP120" "nuclear transport factor, member of karyopherin-beta family" ytybl013w - 4,3,6,0 "FMT1" "Methionyl-tRNA Transformylase" 40,16,0,0 "FMT1" "Methionyl-tRNA Transformylase" ytypr048w - 1,6,1,0 "TAH18" "similarity to M.domestica NADPH--ferrihemoprotein reductase and mammalian nitric-oxide synthases" 2,13,0,0 "TAH18" "similarity to M.domestica NADPH--ferrihemoprotein reductase and mammalian nitric-oxide synthases" ytyer171w 3,1,5,1 "RAD3" "DNA helicase/ATPase" 4,5,1,1 "RAD3" "DNA helicase/ATPase" 40,10,0,0 "RAD3" "DNA helicase/ATPase" ytypr129w - 8,19,0,0 "SCD6" "suppressor of clathrin deficiency" ytyll043w - 1,5,7,0 "FPS1" "glycerol channel protein" 1,6,99,0 "FPS1" "glycerol channel protein" 11,1,0,0 "FPS1" "glycerol channel protein" 67,7,0,0 "FPS1" "glycerol channel protein" 8,16,0,0 "FPS1" "glycerol channel protein" 8,19,0,0 "FPS1" "glycerol channel protein" ytyor281c - 14,4,3,3 "PLP2" "phosducin homologue, likely to be involved in regulation of pheromone response" ytyjr132w - 1,3,16,0 "NMD5" "NAM7P interacting protein" ytyjr052w - 3,1,5,1 "RAD7" "nucleotide excision repair protein" 40,10,0,0 "RAD7" "nucleotide excision repair protein" ytydr027c - 40,8,0,0 "LUV1" "interacts with the beta-tubulin binding protein RBL2P" 40,99,0,0 "LUV1" "interacts with the beta-tubulin binding protein RBL2P" 8,7,0,0 "LUV1" "interacts with the beta-tubulin binding protein RBL2P" ytycr084c 4,5,1,4 "TUP1" "general transcription repressor" 40,10,0,0 "TUP1" "general transcription repressor" ytydr121w 4,5,1,1 "DPB4" "DNA polymerase II (epsilon) 4th subunit" ytyir002c - 11,7,0,0 "MPH1" "protection of the genome from spontaneous and chemically induced damage" 3,1,5,1 "MPH1" "protection of the genome from spontaneous and chemically induced damage" ytygl244w 4,5,1,1 "RTF1" "regulates DNA binding properties of TBP" 40,10,0,0 "RTF1" "regulates DNA binding properties of TBP" ytydr390c 4,5,5,0 "UBA2" "E1-like (ubiquitin-activating) enzyme" 40,10,0,0 "UBA2" "E1-like (ubiquitin-activating) enzyme" 6,13,1,0 "UBA2" "E1-like (ubiquitin-activating) enzyme" 6,7,0,0 "UBA2" "E1-like (ubiquitin-activating) enzyme" ytyer159c 4,5,1,4 "BUR6" "functional homolog of human NC2alpha" 40,10,0,0 "BUR6" "functional homolog of human NC2alpha" ytynl039w - 4,1,1,0 "BDP1" "TFIIIB subunit, 90 kD" 4,3,1,0 "BDP1" "TFIIIB subunit, 90 kD" 40,10,0,0 "BDP1" "TFIIIB subunit, 90 kD" ytyer173w - 3,1,5,0 "RAD24" "cell cycle checkpoint protein" 3,3,1,3 "RAD24" "cell cycle checkpoint protein" ytyml097c - 40,3,0,0 "VPS9" "vacuolar sorting protein" 6,4,0,0 "VPS9" "vacuolar sorting protein" 8,13,0,0 "VPS9" "vacuolar sorting protein" 8,7,0,0 "VPS9" "vacuolar sorting protein" ytyor363c 1,6,10,0 "PIP2" "peroxisome proliferating transcription factor" 4,5,1,4 "PIP2" "peroxisome proliferating transcription factor" 40,10,0,0 "PIP2" "peroxisome proliferating transcription factor" ytydr123c 1,6,10,0 "INO2" "basic helix-loop-helix (BHLH) transcription factor" 4,5,1,4 "INO2" "basic helix-loop-helix (BHLH) transcription factor" 40,10,0,0 "INO2" "basic helix-loop-helix (BHLH) transcription factor" ytyjr135c - 3,3,4,5 "MCM22" "required for maintenance of chromosomes and minichromosomes" ytypr161c - 14,1,0,0 "SGV1" "ser/thr protein kinase" 14,4,3,3 "SGV1" "ser/thr protein kinase" 3,3,1,0 "SGV1" "ser/thr protein kinase" ytybr115c - 1,1,1,0 "LYS2" "L-aminoadipate-semialdehyde dehydrogenase, large subunit" 40,3,0,0 "LYS2" "L-aminoadipate-semialdehyde dehydrogenase, large subunit" ytykl089w - 3,3,1,0 "MIF2" "required for normal chromosome segregation and spindle integrity" 40,10,3,0 "MIF2" "required for normal chromosome segregation and spindle integrity" ytyhr061c - 13,11,3,7 "GIC1" "CDC42 GTPase-binding protein" 14,1,3,99 "GIC1" "CDC42 GTPase-binding protein" 14,4,3,1 "GIC1" "CDC42 GTPase-binding protein" 14,4,3,3 "GIC1" "CDC42 GTPase-binding protein" 30,4,0,0 "GIC1" "CDC42 GTPase-binding protein" ytygl086w - 3,3,1,3 "MAD1" "spindle assembly checkpoint protein" 40,10,0,0 "MAD1" "spindle assembly checkpoint protein" ytykl010c - 40,3,0,0 "UFD4" "similarity to rat ubiquitin ligase Nedd4" 6,13,1,0 "UFD4" "similarity to rat ubiquitin ligase Nedd4" ytycr086w - 14,4,3,5 "CSM1" "involved in nuclear migration" 3,3,1,0 "CSM1" "involved in nuclear migration" 3,3,2,0 "CSM1" "involved in nuclear migration" ytyml098w 4,5,1,1 "TAF19" "TFIID subunit (TBP-associated factor), 19 kD" 40,10,0,0 "TAF19" "TFIID subunit (TBP-associated factor), 19 kD" ytyil095w - 3,3,1,0 "PRK1" "serine/threonine protein kinase involved in regulation of actin cytoskeleton organization" 40,3,0,0 "PRK1" "serine/threonine protein kinase involved in regulation of actin cytoskeleton organization" ytybr289w 1,5,4,0 "SNF5" "component of SWI/SNF transcription activator complex" 14,4,3,3 "SNF5" "component of SWI/SNF transcription activator complex" 4,5,1,4 "SNF5" "component of SWI/SNF transcription activator complex" 40,10,0,0 "SNF5" "component of SWI/SNF transcription activator complex" ytydr392w 14,4,3,3 "SPT3" "general transcriptional adaptor or co-activator" 4,5,1,4 "SPT3" "general transcriptional adaptor or co-activator" 40,10,0,0 "SPT3" "general transcriptional adaptor or co-activator" ytyil002c - 1,6,1,0 "INP51" "phosphatidylinositol phosphate 5-phosphatase" 1,6,99,0 "INP51" "phosphatidylinositol phosphate 5-phosphatase" 10,1,99,0 "INP51" "phosphatidylinositol phosphate 5-phosphatase" ytyml099c 1,1,4,0 "ARG81" "transcription factor involved in arginine metabolism" 1,2,4,0 "ARG81" "transcription factor involved in arginine metabolism" 4,5,1,4 "ARG81" "transcription factor involved in arginine metabolism" 40,10,0,0 "ARG81" "transcription factor involved in arginine metabolism" ytygl181w 11,1,0,0 "GTS1" "transcription factor of the GCS1P/GLO3P/SPS18P family" 14,4,3,1 "GTS1" "transcription factor of the GCS1P/GLO3P/SPS18P family" 3,3,1,0 "GTS1" "transcription factor of the GCS1P/GLO3P/SPS18P family" 4,5,1,4 "GTS1" "transcription factor of the GCS1P/GLO3P/SPS18P family" 40,10,0,0 "GTS1" "transcription factor of the GCS1P/GLO3P/SPS18P family" ytykl011c - 3,1,5,0 "CCE1" "cruciform-cutting endonuclease, mitochondrial" 40,16,0,0 "CCE1" "cruciform-cutting endonuclease, mitochondrial" ytynr059w - 1,5,1,0 "MNT4" "similarity to to alpha-1,3-mannosyltransferase" 6,7,0,0 "MNT4" "similarity to to alpha-1,3-mannosyltransferase" ytydl203c - 1,5,4,0 "null" "similarity to SKT5P" ytyjr010c-a - 40,7,0,0 "SPC1" "signal peptidase 10.8 kDa subunit" 6,7,0,0 "SPC1" "signal peptidase 10.8 kDa subunit" ytyjr057w - 1,3,4,0 "CDC8" "dTMP kinase" 40,3,0,0 "CDC8" "dTMP kinase" ytykl012w 4,5,5,1 "PRP40" "splicing factor" 40,10,0,0 "PRP40" "splicing factor" ytygr186w 4,5,1,1 "TFG1" "TFIIF subunit (transcription initiation factor), 105 kD" 40,10,0,0 "TFG1" "TFIIF subunit (transcription initiation factor), 105 kD" ytygr267c - 1,7,1,0 "FOL2" "GTP cyclohydrolase I" ytybr119w 4,5,5,1 "MUD1" "U1 snRNP-specific A protein" 40,10,0,0 "MUD1" "U1 snRNP-specific A protein" ytydr208w - 1,6,1,0 "MSS4" "phosphatidylinositol-4-phosphate 5-kinase" 10,1,99,0 "MSS4" "phosphatidylinositol-4-phosphate 5-kinase" 14,4,3,1 "MSS4" "phosphatidylinositol-4-phosphate 5-kinase" 30,4,0,0 "MSS4" "phosphatidylinositol-4-phosphate 5-kinase" 40,2,0,0 "MSS4" "phosphatidylinositol-4-phosphate 5-kinase" ytypl069c - 1,6,1,0 "BTS1" "geranylgeranyl diphosphate synthase" ytydl140c 4,5,1,1 "RPO21" "DNA-directed RNA polymerase II, 215 KD subunit" 40,10,0,0 "RPO21" "DNA-directed RNA polymerase II, 215 KD subunit" ytymr200w - 3,3,1,0 "ROT1" "mutant suppresses TOR2 mutation" ytymr294w - 3,3,1,0 "JNM1" "mitosis protein, involved in nuclear migration" 40,5,0,0 "JNM1" "mitosis protein, involved in nuclear migration" 8,22,0,0 "JNM1" "mitosis protein, involved in nuclear migration" ytylr403w - 14,1,0,0 "SFP1" "zinc finger protein" 3,3,1,0 "SFP1" "zinc finger protein" 40,10,0,0 "SFP1" "zinc finger protein" ytyer100w - 14,4,3,3 "UBC6" "E2 ubiquitin-conjugating enzyme" 40,10,0,0 "UBC6" "E2 ubiquitin-conjugating enzyme" 40,7,0,0 "UBC6" "E2 ubiquitin-conjugating enzyme" 6,13,1,0 "UBC6" "E2 ubiquitin-conjugating enzyme" 6,7,0,0 "UBC6" "E2 ubiquitin-conjugating enzyme" ytyir009w 4,5,5,1 "MSL1" "U2 snRNA-associated protein with similarity to U2B" 6,10,0,0 "MSL1" "U2 snRNA-associated protein with similarity to U2B" ytyhr146w - 10,1,5,5 "CRP1" "similarity to pheromone-response G-protein MDG1P" 13,11,3,7 "CRP1" "similarity to pheromone-response G-protein MDG1P" 14,4,3,3 "CRP1" "similarity to pheromone-response G-protein MDG1P" ytyal001c - 4,1,1,0 "TFC3" "TFIIIC (transcription initiation factor) subunit, 138 kD" 4,3,1,0 "TFC3" "TFIIIC (transcription initiation factor) subunit, 138 kD" 40,10,0,0 "TFC3" "TFIIIC (transcription initiation factor) subunit, 138 kD" ytyjl139c - 1,5,1,0 "YUR1" "mannosyltransferase" 40,8,0,0 "YUR1" "mannosyltransferase" ytyol113w - 14,1,3,0 "SKM1" "STE20/PAK-like protein kinase" ytynl250w - 3,1,5,1 "RAD50" "DNA repair protein" 3,3,2,0 "RAD50" "DNA repair protein" 40,10,0,0 "RAD50" "DNA repair protein" ytydr478w - 4,1,4,0 "SNM1" "RNA binding protein of RNase MRP" ytynl090w - 1,5,4,0 "RHO2" "GTP-binding protein of the RHO subfamily of RAS-like proteins" 10,1,5,5 "RHO2" "GTP-binding protein of the RHO subfamily of RAS-like proteins" 14,1,3,0 "RHO2" "GTP-binding protein of the RHO subfamily of RAS-like proteins" 14,4,3,1 "RHO2" "GTP-binding protein of the RHO subfamily of RAS-like proteins" 40,8,0,0 "RHO2" "GTP-binding protein of the RHO subfamily of RAS-like proteins" ytypr088c - 40,3,0,0 "SRP54" "signal recognition particle subunit" 6,4,0,0 "SRP54" "signal recognition particle subunit" ytymr042w 1,1,4,0 "ARG80" "transcription factor involved in arginine metabolism" 1,2,4,0 "ARG80" "transcription factor involved in arginine metabolism" 4,5,1,4 "ARG80" "transcription factor involved in arginine metabolism" 40,10,0,0 "ARG80" "transcription factor involved in arginine metabolism" ytykl017c - 3,3,1,0 "HCS1" "DNA helicase A" 3,3,2,0 "HCS1" "DNA helicase A" ytymr028w - 10,1,99,0 "TAP42" "component of the Tor signaling pathway" 3,3,1,0 "TAP42" "component of the Tor signaling pathway" 5,7,0,0 "TAP42" "component of the Tor signaling pathway" ytyil008w - 6,7,99,0 "URM1" "ubiquitin related modifier" ytyer022w 4,5,1,1 "SRB4" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit" 40,10,0,0 "SRB4" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit" ytydr145w 4,5,1,1 "TAF61" "TFIID and SAGA subunit" 4,5,1,4 "TAF61" "TFIID and SAGA subunit" ytykr034w 1,2,4,0 "DAL80" "transcriptional repressor for allantoin and GABA catabolic genes" 4,5,1,4 "DAL80" "transcriptional repressor for allantoin and GABA catabolic genes" 40,10,0,0 "DAL80" "transcriptional repressor for allantoin and GABA catabolic genes" ytylr166c - 40,2,0,0 "SEC10" "required for exocytosis" 40,3,0,0 "SEC10" "required for exocytosis" 8,16,0,0 "SEC10" "required for exocytosis" ytykl032c 4,5,1,4 "IXR1" "intrastrand crosslink recognition protein and transcription factor" 40,10,0,0 "IXR1" "intrastrand crosslink recognition protein and transcription factor" ytyol115w - 3,1,3,0 "TRF4" "topoisomerase I-related protein" 3,3,1,0 "TRF4" "topoisomerase I-related protein" 40,10,0,0 "TRF4" "topoisomerase I-related protein" ytydl224c - 14,1,0,0 "WHI4" "strong similarity to WHI3 protein" ytylr262c - 40,8,0,0 "YPT6" "GTP-binding protein of the rab family" 8,7,0,0 "YPT6" "GTP-binding protein of the rab family" ytykl019w - 1,6,7,0 "RAM2" "protein farnesyltransferase, alpha subunit" 40,3,0,0 "RAM2" "protein farnesyltransferase, alpha subunit" 6,7,0,0 "RAM2" "protein farnesyltransferase, alpha subunit" ytydr162c - 6,10,0,0 "NBP2" "NAP1P-binding protein" ytykl114c - 3,1,5,1 "APN1" "AP endonuclease" 40,10,0,0 "APN1" "AP endonuclease" ytydr308c 4,5,1,1 "SRB7" "DNA-directed RNA polymerase II holoenzyme and kornberg's mediator (SRB) subcomplex subunit" 40,10,0,0 "SRB7" "DNA-directed RNA polymerase II holoenzyme and kornberg's mediator (SRB) subcomplex subunit" ytykr037c - 40,5,0,0 "SPC34" "spindle pole body protein" ytyol051w 1,5,4,0 "GAL11" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit" 14,4,3,3 "GAL11" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit" 14,4,3,5 "GAL11" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit" 4,5,1,1 "GAL11" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit" 40,10,0,0 "GAL11" "DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit" ytypr186c - 4,1,1,0 "PZF1" "TFIIIA (transcription initiation factor)" 4,3,1,0 "PZF1" "TFIIIA (transcription initiation factor)" 40,10,0,0 "PZF1" "TFIIIA (transcription initiation factor)" ytygl112c 4,5,1,1 "TAF60" "TFIID and SAGA subunit" 4,5,1,4 "TAF60" "TFIID and SAGA subunit" 40,10,0,0 "TAF60" "TFIID and SAGA subunit" ytykr038c - 6,13,0,0 "null" "similarity to QRI7P" ytydr498c - 40,7,0,0 "SEC20" "secretory pathway protein" 6,4,0,0 "SEC20" "secretory pathway protein" 8,7,0,0 "SEC20" "secretory pathway protein" ytydr164c - 40,4,0,0 "SEC1" "protein transport protein" 8,16,0,0 "SEC1" "protein transport protein" ytymr222c - 1,7,1,0 "null" "similarity to S.pombe dihydrofolate reductase" ytyml125c - 2,13,0,0 "null" "strong similarity to cytochrome-b5- and nitrate reductases" ytypl011c 4,5,1,1 "TAF47" "component of the TBP-associated protein complex" ytybr236c 4,5,5,0 "ABD1" "mRNA cap methyltransferase" 40,10,0,0 "ABD1" "mRNA cap methyltransferase" ytymr208w - 1,6,10,0 "ERG12" "mevalonate kinase" 40,3,0,0 "ERG12" "mevalonate kinase" ytyor231w - 11,1,0,0 "MKK1" "ser/thr protein kinase" 14,1,3,0 "MKK1" "ser/thr protein kinase" 14,4,3,1 "MKK1" "ser/thr protein kinase" 3,3,1,0 "MKK1" "ser/thr protein kinase" ytybl074c 4,5,5,1 "AAR2" "A1 cistron splicing factor" 40,10,0,0 "AAR2" "A1 cistron splicing factor" ytylr266c 4,5,1,4 "null" "weak similarity to transcription factors" 40,10,0,0 "null" "weak similarity to transcription factors" ytynl272c - 40,3,0,0 "SEC2" "protein transport protein" 40,9,0,0 "SEC2" "protein transport protein" 8,16,0,0 "SEC2" "protein transport protein" 8,7,0,0 "SEC2" "protein transport protein" ytydr166c - 40,3,0,0 "SEC5" "required for exocytosis" 8,16,0,0 "SEC5" "required for exocytosis" ytygl035c 1,5,4,0 "MIG1" "transcriptional repressor" 4,5,1,4 "MIG1" "transcriptional repressor" 40,10,0,0 "MIG1" "transcriptional repressor" ytydr420w - 1,5,4,0 "HKR1" "Hansenula MrakII k9 killer toxin-resistance protein" 40,2,0,0 "HKR1" "Hansenula MrakII k9 killer toxin-resistance protein" ytymr224c - 3,1,5,1 "MRE11" "DNA repair and meiotic recombination protein" 3,3,1,0 "MRE11" "DNA repair and meiotic recombination protein" 3,3,2,0 "MRE11" "DNA repair and meiotic recombination protein" 30,1,0,0 "MRE11" "DNA repair and meiotic recombination protein" 40,10,0,0 "MRE11" "DNA repair and meiotic recombination protein" ytynl004w - 4,99,0,0 "HRB1" "strong similarity to GBP2P" ytygr119c - 40,10,0,0 "NUP57" "nuclear pore protein" 8,1,0,0 "NUP57" "nuclear pore protein" ytydr167w 4,5,1,1 "TAF25" "TFIID and SAGA subunit" 4,5,1,4 "TAF25" "TFIID and SAGA subunit" 40,10,0,0 "TAF25" "TFIID and SAGA subunit" ytynl020c - 30,4,0,0 "ARK1" "Actin Regulating Kinase" ytyer125w - 11,1,0,0 "RSP5" "hect domain E3 ubiquitin-protein ligase" 14,4,3,5 "RSP5" "hect domain E3 ubiquitin-protein ligase" 40,2,0,0 "RSP5" "hect domain E3 ubiquitin-protein ligase" 6,13,1,0 "RSP5" "hect domain E3 ubiquitin-protein ligase" 6,7,0,0 "RSP5" "hect domain E3 ubiquitin-protein ligase" ytydr182w - 13,1,1,1 "CDC1" "cell division control protein" 14,1,0,0 "CDC1" "cell division control protein" 14,4,3,1 "CDC1" "cell division control protein" 14,4,3,5 "CDC1" "cell division control protein" 3,1,5,0 "CDC1" "cell division control protein" 3,3,1,0 "CDC1" "cell division control protein" 40,3,0,0 "CDC1" "cell division control protein" ytyml049c 4,5,5,1 "RSE1" "involved in RNA splicing and ER to Golgi transport" 8,7,0,0 "RSE1" "involved in RNA splicing and ER to Golgi transport" ytypl189w - 67,7,99,0 "GUP2" "putative glycerol transporter involved in active glycerol uptake" ytymr227c 4,5,1,1 "TAF67" "TFIID subunit (TBP-associated factor), 67 kD" 40,10,0,0 "TAF67" "TFIID subunit (TBP-associated factor), 67 kD" ytyil061c 4,5,5,1 "SNP1" "U1 small nuclear ribonucleoprotein" 40,10,0,0 "SNP1" "U1 small nuclear ribonucleoprotein" ytyer047c - 40,10,0,0 "SAP1" "member of the AAA-protein family" 6,13,0,0 "SAP1" "member of the AAA-protein family" ytycr052w 3,1,9,5 "RSC6" "subunit of the RSC complex" 3,3,1,0 "RSC6" "subunit of the RSC complex" 4,5,1,4 "RSC6" "subunit of the RSC complex" 40,10,3,0 "RSC6" "subunit of the RSC complex" ytydl088c - 3,1,5,1 "ASM4" "component of the karyopherin docking complex of the nuclear pore complex" ytynl197c - 14,1,0,0 "WHI3" "involved in regulation of cell size" 14,4,3,1 "WHI3" "involved in regulation of cell size" ytyal042w - 40,7,0,0 "ERV46" "component of copii vesicles involved in transport between the ER and golgi complex" 40,8,0,0 "ERV46" "component of copii vesicles involved in transport between the ER and golgi complex" 8,7,0,0 "ERV46" "component of copii vesicles involved in transport between the ER and golgi complex" ytyal043c 4,3,3,0 "PTA1" "pre-tRNA processing protein / PF I subunit" 4,5,5,0 "PTA1" "pre-tRNA processing protein / PF I subunit" 40,10,0,0 "PTA1" "pre-tRNA processing protein / PF I subunit" ytyol075c - 67,50,25,0 "null" "similarity to A.gambiae ATP-binding-cassette protein" ytyer144c - 6,13,1,0 "UBP5" "ubiquitin-specific protease" ytygl215w - 3,3,1,0 "CLG1" "cyclin-like protein" ytygl150c 4,5,1,4 "INO80" "similarity to SNF2P and human SNF2alpha" ytygr233c - 1,4,4,0 "PHO81" "cyclin-dependent kinase inhibitor" ytyor079c - 11,7,0,0 "ATX2" "multicopy suppressor of SOD-linked defects" 13,1,1,1 "ATX2" "multicopy suppressor of SOD-linked defects" 40,8,0,0 "ATX2" "multicopy suppressor of SOD-linked defects" ytynl199c 1,5,4,0 "GCR2" "glycolytic genes transcriptional activator" 4,5,1,4 "GCR2" "glycolytic genes transcriptional activator" 40,10,0,0 "GCR2" "glycolytic genes transcriptional activator" ytypr131c - 6,7,4,0 "NAT3" "N-acetyltransferases" ytylr019w - 6,7,3,0 "PSR2" "plasma membrane phosphatase required for sodium stress response" ytydr362c - 4,1,1,0 "TFC6" "TFIIIC (transcription initiation factor) subunit, 91 kD" 4,3,1,0 "TFC6" "TFIIIC (transcription initiation factor) subunit, 91 kD" 40,10,0,0 "TFC6" "TFIIIC (transcription initiation factor) subunit, 91 kD" ytypr051w - 40,3,0,0 "MAK3" "N-acetyltransferase" 6,7,0,0 "MAK3" "N-acetyltransferase" ytymr180c 4,5,5,0 "CTL1" "RNA 5'-triphosphatase with manganese- or cobalt-dependent NTPase activities" ytyel062w - 1,2,4,0 "NPR2" "nitrogen permease regulator" ytykl154w - 40,7,0,0 "SRP102" "signal recognition particle receptor, beta chain" 6,4,0,0 "SRP102" "signal recognition particle receptor, beta chain" ytyel063c - 1,1,7,0 "CAN1" "amino acid permease" 40,2,0,0 "CAN1" "amino acid permease" 67,10,0,0 "CAN1" "amino acid permease" 8,19,0,0 "CAN1" "amino acid permease" ytydr443c 1,5,4,0 "SSN2" "DNA-directed RNA polymerase II holoenzyme and Srb10 CDK subcomplex subunit" 4,5,1,1 "SSN2" "DNA-directed RNA polymerase II holoenzyme and Srb10 CDK subcomplex subunit" 40,10,0,0 "SSN2" "DNA-directed RNA polymerase II holoenzyme and Srb10 CDK subcomplex subunit" ytyjr040w - 13,1,3,5 "GEF1" "voltage-gated chloride channel protein" 40,2,0,0 "GEF1" "voltage-gated chloride channel protein" 67,4,7,0 "GEF1" "voltage-gated chloride channel protein" 8,19,0,0 "GEF1" "voltage-gated chloride channel protein" ytybr274w - 3,3,1,3 "CHK1" "regulats inhibitory Cdk phosphorylation of PDS1" ytyml069w 3,1,5,0 "POB3" "protein that binds to DNA polymerase I (PolI)" 4,5,0,0 "POB3" "protein that binds to DNA polymerase I (PolI)" 40,10,0,0 "POB3" "protein that binds to DNA polymerase I (PolI)" ytygr075c 4,5,5,1 "PRP38" "pre-mRNA splicing factor" 40,10,0,0 "PRP38" "pre-mRNA splicing factor" ytydr189w - 40,3,0,0 "SLY1" "hydrophilic suppressor of YPT1 and member of the SEC1P family" 40,8,0,0 "SLY1" "hydrophilic suppressor of YPT1 and member of the SEC1P family" 8,7,0,0 "SLY1" "hydrophilic suppressor of YPT1 and member of the SEC1P family" ytynl107w 4,5,1,4 "YAF9" "similarity to human AF-9 protein" ytyor336w - 1,5,1,0 "KRE5" "killer toxin-resistance protein" 14,1,0,0 "KRE5" "killer toxin-resistance protein" 40,7,0,0 "KRE5" "killer toxin-resistance protein" ytyfr025c - 1,1,1,0 "HIS2" "histidinol phosphatase" ytybr276c - 3,3,1,0 "PPS1" "protein tyrosine phosphatase" ytydl013w - 1,5,1,0 "HEX3" "hexose metabolism-related protein" ytygr170w - 1,6,1,0 "PSD2" "phosphatidylserine decarboxylase 2" 40,8,0,0 "PSD2" "phosphatidylserine decarboxylase 2" ytylr117c 3,3,1,0 "CLF1" "strong similarity to Drosophila putative cell cycle control protein crn" 4,5,5,1 "CLF1" "strong similarity to Drosophila putative cell cycle control protein crn" ytylr037c - 40,1,0,0 "DAN2" "strong similarity to members of the SRP1P/TIP1P family" ytydl188c - 1,5,4,0 "PPH22" "protein ser/thr phosphatase PP2A-2" 14,1,0,0 "PPH22" "protein ser/thr phosphatase PP2A-2" 14,4,3,1 "PPH22" "protein ser/thr phosphatase PP2A-2" 3,3,1,0 "PPH22" "protein ser/thr phosphatase PP2A-2" 30,1,0,0 "PPH22" "protein ser/thr phosphatase PP2A-2" ytyjl200c - 2,10,0,0 "null" "strong similarity to aconitate hydratase" ytymr183c - 40,2,0,0 "SSO2" "syntaxin (T-SNARE)" 8,7,0,0 "SSO2" "syntaxin (T-SNARE)" ytyer068w 14,4,3,3 "MOT2" "transcriptional repressor" 4,5,1,4 "MOT2" "transcriptional repressor" 40,10,0,0 "MOT2" "transcriptional repressor" ytyil149c - 40,4,0,0 "MLP2" "involved in translocation of macromolecules between the nucleoplasm and the NPC" 8,1,0,0 "MLP2" "involved in translocation of macromolecules between the nucleoplasm and the NPC" ytyol095c - 3,1,3,0 "HMI1" "mitochondrial DNA helicase" ytykl092c - 14,4,3,1 "BUD2" "GTPase-activating protein for Bud1p/RSR1P" ytydr460w 3,1,5,1 "TFB3" "TFIIH subunit (transcription/repair factor)" 4,5,1,1 "TFB3" "TFIIH subunit (transcription/repair factor)" 6,10,0,0 "TFB3" "TFIIH subunit (transcription/repair factor)" ytyol001w 1,4,4,0 "PHO80" "cyclin" 4,5,1,4 "PHO80" "cyclin" 40,10,0,0 "PHO80" "cyclin" ytybr198c 4,5,1,1 "TAF90" "TFIID and SAGA subunit" 4,5,1,4 "TAF90" "TFIID and SAGA subunit" 40,10,0,0 "TAF90" "TFIID and SAGA subunit" ytyor005c - 14,4,3,5 "DNL4" "DNA ligase IV" 3,1,5,1 "DNL4" "DNA ligase IV" 3,3,2,0 "DNL4" "DNA ligase IV" 40,10,0,0 "DNL4" "DNA ligase IV" ytypl213w 4,5,5,1 "LEA1" "U2 A' snRNP protein" 6,10,0,0 "LEA1" "U2 A' snRNP protein" ytykl159c 13,1,1,3 "RCN1" "inhibitor of calcineurin" 13,1,1,99 "RCN1" "inhibitor of calcineurin" 4,5,1,4 "RCN1" "inhibitor of calcineurin" ytyer164w 4,5,1,4 "CHD1" "transcriptional regulator" ytylr119w - 4,7,0,0 "SRN2" "suppressor of RNA1-1 mutation" 8,1,0,0 "SRN2" "suppressor of RNA1-1 mutation" ytyfl025c - 40,7,0,0 "BST1" "negative regulator of COPII vesicle formation" 8,7,0,0 "BST1" "negative regulator of COPII vesicle formation" ytydl030w 4,5,5,1 "PRP9" "pre-mRNA splicing factor (snRNA-associated protein)" 40,10,0,0 "PRP9" "pre-mRNA splicing factor (snRNA-associated protein)" ytykr002w 4,5,5,0 "PAP1" "poly(A) polymerase" 40,10,0,0 "PAP1" "poly(A) polymerase" ytygl090w - 14,4,3,5 "LIF1" "DNA ligase IV interacting factor" 3,1,5,1 "LIF1" "DNA ligase IV interacting factor" 3,3,2,0 "LIF1" "DNA ligase IV interacting factor" 40,10,0,0 "LIF1" "DNA ligase IV interacting factor" ytygl237c 4,5,1,4 "HAP2" "CCAAT-binding factor subunit" 40,10,0,0 "HAP2" "CCAAT-binding factor subunit" ytyjr140c 3,3,1,0 "HIR3" "involved in cell cycle regulation of histone transcription" 4,5,1,4 "HIR3" "involved in cell cycle regulation of histone transcription" ytybr279w 4,5,1,4 "PAF1" "DNA-directed RNA polymerase II regulator" 40,10,0,0 "PAF1" "DNA-directed RNA polymerase II regulator" ytylr389c - 14,4,3,3 "STE23" "protease involved in a-factor processing" 6,7,0,0 "STE23" "protease involved in a-factor processing" ytylr055c 4,5,1,4 "SPT8" "transcriptional adaptor or co-activator" 40,10,0,0 "SPT8" "transcriptional adaptor or co-activator" ytyjr060w 1,1,4,0 "CBF1" "kinetochore protein" 1,2,4,0 "CBF1" "kinetochore protein" 3,3,1,0 "CBF1" "kinetochore protein" 30,10,0,0 "CBF1" "kinetochore protein" 4,5,1,4 "CBF1" "kinetochore protein" 40,10,3,0 "CBF1" "kinetochore protein" ytyhr118c 14,4,3,3 "ORC6" "origin recognition complex, 50 KD subunit" 3,1,3,0 "ORC6" "origin recognition complex, 50 KD subunit" 4,5,1,4 "ORC6" "origin recognition complex, 50 KD subunit" 40,10,0,0 "ORC6" "origin recognition complex, 50 KD subunit" ytykr004c - 30,1,0,0 "ECM9" "involved in cell wall biogenesis and architecture" ytydr289c - 29,99,0,0 "RTT103" "regulator of Ty1 Transposition" ytyjl124c 4,5,5,0 "LSM1" "Sm-like (Lsm) protein" ytyfr029w 4,5,1,4 "PTR3" "regulator of expression of the PTR2, GAP1 and BAP2 genes" ytygl172w - 4,7,0,0 "NUP49" "nuclear pore protein" 40,10,0,0 "NUP49" "nuclear pore protein" 8,1,0,0 "NUP49" "nuclear pore protein" ytyir011c - 4,7,0,0 "STS1" "required for transport of RNA15P from the cytoplasm to the nucleus" 40,3,0,0 "STS1" "required for transport of RNA15P from the cytoplasm to the nucleus" 8,1,0,0 "STS1" "required for transport of RNA15P from the cytoplasm to the nucleus" ytyfl028c 4,5,1,4 "CAF16" "ATP-binding cassette transporter family member" ytylr071c 1,5,4,0 "RGR1" "DNA-directed RNA polymerase II holoenzyme subunit" 14,4,3,1 "RGR1" "DNA-directed RNA polymerase II holoenzyme subunit" 14,4,3,3 "RGR1" "DNA-directed RNA polymerase II holoenzyme subunit" 2,19,0,0 "RGR1" "DNA-directed RNA polymerase II holoenzyme subunit" 4,5,1,1 "RGR1" "DNA-directed RNA polymerase II holoenzyme subunit" 40,10,0,0 "RGR1" "DNA-directed RNA polymerase II holoenzyme subunit" ytymr283c - 4,3,6,0 "RIT1" "initiator tRNA phosphoribosyl-transferase" ytybr123c - 30,1,0,0 "TFC1" "TFIIIC (transcription initiation factor) subunit, 95 kD" 4,1,1,0 "TFC1" "TFIIIC (transcription initiation factor) subunit, 95 kD" 4,3,1,0 "TFC1" "TFIIIC (transcription initiation factor) subunit, 95 kD" 40,10,0,0 "TFC1" "TFIIIC (transcription initiation factor) subunit, 95 kD" ytybr043c - 11,7,0,0 "null" "similarity to benomyl/methotrexate resistance protein" 67,28,0,0 "null" "similarity to benomyl/methotrexate resistance protein" ytyor372c - 3,3,1,0 "NDD1" "protein required for nuclear division" 3,3,3,0 "NDD1" "protein required for nuclear division" ytycr094w - 3,3,1,0 "CDC50" "cell division cycle mutant" ytygr098c - 3,3,1,0 "ESP1" "required for sister chromatid separation" 40,10,0,0 "ESP1" "required for sister chromatid separation" ytymr016c 10,1,99,0 "SOK2" "regulatory protein in the PKA signal transduction pathway" 14,4,3,1 "SOK2" "regulatory protein in the PKA signal transduction pathway" 4,5,1,4 "SOK2" "regulatory protein in the PKA signal transduction pathway" 40,10,0,0 "SOK2" "regulatory protein in the PKA signal transduction pathway" ytykr101w 14,4,3,3 "SIR1" "silencing regulatory protein" 4,5,1,4 "SIR1" "silencing regulatory protein" 40,10,0,0 "SIR1" "silencing regulatory protein" ytydr386w - 3,1,5,1 "MUS81" "involved in the repair of UV and methylation induced DNA damage" ytykl179c - 3,3,1,0 "null" "similarity to NUF1P" 30,4,0,0 "null" "similarity to NUF1P" ytypl219w - 1,5,4,0 "PCL8" "cyclin like protein interacting with PHO85P" 2,19,0,0 "PCL8" "cyclin like protein interacting with PHO85P" ytygr005c 4,5,1,1 "TFG2" "TFIIF subunit (transcription initiation factor), 54 kD" 40,10,0,0 "TFG2" "TFIIF subunit (transcription initiation factor), 54 kD" ytygr179c - 3,3,1,0 "OKP1" "component of centromere/kinetochore-associated protein network" ytykr008w - 3,1,9,5 "RSC4" "member of RSC complex, which remodels the structure of chromatin" 30,10,3,0 "RSC4" "member of RSC complex, which remodels the structure of chromatin" 40,10,0,0 "RSC4" "member of RSC complex, which remodels the structure of chromatin" ytykl020c - 3,1,9,5 "SPT23" "dosage-dependent suppressor of Ty-induced promotor mutations" 40,10,0,0 "SPT23" "dosage-dependent suppressor of Ty-induced promotor mutations" ytydr468c - 30,25,0,0 "TLG1" "member of the syntaxin family of t-SNAREs" 30,7,0,0 "TLG1" "member of the syntaxin family of t-SNAREs" 40,22,0,0 "TLG1" "member of the syntaxin family of t-SNAREs" 40,25,0,0 "TLG1" "member of the syntaxin family of t-SNAREs" 40,8,0,0 "TLG1" "member of the syntaxin family of t-SNAREs" 6,4,0,0 "TLG1" "member of the syntaxin family of t-SNAREs" 8,13,0,0 "TLG1" "member of the syntaxin family of t-SNAREs" 8,19,0,0 "TLG1" "member of the syntaxin family of t-SNAREs" 8,7,0,0 "TLG1" "member of the syntaxin family of t-SNAREs" ytygl257c - 1,5,1,0 "MNT2" "alpha-1,3-mannosyltransferases responsible for adding the terminal mannose residues of O-linked oligosaccharides" 6,7,0,0 "MNT2" "alpha-1,3-mannosyltransferases responsible for adding the terminal mannose residues of O-linked oligosaccharides" ytypl074w - 6,13,1,0 "YTA6" "similarity to VPS4P and YER047c" ytynr069c - 6,13,0,0 "null" "similarity to central part of BUL1P" ytymr112c 4,5,1,1 "MED11" "mediator complex subunit" 40,10,0,0 "MED11" "mediator complex subunit" ytygr006w 4,5,5,1 "PRP18" "U5 snRNA-associated protein" 40,10,0,0 "PRP18" "U5 snRNA-associated protein" ytyjl209w 4,5,5,0 "CBP1" "apo-cytochrome b pre-mRNA processing protein" 40,16,0,0 "CBP1" "apo-cytochrome b pre-mRNA processing protein" ytyhr058c 4,5,1,4 "MED6" "RNA polymerase II transcriptional regulation mediator" 40,10,0,0 "MED6" "RNA polymerase II transcriptional regulation mediator" ytypl075w 1,5,4,0 "GCR1" "transcriptional activator" 4,5,1,4 "GCR1" "transcriptional activator" 40,10,0,0 "GCR1" "transcriptional activator" ytyml016c - 11,1,0,0 "PPZ1" "ser/thr phosphatase required for normal osmoregulation" ytykr104w - 11,7,0,0 "null" "similarity to multidrug resistance proteins" 67,50,25,0 "null" "similarity to multidrug resistance proteins" ytydr389w - 40,4,0,0 "SAC7" "suppressor of actin mutation" 6,10,0,0 "SAC7" "suppressor of actin mutation" ytynl147w 4,5,5,1 "LSM7" "Sm-like (Lsm) protein" 40,10,0,0 "LSM7" "Sm-like (Lsm) protein" ytykl022c - 3,3,1,0 "CDC16" "subunit of anaphase-promoting complex (cyclosome)" 40,10,0,0 "CDC16" "subunit of anaphase-promoting complex (cyclosome)" 40,4,0,0 "CDC16" "subunit of anaphase-promoting complex (cyclosome)" 6,13,1,0 "CDC16" "subunit of anaphase-promoting complex (cyclosome)" 6,7,0,0 "CDC16" "subunit of anaphase-promoting complex (cyclosome)" ytymr113w - 1,7,1,0 "FOL3" "dihydrofolate synthetase" ytyjl065c - 3,1,3,0 "null" "weak similarity to DNA-directed DNA polymerase II chain C" ytydr484w - 40,4,0,0 "SAC2" "suppressor of actin mutation" 40,8,0,0 "SAC2" "suppressor of actin mutation" 8,7,0,0 "SAC2" "suppressor of actin mutation" ytybr128c - 6,13,99,0 "APG14" "required for autophagy" ytyor123c - 6,13,1,1 "LEO1" "extremely hydrophilic protein" ytyml111w - 6,13,1,0 "BUL2" "strong similarity to ubiquitination protein BUL1P" 6,7,0,0 "BUL2" "strong similarity to ubiquitination protein BUL1P" ytydl134c - 1,5,4,0 "PPH21" "protein ser/thr phosphatase PP2A-1" 14,1,0,0 "PPH21" "protein ser/thr phosphatase PP2A-1" 14,4,3,1 "PPH21" "protein ser/thr phosphatase PP2A-1" 3,3,1,0 "PPH21" "protein ser/thr phosphatase PP2A-1" ytydr217c 3,1,5,0 "RAD9" "DNA repair checkpoint protein" 3,3,1,3 "RAD9" "DNA repair checkpoint protein" 4,5,1,4 "RAD9" "DNA repair checkpoint protein" 40,10,0,0 "RAD9" "DNA repair checkpoint protein" ytygr197c - 11,7,0,0 "SNG1" "involved in nitroguanidine resistance" 67,28,0,0 "SNG1" "involved in nitroguanidine resistance" ytynl083w - 8,4,0,0 "null" "weak similarity to rabbit peroxisomal Ca-dependent solute carrier" ytybl061c - 1,5,4,0 "SKT5" "protoplast regeneration and killer toxin resistance protein" 30,1,0,0 "SKT5" "protoplast regeneration and killer toxin resistance protein" ytydr138w 3,1,5,0 "HPR1" "hyperrecombination protein related to TOP1P" 4,5,1,4 "HPR1" "hyperrecombination protein related to TOP1P" 40,10,0,0 "HPR1" "hyperrecombination protein related to TOP1P" ytynl325c - 13,11,3,7 "FIG4" "weak similarity to inositol phosphatase" 8,16,0,0 "FIG4" "weak similarity to inositol phosphatase" ytyml113w - 40,10,0,0 "DAT1" "datin, oligo(dA)/oligo(dT)-binding protein" ytypl239w - 3,3,1,0 "YAR1" "ankyrin repeat-containing protein" ytydl070w 4,5,1,4 "BDF2" "similarity to bromodomain protein BDF1P" ytykr028w - 14,4,3,1 "SAP190" "SIT4P-associated protein" 3,3,1,0 "SAP190" "SIT4P-associated protein" ytycr008w - 11,1,0,0 "SAT4" "serine/threonine-specific protein kinase" ytypl001w - 40,10,0,0 "HAT1" "histone acetyltransferase subunit" 40,3,0,0 "HAT1" "histone acetyltransferase subunit" 6,7,0,0 "HAT1" "histone acetyltransferase subunit" ytyer112w 4,5,5,1 "LSM4" "Sm-like (Lsm) protein" 40,10,0,0 "LSM4" "Sm-like (Lsm) protein" ytymr039c 4,5,1,4 "SUB1" "transcriptional coactivator" 40,10,0,0 "SUB1" "transcriptional coactivator" ytylr336c - 13,11,3,13 "SGD1" "involved in HOG pathway" ytynr010w 3,3,1,0 "CSE2" "subunit of RNA polymerase II mediator complex" 4,5,1,1 "CSE2" "subunit of RNA polymerase II mediator complex" 40,10,0,0 "CSE2" "subunit of RNA polymerase II mediator complex" ytykl027w - 1,7,1,0 "null" "similarity to E.coli molybdopterin-converting factor chlN" ytylr430w - 4,3,3,0 "SEN1" "positive effector of tRNA-splicing endonuclease" 40,10,0,0 "SEN1" "positive effector of tRNA-splicing endonuclease" ytyhr079c - 1,6,10,0 "IRE1" "protein kinase" 10,1,99,0 "IRE1" "protein kinase" 11,1,0,0 "IRE1" "protein kinase" 40,7,0,0 "IRE1" "protein kinase" ytynr011c 4,5,5,1 "PRP2" "RNA-dependent ATPase of DEAH box family" 40,10,0,0 "PRP2" "RNA-dependent ATPase of DEAH box family" ytygl025c 3,1,5,0 "PGD1" "mediator complex subunit" 4,5,1,4 "PGD1" "mediator complex subunit" 40,10,0,0 "PGD1" "mediator complex subunit" ytyer114c - 14,4,3,1 "BOI2" "budding protein" ytybr162w-a - 6,4,0,0 "YSY6" "secretory pathway protein" 8,16,0,0 "YSY6" "secretory pathway protein" ytynl088w - 3,1,3,0 "TOP2" "DNA topoisomerase II (ATP-hydrolysing)" 3,1,5,0 "TOP2" "DNA topoisomerase II (ATP-hydrolysing)" 40,10,0,0 "TOP2" "DNA topoisomerase II (ATP-hydrolysing)" ytydr251w - 11,1,0,0 "PAM1" "coiled-coil protein multicopy suppressor of loss of PP2A" 14,1,0,0 "PAM1" "coiled-coil protein multicopy suppressor of loss of PP2A" 14,4,3,1 "PAM1" "coiled-coil protein multicopy suppressor of loss of PP2A" ytycr040w 14,4,3,3 "MATALPHA1" "mating type regulatory protein, expressed copy at MAT locus" 4,5,1,4 "MATALPHA1" "mating type regulatory protein, expressed copy at MAT locus" 40,10,0,0 "MATALPHA1" "mating type regulatory protein, expressed copy at MAT locus" ytylr098c 1,1,4,0 "CHA4" "transcription factor" 4,5,1,4 "CHA4" "transcription factor" 40,10,0,0 "CHA4" "transcription factor" ytycr106w 4,5,1,4 "null" "similarity to transcription factor" 40,10,0,0 "null" "similarity to transcription factor" ytyor304w 4,5,1,4 "ISW2" "strong similarity to Drosophila ISW1 and human SNF2P homolog" ytydr252w 4,5,1,4 "BTT1" "alternate beta subunit of the nascent polypeptide-associated complex" ytykl204w - 5,4,1,0 "EAP1" "translation initiation factor 4E-associated protein" ytydr253c 1,1,4,0 "MET32" "transcriptional regulator of sulfur amino acid metabolism" 1,2,4,0 "MET32" "transcriptional regulator of sulfur amino acid metabolism" 4,5,1,4 "MET32" "transcriptional regulator of sulfur amino acid metabolism" ytymr070w 4,5,1,4 "MOT3" "high-copy suppressor of MOT1-SPT3 synthetic lethality" ytyil130w 4,5,1,4 "null" "similarity to PUT3P and to hypothetical protein YJL206c" ytypl193w - 5,1,0,0 "RSA1" "nucleoplasmic protein involved in assembly of 60S ribosomal subunits" ytykr048c - 14,4,3,1 "NAP1" "nucleosome assembly protein I" 3,3,1,0 "NAP1" "nucleosome assembly protein I" 30,10,3,0 "NAP1" "nucleosome assembly protein I" 40,10,0,0 "NAP1" "nucleosome assembly protein I" 6,10,0,0 "NAP1" "nucleosome assembly protein I" ytyol142w - 3,1,5,0 "RRP40" "protein involved in ribosomal RNA processing, component of the exosome complex responsible for 3' end processing and degradation of many RNA species" ytylr005w 3,1,5,1 "SSL1" "TFIIH subunit (transcription initiation factor), factor B" 4,5,1,1 "SSL1" "TFIIH subunit (transcription initiation factor), factor B" 5,4,0,0 "SSL1" "TFIIH subunit (transcription initiation factor), factor B" ytycr028c - 1,1,4,0 "FEN2" "high affinity H+/pantothenate symporter" 1,2,4,0 "FEN2" "high affinity H+/pantothenate symporter" 1,5,4,0 "FEN2" "high affinity H+/pantothenate symporter" 1,6,10,0 "FEN2" "high affinity H+/pantothenate symporter" 67,19,0,0 "FEN2" "high affinity H+/pantothenate symporter" Training Accuracy: 103/298 (34.56%) Training Frequency class '4/5/0/0': 232/1638 (14.16%) Evaluation on validation data (851 items): ytyor219c - 14,4,3,3 "STE13" "type IV dipeptidyl aminopeptidase" 40,8,0,0 "STE13" "type IV dipeptidyl aminopeptidase" 6,7,0,0 "STE13" "type IV dipeptidyl aminopeptidase" ytyjl095w - 11,1,0,0 "BCK1" "ser/thr protein kinase of the MEKK family" 14,1,3,0 "BCK1" "ser/thr protein kinase of the MEKK family" 14,4,3,1 "BCK1" "ser/thr protein kinase of the MEKK family" 3,3,1,0 "BCK1" "ser/thr protein kinase of the MEKK family" 40,3,0,0 "BCK1" "ser/thr protein kinase of the MEKK family" ytykr063c - 14,4,3,1 "LAS1" "involved in cell morphogenesis, cytoskeletal regulation and bud formation" 3,3,1,0 "LAS1" "involved in cell morphogenesis, cytoskeletal regulation and bud formation" 40,10,0,0 "LAS1" "involved in cell morphogenesis, cytoskeletal regulation and bud formation" ytyjl176c 1,5,4,0 "SWI3" "transcription regulatory protein" 14,4,3,3 "SWI3" "transcription regulatory protein" 4,5,1,4 "SWI3" "transcription regulatory protein" 40,10,0,0 "SWI3" "transcription regulatory protein" ytybr260c - 10,1,99,0 "RGD1" "similarity to C.elegans GTPase-activating protein" ytypr009w - 8,99,0,0 "null" "similarity to sterol uptake protein SUT1P" ytydr334w 4,5,1,4 "SWR1" "DEAH-box protein, putative RNA helicase" ytypr104c 4,5,1,4 "FHL1" "transcriptional activator of the forkhead/hnf3 family" 40,10,0,0 "FHL1" "transcriptional activator of the forkhead/hnf3 family" ytygl130w 4,5,5,0 "CEG1" "mRNA guanylyltransferase (mRNA capping enzyme, alpha subunit)" 40,10,0,0 "CEG1" "mRNA guanylyltransferase (mRNA capping enzyme, alpha subunit)" ytymr072w - 3,1,3,0 "ABF2" "high mobility group protein" 3,1,5,0 "ABF2" "high mobility group protein" 30,16,0,0 "ABF2" "high mobility group protein" 40,10,3,0 "ABF2" "high mobility group protein" 40,16,0,0 "ABF2" "high mobility group protein" ytybr253w 1,1,4,0 "SRB6" "DNA-directed RNA polymerase II suppressor protein" 1,5,4,0 "SRB6" "DNA-directed RNA polymerase II suppressor protein" 14,4,3,3 "SRB6" "DNA-directed RNA polymerase II suppressor protein" 14,4,3,5 "SRB6" "DNA-directed RNA polymerase II suppressor protein" 4,5,1,1 "SRB6" "DNA-directed RNA polymerase II suppressor protein" 40,10,0,0 "SRB6" "DNA-directed RNA polymerase II suppressor protein" ytyor241w - 1,7,1,0 "MET7" "tetrahydrofolylpolyglutamate synthase" ytycr037c - 1,4,7,0 "PHO87" "member of the phosphate permease family" 13,1,3,3 "PHO87" "member of the phosphate permease family" 67,4,7,0 "PHO87" "member of the phosphate permease family" ytydr335w - 14,4,3,3 "MSN5" "multicopy supressor of SNF1 mutation" 8,1,0,0 "MSN5" "multicopy supressor of SNF1 mutation" ytypr032w - 14,4,3,1 "SRO7" "polarized exocytosis by regulating SNARE function" 30,4,0,0 "SRO7" "polarized exocytosis by regulating SNARE function" 40,3,0,0 "SRO7" "polarized exocytosis by regulating SNARE function" 8,16,0,0 "SRO7" "polarized exocytosis by regulating SNARE function" ytycr038c - 14,4,3,1 "BUD5" "GDP/GTP exchange factor for RSR1P/Bud1p" 40,2,0,0 "BUD5" "GDP/GTP exchange factor for RSR1P/Bud1p" ytygl212w - 30,25,0,0 "VAM7" "vacuolar morphogenesis protein" 40,25,0,0 "VAM7" "vacuolar morphogenesis protein" 40,3,0,0 "VAM7" "vacuolar morphogenesis protein" 8,13,0,0 "VAM7" "vacuolar morphogenesis protein" ytyol080c - 3,3,1,0 "REX4" "strong similarity to X.laevis XPMC2 protein and YGR276c" ytydr351w - 14,4,3,1 "SBE2" "bud growth protein" ytykl070w 4,5,1,4 "null" "similarity to B.subtilis transcriptional regulatory protein" ytyjl193w - 8,7,0,0 "null" "similarity to SLY41P" ytygr129w 4,5,5,1 "SYF2" "synthetic lethal with CDC40" ytynr026c - 40,7,0,0 "SEC12" "GDP/GTP exchange factor for SAR1P" 8,19,0,0 "SEC12" "GDP/GTP exchange factor for SAR1P" 8,7,0,0 "SEC12" "GDP/GTP exchange factor for SAR1P" ytyjl013c - 3,3,1,3 "MAD3" "spindle-assembly checkpoint protein" 40,10,0,0 "MAD3" "spindle-assembly checkpoint protein" ytygl141w 4,5,5,0 "HUL5" "ubiquitin-protein ligase (E3)" ytylr018c - 8,1,0,0 "POM34" "component of nuclear pore complex (nucleoporin)" ytylr380w - 1,6,13,0 "CSR1" "phosphatidylinositol transfer protein" ytybr097w - 40,8,0,0 "VPS15" "ser/thr protein kinase" 40,9,0,0 "VPS15" "ser/thr protein kinase" 6,4,0,0 "VPS15" "ser/thr protein kinase" 8,13,0,0 "VPS15" "ser/thr protein kinase" 8,7,0,0 "VPS15" "ser/thr protein kinase" ytylr025w - 1,5,4,0 "SNF7" "class E Vps protein" 14,4,3,5 "SNF7" "class E Vps protein" 40,25,0,0 "SNF7" "class E Vps protein" 6,4,0,0 "SNF7" "class E Vps protein" 8,13,0,0 "SNF7" "class E Vps protein" ytykl072w 4,5,1,4 "STB6" "SIN3 binding protein" ytyhl020c 1,6,10,0 "OPI1" "negative regulator of phospholipid biosynthesis pathway" 4,5,1,4 "OPI1" "negative regulator of phospholipid biosynthesis pathway" 40,10,0,0 "OPI1" "negative regulator of phospholipid biosynthesis pathway" ytymr237w - 1,5,1,0 "null" "similarity to CHS6 protein" ytynr028w - 6,1,0,0 "CPR8" "Cyclophilin (peptidylprolyl cis-trans isomerase or PPIase)" ytykl074c 4,5,5,1 "MUD2" "pre-mRNA splicing factor" 40,10,0,0 "MUD2" "pre-mRNA splicing factor" ytykr084c - 40,3,0,0 "HBS1" "translation elongation factor eEF-1 alpha chain homolog" 5,4,0,0 "HBS1" "translation elongation factor eEF-1 alpha chain homolog" ytydr021w - 4,1,4,0 "FAL1" "involved in maturation of 18S rRNA" 40,10,0,0 "FAL1" "involved in maturation of 18S rRNA" ytydr195w 4,5,5,0 "REF2" "RNA 3'-end formation protein" 40,10,0,0 "REF2" "RNA 3'-end formation protein" ytyjl024c - 8,19,0,0 "APS3" "AP-3 complex subunit, sigma3 subunit, 22 KD" ytyel056w 4,5,1,4 "HAT2" "subunit of the major yeast histone acetyltransferase" 40,3,0,0 "HAT2" "subunit of the major yeast histone acetyltransferase" 6,7,0,0 "HAT2" "subunit of the major yeast histone acetyltransferase" ytypr133c - 40,10,0,0 "IWS1" "similarity to C.elegans hypothetical protein" ytybr188c 4,5,5,1 "NTC20" "splicing factor" ytyhr120w - 3,1,5,0 "MSH1" "DNA mismatch repair protein, mitochondrial" 40,16,0,0 "MSH1" "DNA mismatch repair protein, mitochondrial" ytypl051w - 6,7,0,0 "ARL3" "ADP-ribosylation factor-like protein, member of the arf-sar family in the ras superfamily" 8,7,0,0 "ARL3" "ADP-ribosylation factor-like protein, member of the arf-sar family in the ras superfamily" ytydr017c 4,5,1,4 "KCS1" "potential transcription factor of the BZIP type" ytybr291c - 1,5,7,0 "CTP1" "citrate transport protein, mitochondrial (MCF)" 40,16,0,0 "CTP1" "citrate transport protein, mitochondrial (MCF)" 67,4,7,0 "CTP1" "citrate transport protein, mitochondrial (MCF)" 8,4,0,0 "CTP1" "citrate transport protein, mitochondrial (MCF)" ytygr091w 4,5,5,1 "PRP31" "pre-mRNA splicing protein" 40,10,0,0 "PRP31" "pre-mRNA splicing protein" ytyol089c 11,1,0,0 "HAL9" "transcriptional activator of ENA1" 4,5,1,4 "HAL9" "transcriptional activator of ENA1" 40,10,0,0 "HAL9" "transcriptional activator of ENA1" ytyor194c 4,5,1,1 "TOA1" "TFIIA subunit (transcription initiation factor), 32 kD" 40,10,0,0 "TOA1" "TFIIA subunit (transcription initiation factor), 32 kD" ytykl174c - 1,6,13,0 "null" "similarity to choline transport protein HNM1P" 67,10,0,0 "null" "similarity to choline transport protein HNM1P" 67,13,0,0 "null" "similarity to choline transport protein HNM1P" ytydr034c 1,1,4,0 "LYS14" "transcriptional activator of lysine pathway genes" 4,5,1,4 "LYS14" "transcriptional activator of lysine pathway genes" 40,10,0,0 "LYS14" "transcriptional activator of lysine pathway genes" ytydr107c - 40,22,0,0 "null" "strong similarity to EMP70 protein" 8,7,0,0 "null" "strong similarity to EMP70 protein" ytyml088w - 6,13,1,0 "UFO1" "involved in degradation of HO protein" ytycr077c 3,1,3,0 "PAT1" "topoisomerase II-associated protein" 3,1,5,0 "PAT1" "topoisomerase II-associated protein" 4,5,5,0 "PAT1" "topoisomerase II-associated protein" 40,3,0,0 "PAT1" "topoisomerase II-associated protein" ytybl103c 1,5,4,0 "RTG3" "bHLH/zip transcription factor that regulates CIT2 gene expression" 4,5,1,4 "RTG3" "bHLH/zip transcription factor that regulates CIT2 gene expression" 40,10,0,0 "RTG3" "bHLH/zip transcription factor that regulates CIT2 gene expression" ytydr448w 4,5,1,4 "ADA2" "general transcriptional adaptor or co-activator" 40,10,0,0 "ADA2" "general transcriptional adaptor or co-activator" ytypr072w 4,5,1,4 "NOT5" "component of the NOT protein complex" ytyjr047c - 40,3,0,0 "ANB1" "translation initiation factor eIF5A.2" 5,4,0,0 "ANB1" "translation initiation factor eIF5A.2" ytydr296w - 3,1,5,0 "MHR1" "Involved in mitochondrial homologous DNA recombination" ytyor290c 1,5,4,0 "SNF2" "component of SWI/SNF global transcription activator complex" 14,4,3,3 "SNF2" "component of SWI/SNF global transcription activator complex" 4,5,1,4 "SNF2" "component of SWI/SNF global transcription activator complex" 40,10,0,0 "SNF2" "component of SWI/SNF global transcription activator complex" ytymr021c 11,1,0,0 "MAC1" "metal binding activator" 4,5,1,4 "MAC1" "metal binding activator" 40,10,0,0 "MAC1" "metal binding activator" ytyhr119w - 14,4,3,5 "SET1" "involved in chromatin-mediated gene regulation" 3,1,9,5 "SET1" "involved in chromatin-mediated gene regulation" 3,3,1,0 "SET1" "involved in chromatin-mediated gene regulation" 30,1,0,0 "SET1" "involved in chromatin-mediated gene regulation" 30,10,3,0 "SET1" "involved in chromatin-mediated gene regulation" 40,10,0,0 "SET1" "involved in chromatin-mediated gene regulation" ytygr271w - 11,7,0,0 "SLH1" "strong similarity to S.pombe RNA helicase" ytydr473c 4,5,5,1 "PRP3" "essential splicing factor" 40,10,0,0 "PRP3" "essential splicing factor" 6,10,0,0 "PRP3" "essential splicing factor" ytydl028c - 3,3,1,0 "MPS1" "serine/threonine/tyrosine protein kinase" 3,3,2,0 "MPS1" "serine/threonine/tyrosine protein kinase" ytyjr137c - 1,1,1,0 "ECM17" "involved in cell wall biogenesis and architecture" 1,2,1,0 "ECM17" "involved in cell wall biogenesis and architecture" 30,1,0,0 "ECM17" "involved in cell wall biogenesis and architecture" ytyer169w 4,5,1,4 "RPH1" "similarity to human retinoblastoma binding protein 2" ytyir006c - 14,4,3,1 "PAN1" "actin-cytoskeleton assembly protein" 30,4,0,0 "PAN1" "actin-cytoskeleton assembly protein" 40,4,0,0 "PAN1" "actin-cytoskeleton assembly protein" 6,10,0,0 "PAN1" "actin-cytoskeleton assembly protein" 8,19,0,0 "PAN1" "actin-cytoskeleton assembly protein" 8,99,0,0 "PAN1" "actin-cytoskeleton assembly protein" ytyjl134w - 1,6,1,0 "LCB3" "sphingoid base-phosphate phosphatase" 11,1,0,0 "LCB3" "sphingoid base-phosphate phosphatase" ytykl186c - 4,7,0,0 "MTR2" "mRNA transport protein" 40,10,0,0 "MTR2" "mRNA transport protein" 8,1,0,0 "MTR2" "mRNA transport protein" ytymr277w 4,5,1,0 "FCP1" "TFIIF interacting component of CTD phosphatase" 40,10,0,0 "FCP1" "TFIIF interacting component of CTD phosphatase" ytydl109c - 1,6,4,0 "null" "strong similarity to hypothetical protein YGL144c" ytylr226w 3,3,1,0 "BUR2" "divergent CDK-cyclin complex" 4,5,1,4 "BUR2" "divergent CDK-cyclin complex" ytyjr058c - 40,9,0,0 "APS2" "AP-2 complex subunit, sigma2 subunit, 17 KD" 6,10,0,0 "APS2" "AP-2 complex subunit, sigma2 subunit, 17 KD" 8,19,0,0 "APS2" "AP-2 complex subunit, sigma2 subunit, 17 KD" ytydr213w 1,6,99,0 "UPC2" "regulatory protein involved in control of sterol uptake" 4,5,1,4 "UPC2" "regulatory protein involved in control of sterol uptake" ytydr206w - 3,1,3,0 "EBS1" "similarity to EST1 protein" ytygl002w - 6,4,0,0 "ERP6" "strong similarity to human gp25L2 protein" 8,99,0,0 "ERP6" "strong similarity to human gp25L2 protein" ytyjr138w - 3,99,0,0 "IML1" "similarity to C.elegans hypothetical protein T08A11.1" 30,10,0,0 "IML1" "similarity to C.elegans hypothetical protein T08A11.1" ytydr054c - 1,1,4,0 "CDC34" "E2 ubiquitin-conjugating enzyme" 1,5,4,0 "CDC34" "E2 ubiquitin-conjugating enzyme" 3,1,3,0 "CDC34" "E2 ubiquitin-conjugating enzyme" 3,3,1,0 "CDC34" "E2 ubiquitin-conjugating enzyme" 40,10,0,0 "CDC34" "E2 ubiquitin-conjugating enzyme" 6,13,1,0 "CDC34" "E2 ubiquitin-conjugating enzyme" 6,7,0,0 "CDC34" "E2 ubiquitin-conjugating enzyme" ytyfr055w - 1,1,1,0 "null" "strong similarity to beta-cystathionases" ytymr293c - 1,2,1,0 "null" "similarity to amidases" ytyjl129c - 13,1,1,99 "TRK1" "potassium transport protein TRK1P, high-affinity" 40,2,0,0 "TRK1" "potassium transport protein TRK1P, high-affinity" 67,4,1,2 "TRK1" "potassium transport protein TRK1P, high-affinity" 8,19,0,0 "TRK1" "potassium transport protein TRK1P, high-affinity" ytylr148w - 40,25,0,0 "PEP3" "vacuolar membrane protein" 6,4,0,0 "PEP3" "vacuolar membrane protein" 8,7,0,0 "PEP3" "vacuolar membrane protein" ytylr316c - 4,3,6,0 "TAD3" "subunit of tRNA-specific adenosine-34 deaminase" ytyfl047w - 14,1,3,0 "RGD2" "GTPase activating protein" 62,2,5,0 "RGD2" "GTPase activating protein" ytykl015w 1,1,4,0 "PUT3" "positive activator of the proline utilisation pathway" 4,5,1,4 "PUT3" "positive activator of the proline utilisation pathway" 40,10,0,0 "PUT3" "positive activator of the proline utilisation pathway" ytyjr075w - 1,5,1,0 "HOC1" "suppressor of PKC1" 14,1,0,0 "HOC1" "suppressor of PKC1" 14,4,3,1 "HOC1" "suppressor of PKC1" 30,1,0,0 "HOC1" "suppressor of PKC1" 40,8,0,0 "HOC1" "suppressor of PKC1" 6,7,0,0 "HOC1" "suppressor of PKC1" ytylr411w - 13,1,1,1 "CTR3" "copper transport protein" 67,4,1,1 "CTR3" "copper transport protein" ytymr288w 4,5,5,1 "HSH155" "component of a multiprotein splicing factor" ytygl194c - 3,1,9,5 "HOS2" "putative histone deacetylase" 6,7,0,0 "HOS2" "putative histone deacetylase" ytypl084w - 11,1,0,0 "BRO1" "required for normal response to nutrient limitation" 13,11,3,1 "BRO1" "required for normal response to nutrient limitation" ytyor043w - 14,1,0,0 "WHI2" "growth regulation protein" ytylr245c - 1,3,4,0 "CDD1" "cytidine deaminase" ytycl011c - 40,10,3,0 "GBP2" "potential telomere-associated protein" ytyjl154c - 30,7,0,0 "VPS35" "protein-sorting protein, vacuolar" 40,22,0,0 "VPS35" "protein-sorting protein, vacuolar" 40,25,0,0 "VPS35" "protein-sorting protein, vacuolar" 40,8,0,0 "VPS35" "protein-sorting protein, vacuolar" 6,4,0,0 "VPS35" "protein-sorting protein, vacuolar" 8,13,0,0 "VPS35" "protein-sorting protein, vacuolar" 8,7,0,0 "VPS35" "protein-sorting protein, vacuolar" ytynl317w 4,5,5,5 "PFS2" "polyadenylation factor I subunit 2 required for mRNA 3'-end processing, bridges two mRNA 3'-end processing factors" ytylr319c - 14,4,3,1 "BUD6" "bud site selection protein" 40,4,0,0 "BUD6" "bud site selection protein" ytyal010c - 40,16,0,0 "MDM10" "involved in mitochondrial morphology and inheritance" ytykr027w - 1,5,1,0 "null" "strong similarity to CHS6P" ytylr239c - 1,7,0,0 "LIP2" "lipoic acid ligase" ytyar020c - 11,1,0,0 "PAU7" "strong similarity to members of the SRP1P/TIP1P family" ytymr109w - 14,4,3,1 "MYO5" "myosin I" 40,4,0,0 "MYO5" "myosin I" 8,22,0,0 "MYO5" "myosin I" ytyol042w 4,5,99,0 "NGL1" "similarity to CCR4 protein" ytyor126c - 1,5,1,0 "IAH1" "isoamyl acetate hydrolytic enzyme" 2,16,0,0 "IAH1" "isoamyl acetate hydrolytic enzyme" ytyjl156c - 13,11,3,1 "SSY5" "part of an extracellular amino acid sensor" ytyor047c 1,5,4,0 "STD1" "dosage-dependent modulator of glucose repression" 4,5,1,4 "STD1" "dosage-dependent modulator of glucose repression" ytycl007c - 30,1,0,0 "CWH36" "affects the mannoprotein layer of the cell wall" ytypl002c - 1,5,4,0 "SNF8" "involved in glucose derepression" ytyor127w - 14,4,3,1 "RGA1" "RHO-type GTPase-activating protein for CDC42P" 14,4,3,3 "RGA1" "RHO-type GTPase-activating protein for CDC42P" ytybr227c - 40,16,0,0 "MCX1" "similarity to E.coli ATP-binding protein clpX" 6,10,0,0 "MCX1" "similarity to E.coli ATP-binding protein clpX" 6,13,0,0 "MCX1" "similarity to E.coli ATP-binding protein clpX" ytyil106w 3,3,1,0 "MOB1" "required for completion of mitosis and maintenance of ploidy" 4,5,1,4 "MOB1" "required for completion of mitosis and maintenance of ploidy" ytygl018c - 2,13,0,0 "JAC1" "molecular chaperone" 40,16,0,0 "JAC1" "molecular chaperone" 6,1,0,0 "JAC1" "molecular chaperone" ytydr403w - 14,4,3,5 "DIT1" "spore wall maturation protein" ytyjl078c - 14,4,3,3 "PRY3" "strong similarity to the plant PR-1 class of pathogen related proteins" ytyor070c - 8,7,0,0 "GYP1" "GTPase activating protein for YPT1P and SEC4P" ytyor216c - 40,8,0,0 "RUD3" "suppressor of USO1-1 transport defect" 8,7,0,0 "RUD3" "suppressor of USO1-1 transport defect" ytynl329c - 40,19,0,0 "PEX6" "peroxisomal assembly protein" 40,3,0,0 "PEX6" "peroxisomal assembly protein" 6,10,0,0 "PEX6" "peroxisomal assembly protein" ytygr036c - 30,1,0,0 "CAX4" "required for full levels of dolichol-linked oligosaccharides in the endoplasmic reticulum" 6,7,0,0 "CAX4" "required for full levels of dolichol-linked oligosaccharides in the endoplasmic reticulum" ytyer122c 3,3,1,0 "GLO3" "zinc finger protein" 4,5,1,4 "GLO3" "zinc finger protein" 40,10,0,0 "GLO3" "zinc finger protein" ytyor217w - 3,1,3,0 "RFC1" "DNA replication factor C, 95 KD subunit" 3,3,1,0 "RFC1" "DNA replication factor C, 95 KD subunit" 40,10,0,0 "RFC1" "DNA replication factor C, 95 KD subunit" ytypl259c - 30,8,0,0 "APM1" "AP-1 complex subunit, mu1 subunit, 54 KD" 40,9,0,0 "APM1" "AP-1 complex subunit, mu1 subunit, 54 KD" 6,4,0,0 "APM1" "AP-1 complex subunit, mu1 subunit, 54 KD" 8,7,0,0 "APM1" "AP-1 complex subunit, mu1 subunit, 54 KD" ytydr318w - 40,10,3,0 "MCM21" "involved in minichromosome maintenance" ytynr006w - 40,22,0,0 "VPS27" "vacuolar protein sorting-associated protein" 6,4,0,0 "VPS27" "vacuolar protein sorting-associated protein" 8,13,0,0 "VPS27" "vacuolar protein sorting-associated protein" 8,7,0,0 "VPS27" "vacuolar protein sorting-associated protein" ytycr042c 4,5,1,1 "TSM1" "component of TFIID complex" 4,5,1,4 "TSM1" "component of TFIID complex" 40,10,0,0 "TSM1" "component of TFIID complex" Validation Accuracy: 38/123 (30.89%) Validation Frequency class '4/5/0/0': 116/851 (13.63%) Evaluation on propertest data (1292 items): ytymr137c - 3,1,5,1 "PSO2" "DNA repair protein" 40,10,0,0 "PSO2" "DNA repair protein" ytydl236w - 1,4,99,0 "PHO13" "4-nitrophenylphosphatase" 40,3,0,0 "PHO13" "4-nitrophenylphosphatase" ytydr159w 1,1,4,0 "SAC3" "leucine permease transcriptional regulator" 4,5,1,4 "SAC3" "leucine permease transcriptional regulator" 40,10,0,0 "SAC3" "leucine permease transcriptional regulator" ytyll003w - 11,1,0,0 "SFI1" "similarity to Xenopus laevis XCAP-C" 3,3,1,0 "SFI1" "similarity to Xenopus laevis XCAP-C" ytybr166c - 1,1,1,0 "TYR1" "prephenate dehydrogenase (NADP+)" 40,3,0,0 "TYR1" "prephenate dehydrogenase (NADP+)" ytyal032c 4,5,5,1 "PRP45" "pre-mRNA splicing factor" ytyhr004c - 14,4,3,5 "NEM1" "required for nuclear morphology" 3,3,2,0 "NEM1" "required for nuclear morphology" 30,10,0,0 "NEM1" "required for nuclear morphology" 40,10,0,0 "NEM1" "required for nuclear morphology" 40,7,0,0 "NEM1" "required for nuclear morphology" ytygl044c 4,5,5,0 "RNA15" "component of pre-mRNA 3'-end processing factor CF I" 40,10,0,0 "RNA15" "component of pre-mRNA 3'-end processing factor CF I" ytygr047c - 4,1,1,0 "TFC4" "TFIIIC (transcription initiation factor) subunit, 131 kD" 4,3,1,0 "TFC4" "TFIIIC (transcription initiation factor) subunit, 131 kD" 40,10,0,0 "TFC4" "TFIIIC (transcription initiation factor) subunit, 131 kD" ytycr044c - 13,1,1,1 "PER1" "involved in manganese homeostasis" 40,25,0,0 "PER1" "involved in manganese homeostasis" ytykr064w 4,5,1,4 "null" "weak similarity to transcription factors" 40,10,0,0 "null" "weak similarity to transcription factors" ytymr153w - 8,1,0,0 "NUP53" "component of the karyopherin docking complex of the nuclear pore complex" ytylr450w - 1,6,1,0 "HMG2" "3-hydroxy-3-methylglutaryl-coenzyme A reductase 2" 40,7,0,0 "HMG2" "3-hydroxy-3-methylglutaryl-coenzyme A reductase 2" ytybr087w - 3,1,3,0 "RFC5" "DNA replication factor C, 40 KD subunit" 3,3,1,3 "RFC5" "DNA replication factor C, 40 KD subunit" 40,10,0,0 "RFC5" "DNA replication factor C, 40 KD subunit" ytydr416w 3,3,1,0 "SYF1" "synthetic lethal with CDC40" 4,5,5,1 "SYF1" "synthetic lethal with CDC40" ytyhr099w 4,5,1,4 "TRA1" "component of the Ada-Spt transcriptional regulatory complex" ytyil134w - 1,7,10,0 "FLX1" "FAD carrier protein (MCF), mitochondrial" 40,16,0,0 "FLX1" "FAD carrier protein (MCF), mitochondrial" 67,99,0,0 "FLX1" "FAD carrier protein (MCF), mitochondrial" 8,4,0,0 "FLX1" "FAD carrier protein (MCF), mitochondrial" ytyor163w - 11,7,99,0 "DDP1" "diadenosine hexaphosphate (Ap6A) hydrolase" ytyjl186w - 1,5,1,3 "MNN5" "putative mannosyltransferase" ytyhl004w - 40,16,0,0 "MRP4" "ribosomal protein of the small subunit, mitochondrial" 5,1,0,0 "MRP4" "ribosomal protein of the small subunit, mitochondrial" ytyol068c 14,4,3,3 "HST1" "silencing protein" 4,5,1,4 "HST1" "silencing protein" ytydr020c - 1,3,1,0 "null" "weak similarity to uridine kinases and phosphoribulokinases" ytybr265w - 1,6,1,0 "TSC10" "3-ketosphinganine reductase" 40,7,0,0 "TSC10" "3-ketosphinganine reductase" ytynl286w 4,5,5,1 "CUS2" "cold sensitive U2 snRNA Suppressor" ytydl098c 4,5,5,1 "SNU23" "Putative RNA binding zinc finger protein" ytydl005c 4,5,1,0 "MED2" "transcriptional regulation mediator" 40,10,0,0 "MED2" "transcriptional regulation mediator" ytyfr031c - 3,3,1,0 "SMC2" "chromosome segregation protein" 40,10,0,0 "SMC2" "chromosome segregation protein" ytypl204w - 3,1,5,1 "HRR25" "casein kinase I, ser/thr/tyr protein kinase" 3,3,2,0 "HRR25" "casein kinase I, ser/thr/tyr protein kinase" 40,10,0,0 "HRR25" "casein kinase I, ser/thr/tyr protein kinase" ytyll042c - 6,7,11,0 "APG10" "protein-conjugating enzyme essential for autophagy" ytyfl017c - 3,3,1,0 "GNA1" "essential acetyltransferase" 40,1,0,0 "GNA1" "essential acetyltransferase" ytyhr108w - 8,7,0,0 "GGA2" "Arf-binding protein" ytydr026c 4,5,1,4 "null" "strong similarity to DNA-binding protein REB1P" ytyer157w - 40,8,0,0 "SEC34" "required for vesicle tethering to the yeast Golgi apparatus" 8,7,0,0 "SEC34" "required for vesicle tethering to the yeast Golgi apparatus" ytybr112c 4,5,1,4 "CYC8" "general repressor of transcription" 40,10,0,0 "CYC8" "general repressor of transcription" ytyir001c 4,5,99,0 "SGN1" "similarity to D.melanogaster RNA binding protein" ytylr127c - 3,3,1,0 "APC2" "component of the anaphase promoting complex" 6,13,1,0 "APC2" "component of the anaphase promoting complex" 6,7,0,0 "APC2" "component of the anaphase promoting complex" ytygr166w - 1,5,4,0 "KRE11" "beta-glucan synthesis-associated protein" 40,3,0,0 "KRE11" "beta-glucan synthesis-associated protein" 40,8,0,0 "KRE11" "beta-glucan synthesis-associated protein" 8,7,0,0 "KRE11" "beta-glucan synthesis-associated protein" ytynr056c - 1,6,13,0 "BIO5" "similarity to choline transport protein HNM1P" 67,10,0,0 "BIO5" "similarity to choline transport protein HNM1P" 67,13,0,0 "BIO5" "similarity to choline transport protein HNM1P" ytyjr053w - 3,3,1,3 "BFA1" "spindle assembly checkpoint protein" ytyil173w - 6,4,0,0 "VTH1" "strong similarity to VTH2P and PEP1P, potential membrane glycoprotein" ytyhr205w - 13,11,3,1 "SCH9" "serine/threonine protein kinase involved in stress response and nutrient-sensing signaling pathway" 14,1,0,0 "SCH9" "serine/threonine protein kinase involved in stress response and nutrient-sensing signaling pathway" 3,3,1,0 "SCH9" "serine/threonine protein kinase involved in stress response and nutrient-sensing signaling pathway" ytybr288c - 8,19,0,0 "APM3" "AP-3 complex subunit, mu3 subunit, 55 KD" ytynl214w - 40,19,0,0 "PEX17" "component of the peroxisomal protein translocation - peroxin" 8,10,0,0 "PEX17" "component of the peroxisomal protein translocation - peroxin" ytydr108w - 14,4,3,5 "GSG1" "sporulation specific protein" 3,3,2,0 "GSG1" "sporulation specific protein" 40,8,0,0 "GSG1" "sporulation specific protein" 8,7,0,0 "GSG1" "sporulation specific protein" ytylr129w - 3,3,1,0 "DIP2" "DOM34P-interacting protein" 3,3,2,0 "DIP2" "DOM34P-interacting protein" ytybr130c - 14,4,3,3 "SHE3" "required for mother cell-specific expression of HO" 40,3,0,0 "SHE3" "required for mother cell-specific expression of HO" 40,4,0,0 "SHE3" "required for mother cell-specific expression of HO" ytydr538w - 11,7,0,0 "PAD1" "phenylacrylic acid decarboxylase" ytypr162c 14,4,3,3 "ORC4" "origin recognition complex, 56 KD subunit" 3,1,3,0 "ORC4" "origin recognition complex, 56 KD subunit" 4,5,1,4 "ORC4" "origin recognition complex, 56 KD subunit" 40,10,0,0 "ORC4" "origin recognition complex, 56 KD subunit" ytypr068c 4,5,99,0 "HOS1" "similarity to human histone deacetylase HD1" ytybr210w - 14,4,3,1 "null" "strong similarity to D.melanogaster cornichon protein" ytydr045c 4,5,1,1 "RPC11" "RNA polymerase III subunit C11, required for RNA cleavage activity and transcription termination" ytyer002w - 40,3,0,0 "NOP16" "weak similarity to chicken microfibril-associated protein" ytydl043c 4,5,5,1 "PRP11" "pre-mRNA splicing factor" 40,10,0,0 "PRP11" "pre-mRNA splicing factor" ytylr240w - 1,6,1,0 "VPS34" "phosphatidylinositol 3-kinase" 10,1,99,0 "VPS34" "phosphatidylinositol 3-kinase" 40,3,0,0 "VPS34" "phosphatidylinositol 3-kinase" 40,8,0,0 "VPS34" "phosphatidylinositol 3-kinase" 40,9,0,0 "VPS34" "phosphatidylinositol 3-kinase" 8,19,0,0 "VPS34" "phosphatidylinositol 3-kinase" ytynl218w - 3,1,3,0 "MGS1" "similarity to E.coli hypothetical protein in serS 5'region" 30,16,0,0 "MGS1" "similarity to E.coli hypothetical protein in serS 5'region" ytyjr152w - 40,2,0,0 "DAL5" "allantoate permease" 67,19,0,0 "DAL5" "allantoate permease" 8,19,0,0 "DAL5" "allantoate permease" ytynl059c - 40,10,0,0 "ARP5" "Actin-related protein" 40,4,0,0 "ARP5" "Actin-related protein" ytylr242c - 40,2,0,0 "ARV1" "involved in sterol uptake and distribution into the plasma membrane" ytygr013w 4,5,5,1 "SNU71" "associated with U1 snRNP, no counterpart in mammalian U1 snRNP" 40,10,0,0 "SNU71" "associated with U1 snRNP, no counterpart in mammalian U1 snRNP" ytykr031c - 1,6,4,0 "SPO14" "phospholipase D" 14,4,3,5 "SPO14" "phospholipase D" 3,3,2,0 "SPO14" "phospholipase D" ytypl228w 4,5,5,0 "CET1" "RNA 5'-triphosphatase (mRNA capping enzyme, beta subunit)" ytyer005w - 6,7,0,0 "YND1" "Yeast Nucleoside Diphosphatase" ytymr106c - 3,1,5,1 "YKU80" "component of DNA end-joining repair pathway" 40,10,0,0 "YKU80" "component of DNA end-joining repair pathway" ytyar002w - 8,1,0,0 "NUP60" "nuclear pore protein" ytynl314w 1,3,13,0 "DAL82" "transcriptional activator for allantoin catabolic genes" 4,5,1,4 "DAL82" "transcriptional activator for allantoin catabolic genes" 40,10,0,0 "DAL82" "transcriptional activator for allantoin catabolic genes" ytydr143c - 14,4,3,3 "SAN1" "mating-type regulation protein" ytyel003w - 30,4,0,0 "GIM4" "Gim complex component" 40,3,0,0 "GIM4" "Gim complex component" 6,1,0,0 "GIM4" "Gim complex component" ytydr477w - 1,5,4,0 "SNF1" "carbon catabolite derepressing ser/thr protein kinase" 11,1,0,0 "SNF1" "carbon catabolite derepressing ser/thr protein kinase" 40,3,0,0 "SNF1" "carbon catabolite derepressing ser/thr protein kinase" ytygl013c 11,7,0,0 "PDR1" "transcription factor" 4,5,1,4 "PDR1" "transcription factor" 40,10,0,0 "PDR1" "transcription factor" ytybr150c - 4,99,0,0 "TBS1" "weak similarity to transcription factors" 40,10,0,0 "TBS1" "weak similarity to transcription factors" ytyor211c - 40,16,0,0 "MGM1" "dynamin-like protein" ytydr320c - 8,7,0,0 "SWA2" "clathrin-binding protein required for normal clathrin function and for uncoating of clathrin-coated vesicles" ytyil009w - 1,6,1,0 "FAA3" "acyl CoA synthase" 1,6,7,0 "FAA3" "acyl CoA synthase" ytykl112w 1,1,4,0 "ABF1" "ARS-binding factor" 1,2,4,0 "ABF1" "ARS-binding factor" 3,1,3,0 "ABF1" "ARS-binding factor" 3,3,2,0 "ABF1" "ARS-binding factor" 4,5,1,4 "ABF1" "ARS-binding factor" 40,10,0,0 "ABF1" "ARS-binding factor" ytybr058c - 6,13,1,0 "UBP14" "ubiquitin specific protease" ytybr152w 30,10,0,0 "SPP381" "Suppressor of Pre-mRNA Processing mutant" 4,5,5,1 "SPP381" "Suppressor of Pre-mRNA Processing mutant" ytyol116w 1,5,4,0 "MSN1" "transcriptional activator" 30,1,0,0 "MSN1" "transcriptional activator" 4,5,1,4 "MSN1" "transcriptional activator" 40,10,0,0 "MSN1" "transcriptional activator" ytydr227w 11,1,0,0 "SIR4" "silencing regulatory and DNA-repair protein" 14,10,0,0 "SIR4" "silencing regulatory and DNA-repair protein" 14,4,3,3 "SIR4" "silencing regulatory and DNA-repair protein" 3,1,5,1 "SIR4" "silencing regulatory and DNA-repair protein" 4,5,1,4 "SIR4" "silencing regulatory and DNA-repair protein" 40,10,0,0 "SIR4" "silencing regulatory and DNA-repair protein" ytygr113w - 3,3,3,0 "DAM1" "essential mitotic spindle pole protein" 40,4,0,0 "DAM1" "essential mitotic spindle pole protein" ytydr228c 4,5,5,0 "PCF11" "component of pre-mRNA 3'-end processing factor CF I" 40,10,0,0 "PCF11" "component of pre-mRNA 3'-end processing factor CF I" ytydl080c 1,1,10,0 "THI3" "positive regulation factor of thiamin metabolism" 1,7,7,0 "THI3" "positive regulation factor of thiamin metabolism" 4,5,1,4 "THI3" "positive regulation factor of thiamin metabolism" ytydl066w - 1,5,1,0 "IDP1" "isocitrate dehydrogenase (NADP+), mitochondrial" 2,10,0,0 "IDP1" "isocitrate dehydrogenase (NADP+), mitochondrial" 40,16,0,0 "IDP1" "isocitrate dehydrogenase (NADP+), mitochondrial" ytybr156c - 3,3,1,0 "SLI15" "Mitotic spindle protein involved in chromosome segregation" ytynl271c - 14,4,3,1 "BNI1" "regulator of budding" 14,4,3,3 "BNI1" "regulator of budding" 3,3,3,0 "BNI1" "regulator of budding" 40,4,0,0 "BNI1" "regulator of budding" ytydr499w - 3,1,3,0 "LCD1" "cell cycle checkpoint protein" 3,1,5,0 "LCD1" "cell cycle checkpoint protein" 3,3,1,3 "LCD1" "cell cycle checkpoint protein" 6,7,3,0 "LCD1" "cell cycle checkpoint protein" ytyor057w - 3,3,1,0 "SGT1" "suppressor of G2 allele of SKP1" 6,13,1,0 "SGT1" "suppressor of G2 allele of SKP1" ytyer109c 14,4,3,1 "FLO8" "required for diploid filamentous growth" 4,5,1,4 "FLO8" "required for diploid filamentous growth" 40,10,0,0 "FLO8" "required for diploid filamentous growth" ytyer029c 4,5,5,1 "SMB1" "associated with U1 snRNP as part of the Sm-core that is common to all spliceosomal snRNPs" 40,10,0,0 "SMB1" "associated with U1 snRNP as part of the Sm-core that is common to all spliceosomal snRNPs" ytykl213c - 1,6,4,0 "DOA1" "involved in ubiquitin-dependent proteolysis" 6,13,1,0 "DOA1" "involved in ubiquitin-dependent proteolysis" ytycl032w - 13,11,3,7 "STE50" "pheromone response pathway protein" 14,4,3,3 "STE50" "pheromone response pathway protein" ytyml062c - 40,3,0,0 "MFT1" "mitochondrial fusion target protein" 6,4,0,0 "MFT1" "mitochondrial fusion target protein" 8,4,0,0 "MFT1" "mitochondrial fusion target protein" ytydr422c - 1,5,4,0 "SIP1" "multicopy suppressor of SNF1" ytynr008w - 1,6,1,0 "LRO1" "a lecithin cholesterol acyltransferase-like gene, mediates diacylglycerol esterification" ytypr031w - 4,99,0,0 "null" "similarity to human zinc-finger protein BR140" ytydr088c 4,5,5,1 "SLU7" "pre-mRNA splicing factor affecting 3' splice site choice" 40,10,0,0 "SLU7" "pre-mRNA splicing factor affecting 3' splice site choice" ytylr363c - 1,3,16,0 "NMD4" "NAM7P interacting protein" ytykr072c 3,3,1,0 "SIS2" "involved in cell cycle-specific gene expression" 4,5,1,4 "SIS2" "involved in cell cycle-specific gene expression" 40,10,0,0 "SIS2" "involved in cell cycle-specific gene expression" ytyml064c - 10,1,99,0 "TEM1" "GTP-binding protein of the RAS superfamily" 3,3,1,0 "TEM1" "GTP-binding protein of the RAS superfamily" ytyor076c - 1,3,16,1 "SKI7" "GTPase with function in 3'-to-5' degradation of mRNA" ytyfr005c 4,5,5,1 "SAD1" "SnRNP assembly defective" ytygl133w 4,5,1,4 "ITC1" "subunit of ISW2 chromatin remodelling complex" 40,10,3,0 "ITC1" "subunit of ISW2 chromatin remodelling complex" ytyil048w - 67,28,0,0 "NEO1" "ATPase whose overproduction confers neomycin resistance" 67,50,22,0 "NEO1" "ATPase whose overproduction confers neomycin resistance" ytyil063c - 40,10,0,0 "YRB2" "involved in nuclear protein export" 8,1,0,0 "YRB2" "involved in nuclear protein export" ytydr265w - 40,19,0,0 "PEX10" "peroxisomal assembly protein - peroxin" 6,10,0,0 "PEX10" "peroxisomal assembly protein - peroxin" ytynl103w 1,1,4,0 "MET4" "transcriptional activator of sulfur metabolism" 1,2,4,0 "MET4" "transcriptional activator of sulfur metabolism" 4,5,1,4 "MET4" "transcriptional activator of sulfur metabolism" 40,10,0,0 "MET4" "transcriptional activator of sulfur metabolism" ytydr440w - 3,3,1,0 "DOT1" "putative ATPase" ytynr027w - 1,7,4,0 "BUD17" "similarity to human pyridoxal kinase" ytyml081w 4,5,1,4 "null" "strong similarity to ZMS1 protein" ytyor159c 4,5,5,1 "SME1" "spliceosomal snRNA-associated Sm core protein required for mRNA splicing, also likely associated with telomerase TLC1 RNA" 40,10,0,0 "SME1" "spliceosomal snRNA-associated Sm core protein required for mRNA splicing, also likely associated with telomerase TLC1 RNA" ytybr192w - 2,13,0,0 "RIM2" "mitochondrial carrier protein (MCF)" 40,16,0,0 "RIM2" "mitochondrial carrier protein (MCF)" 67,16,0,0 "RIM2" "mitochondrial carrier protein (MCF)" 8,4,0,0 "RIM2" "mitochondrial carrier protein (MCF)" ytyor319w 4,5,5,1 "HSH49" "essential yeast splicing factor" 40,10,0,0 "HSH49" "essential yeast splicing factor" ytykl139w 4,5,1,4 "CTK1" "carboxy-terminal domain (CTD) kinase, alpha subunit" 40,10,0,0 "CTK1" "carboxy-terminal domain (CTD) kinase, alpha subunit" ytyor334w 4,5,5,1 "MRS2" "RNA splicing protein and member of the mitochondrial carrier family (MCF)" 40,16,0,0 "MRS2" "RNA splicing protein and member of the mitochondrial carrier family (MCF)" ytynl201c - 1,5,4,0 "null" "weak similarity to pleiotropic drug resistance control protein PDR6" ytymr261c - 1,5,1,0 "TPS3" "alpha,alpha-trehalose-phosphate synthase, 115 KD subunit" 2,19,0,0 "TPS3" "alpha,alpha-trehalose-phosphate synthase, 115 KD subunit" 40,3,0,0 "TPS3" "alpha,alpha-trehalose-phosphate synthase, 115 KD subunit" ytydr363w 4,5,1,4 "ESC2" "involved in silencing" ytyil147c - 1,5,4,0 "SLN1" "two-component signal transducer" 10,5,0,0 "SLN1" "two-component signal transducer" 11,1,0,0 "SLN1" "two-component signal transducer" 13,11,3,13 "SLN1" "two-component signal transducer" 40,2,0,0 "SLN1" "two-component signal transducer" 63,1,0,0 "SLN1" "two-component signal transducer" ytynl027w 11,1,0,0 "CRZ1" "calcineurin responsive zinc-finger" 13,1,1,99 "CRZ1" "calcineurin responsive zinc-finger" 4,5,1,4 "CRZ1" "calcineurin responsive zinc-finger" ytygl058w - 14,4,3,5 "RAD6" "E2 ubiquitin-conjugating enzyme" 3,1,3,0 "RAD6" "E2 ubiquitin-conjugating enzyme" 3,1,5,1 "RAD6" "E2 ubiquitin-conjugating enzyme" 4,99,0,0 "RAD6" "E2 ubiquitin-conjugating enzyme" 40,10,0,0 "RAD6" "E2 ubiquitin-conjugating enzyme" 6,13,0,0 "RAD6" "E2 ubiquitin-conjugating enzyme" 6,7,0,0 "RAD6" "E2 ubiquitin-conjugating enzyme" ytydr110w - 3,1,3,0 "FOB1" "DNA replication fork blocking protein" 3,1,5,0 "FOB1" "DNA replication fork blocking protein" 40,3,0,0 "FOB1" "DNA replication fork blocking protein" ytybr102c - 40,3,0,0 "EXO84" "exocyst protein essential for secretion" 8,16,0,0 "EXO84" "exocyst protein essential for secretion" ytymr168c - 3,3,1,0 "CEP3" "kinetochore protein complex, 71 KD subunit" 40,10,3,0 "CEP3" "kinetochore protein complex, 71 KD subunit" ytygl153w - 40,19,0,0 "PEX14" "peroxisomal protein involved in protein import - peroxin" 6,4,0,0 "PEX14" "peroxisomal protein involved in protein import - peroxin" 8,10,0,0 "PEX14" "peroxisomal protein involved in protein import - peroxin" ytymr263w 14,1,0,0 "SAP30" "subunit of the histone deacetylase B complex" 14,4,3,3 "SAP30" "subunit of the histone deacetylase B complex" 14,4,3,5 "SAP30" "subunit of the histone deacetylase B complex" 4,5,1,4 "SAP30" "subunit of the histone deacetylase B complex" ytykr001c - 40,8,0,0 "VPS1" "member of the dynamin family of GTPases" 6,4,0,0 "VPS1" "member of the dynamin family of GTPases" ytybr103w 11,1,0,0 "SIF2" "SIR4P interacting protein" 4,5,1,4 "SIF2" "SIR4P interacting protein" 40,10,0,0 "SIF2" "SIR4P interacting protein" ytypr070w 4,5,1,1 "MED1" "component of RNA polymerase II holoenzyme and mediator subcomplex" ytykl173w - 5,4,0,0 "SNU114" "U5 snRNP-specific protein" ytykl079w - 14,4,3,1 "SMY1" "kinesin-related protein" 40,4,0,0 "SMY1" "kinesin-related protein" 8,22,0,0 "SMY1" "kinesin-related protein" ytylr214w - 13,1,1,99 "FRE1" "ferric (and cupric) reductase" 40,2,0,0 "FRE1" "ferric (and cupric) reductase" ytypr057w 4,5,5,1 "BRR1" "involved in snRNP biogenesis" 40,10,0,0 "BRR1" "involved in snRNP biogenesis" ytyjl029c - 40,8,0,0 "VPS53" "subunit of VP52-54 complex, required for protein sorting at the yeast late Golgi" 8,7,0,0 "VPS53" "subunit of VP52-54 complex, required for protein sorting at the yeast late Golgi" ytylr215c - 3,3,1,0 "CDC123" "strong similarity to rat cell cycle progression related D123 protein" ytygl252c - 1,5,4,0 "RTG2" "retrograde regulation protein" 40,3,0,0 "RTG2" "retrograde regulation protein" ytycr092c - 3,1,5,0 "MSH3" "DNA mismatch repair protein" 40,10,0,0 "MSH3" "DNA mismatch repair protein" ytyjl044c - 8,16,0,0 "GYP6" "GTPase-activating protein" ytylr310c - 1,2,4,0 "CDC25" "GDP/GTP exchange factor for RAS1P and RAS2P" 1,3,13,0 "CDC25" "GDP/GTP exchange factor for RAS1P and RAS2P" 1,5,4,0 "CDC25" "GDP/GTP exchange factor for RAS1P and RAS2P" 13,1,1,1 "CDC25" "GDP/GTP exchange factor for RAS1P and RAS2P" 13,11,3,1 "CDC25" "GDP/GTP exchange factor for RAS1P and RAS2P" 3,3,1,0 "CDC25" "GDP/GTP exchange factor for RAS1P and RAS2P" 3,3,2,0 "CDC25" "GDP/GTP exchange factor for RAS1P and RAS2P" 40,2,0,0 "CDC25" "GDP/GTP exchange factor for RAS1P and RAS2P" 62,2,5,0 "CDC25" "GDP/GTP exchange factor for RAS1P and RAS2P" ytydr130c - 3,3,1,0 "FIN1" "weak similarity to sea urchin myosin heavy chain" ytyml010w 3,1,9,5 "SPT5" "transcription elongation protein" 4,5,1,1 "SPT5" "transcription elongation protein" 40,10,0,0 "SPT5" "transcription elongation protein" ytybl025w - 4,1,1,0 "RRN10" "RNA polymerase I-specific transcription initiation factor" 40,10,0,0 "RRN10" "RNA polymerase I-specific transcription initiation factor" ytyor009w - 11,1,0,0 "TIR4" "similarity to TIR1P and TIR2P" ytyjl140w 11,1,0,0 "RPB4" "DNA-directed RNA polymerase II, 32 kDa subunit" 4,5,1,1 "RPB4" "DNA-directed RNA polymerase II, 32 kDa subunit" 40,10,0,0 "RPB4" "DNA-directed RNA polymerase II, 32 kDa subunit" ytyhr135c - 11,1,0,0 "YCK1" "casein kinase I isoform" 14,1,0,0 "YCK1" "casein kinase I isoform" 14,4,3,1 "YCK1" "casein kinase I isoform" 3,3,3,0 "YCK1" "casein kinase I isoform" 40,2,0,0 "YCK1" "casein kinase I isoform" 8,7,0,0 "YCK1" "casein kinase I isoform" ytyjl126w - 1,2,1,0 "NIT2" "nitrilase" ytydr038c - 13,1,1,99 "ENA5" "P-type ATPase involved in Na+ efflux" 67,50,22,0 "ENA5" "P-type ATPase involved in Na+ efflux" ytyjl127c 4,5,1,4 "SPT10" "transcription regulatory protein" 40,10,0,0 "SPT10" "transcription regulatory protein" ytyor278w - 1,7,1,0 "HEM4" "uroporphyrinogen III synthase" ytypl139c 3,3,2,0 "UME1" "negative regulator of meiosis" 4,5,1,4 "UME1" "negative regulator of meiosis" 40,10,0,0 "UME1" "negative regulator of meiosis" ytyer184c 4,5,1,4 "null" "similarity to multidrug resistance proteins PDR3P and PDR1P" 40,10,0,0 "null" "similarity to multidrug resistance proteins PDR3P and PDR1P" ytymr285c - 2,16,0,0 "NGL2" "similarity to CCR4P" ytygr274c 3,1,9,5 "TAF145" "TFIID subunit (TBP-associated factor), 145 kD" 4,5,1,1 "TAF145" "TFIID subunit (TBP-associated factor), 145 kD" 40,10,0,0 "TAF145" "TFIID subunit (TBP-associated factor), 145 kD" ytyol023w - 30,1,0,0 "IFM1" "translation initiation factor 2, mitochondrial" 40,16,0,0 "IFM1" "translation initiation factor 2, mitochondrial" 5,4,0,0 "IFM1" "translation initiation factor 2, mitochondrial" ytykr103w - 11,7,0,0 "null" "similarity to multidrug resistance proteins" 67,50,25,0 "null" "similarity to multidrug resistance proteins" ytydr135c - 11,7,0,0 "YCF1" "glutathione S-conjugate transporter, vacuolar" 40,25,0,0 "YCF1" "glutathione S-conjugate transporter, vacuolar" 67,50,25,0 "YCF1" "glutathione S-conjugate transporter, vacuolar" 8,13,0,0 "YCF1" "glutathione S-conjugate transporter, vacuolar" ytynl227c - 6,1,0,0 "null" "similarity to dnaJ-like proteins" ytygr275w - 29,99,0,0 "RTT102" "Regulator of Ty1 Transposition" ytydr310c 4,5,1,4 "SUM1" "suppressor of SIR mutations" 40,10,0,0 "SUM1" "suppressor of SIR mutations" ytylr410w - 6,7,4,0 "VIP1" "strong similarity to S. pombe protein ASP1P" ytynl068c - 4,99,0,0 "FKH2" "homology to D.melanogaster forkhead protein" 40,10,0,0 "FKH2" "homology to D.melanogaster forkhead protein" ytyer187w - 11,99,0,0 "null" "similarity to killer toxin KHS precursor" ytyhr073w - 1,6,1,0 "OSH3" "similarity to OSH1P, YDL019c and mammalian oxysterol-binding protei" ytynl242w - 14,4,3,5 "APG2" "required for sporulation" 3,3,2,0 "APG2" "required for sporulation" ytyjl145w - 1,6,13,0 "null" "weak similarity to T.pacificus retinal-binding protein" ytygr009c - 14,4,3,1 "SEC9" "protein transport protein" 40,2,0,0 "SEC9" "protein transport protein" 8,16,0,0 "SEC9" "protein transport protein" 8,7,0,0 "SEC9" "protein transport protein" ytylr237w - 1,7,10,0 "THI7" "thiamin transport protein" 67,99,0,0 "THI7" "thiamin transport protein" ytyor109w - 1,6,99,0 "INP53" "phosphatidylinositol phosphate phosphatase" 30,1,0,0 "INP53" "phosphatidylinositol phosphate phosphatase" ytydr137w - 14,1,0,0 "RGP1" "reduced growth phenotype protein" 3,3,1,0 "RGP1" "reduced growth phenotype protein" ytynl084c - 14,4,3,1 "END3" "required for endocytosis and cytoskeletal organization" 14,4,3,3 "END3" "required for endocytosis and cytoskeletal organization" 40,4,0,0 "END3" "required for endocytosis and cytoskeletal organization" 8,19,0,0 "END3" "required for endocytosis and cytoskeletal organization" ytylr318w - 3,1,3,0 "EST2" "catalytic subunit of the telomerase" 30,10,3,0 "EST2" "catalytic subunit of the telomerase" 40,10,0,0 "EST2" "catalytic subunit of the telomerase" ytykl025c 30,1,0,0 "PAN3" "component of the PAB1P-dependent poly(A) ribonuclease" 4,5,5,0 "PAN3" "component of the PAB1P-dependent poly(A) ribonuclease" ytyir033w - 3,1,9,5 "MGA2" "may be involved in the remodeling chromatin structure" 40,10,0,0 "MGA2" "may be involved in the remodeling chromatin structure" ytyml114c 4,5,1,1 "TAF65" "TBP Associated Factor 65 KDa" ytyhr076w - 2,99,0,0 "null" "weak similarity to C.elegans hypothetical protein CEW09D10" 40,16,0,0 "null" "weak similarity to C.elegans hypothetical protein CEW09D10" ytydr488c - 3,3,1,0 "PAC11" "required in the absence of CIN8P" 40,4,0,0 "PAC11" "required in the absence of CIN8P" 8,22,0,0 "PAC11" "required in the absence of CIN8P" ytypl254w 4,5,1,4 "HFI1" "transcriptional coactivator" 40,10,0,0 "HFI1" "transcriptional coactivator" ytykl106w - 1,1,1,0 "AAT1" "aspartate transaminase, mitochondrial" 40,16,0,0 "AAT1" "aspartate transaminase, mitochondrial" ytymr052w - 13,11,3,7 "FAR3" "involved in pheromone-mediated cell cycle arrest" 14,4,3,3 "FAR3" "involved in pheromone-mediated cell cycle arrest" 3,3,1,0 "FAR3" "involved in pheromone-mediated cell cycle arrest" ytyor301w - 40,1,0,0 "RAX1" "similarity to S. pombe SPAC23G3.05c" ytypl190c 4,5,5,0 "NAB3" "polyadenylated RNA-binding protein" 40,10,0,0 "NAB3" "polyadenylated RNA-binding protein" ytykl041w - 40,22,0,0 "VPS24" "endosomal Vps protein complex subunit" 6,4,0,0 "VPS24" "endosomal Vps protein complex subunit" 8,13,0,0 "VPS24" "endosomal Vps protein complex subunit" ytydr410c - 1,6,7,0 "STE14" "farnesyl cysteine carboxyl-methyltransferase" 40,7,0,0 "STE14" "farnesyl cysteine carboxyl-methyltransferase" 6,7,0,0 "STE14" "farnesyl cysteine carboxyl-methyltransferase" ytymr213w - 3,3,1,0 "CEF1" "required during G2/M transition" ytygr202c - 1,6,1,0 "PCT1" "cholinephosphate cytidylyltransferase" 40,7,0,0 "PCT1" "cholinephosphate cytidylyltransferase" ytyjl165c - 11,1,0,0 "HAL5" "ser/thr protein kinase" 30,1,0,0 "HAL5" "ser/thr protein kinase" ytyil114c - 40,16,0,0 "POR2" "voltage dependent anion channel (YVDAC2)" 67,1,1,0 "POR2" "voltage dependent anion channel (YVDAC2)" 8,4,0,0 "POR2" "voltage dependent anion channel (YVDAC2)" ytylr191w - 40,19,0,0 "PEX13" "peroxisomal protein involved in protein import - peroxin" 6,4,0,0 "PEX13" "peroxisomal protein involved in protein import - peroxin" 8,10,0,0 "PEX13" "peroxisomal protein involved in protein import - peroxin" ytydr331w - 1,6,7,0 "GPI8" "essential for GPI anchor attachment" 40,7,0,0 "GPI8" "essential for GPI anchor attachment" 6,7,0,0 "GPI8" "essential for GPI anchor attachment" ytylr272c - 40,10,3,0 "YCS4" "subunit of condensin protein complex" ytyil035c - 3,3,1,0 "CKA1" "casein kinase II, catalytic alpha chain" 4,3,99,0 "CKA1" "casein kinase II, catalytic alpha chain" 40,10,0,0 "CKA1" "casein kinase II, catalytic alpha chain" ytylr418c 4,5,1,4 "CDC73" "DNA-directed RNA polymerase II accessory protein" 40,10,0,0 "CDC73" "DNA-directed RNA polymerase II accessory protein" ytyjr089w - 14,10,2,1 "BIR1" "member of the inhibitor of apoptosis family, participate in chromosome segregation events" 3,3,4,5 "BIR1" "member of the inhibitor of apoptosis family, participate in chromosome segregation events" ytycr027c - 10,1,99,0 "RSG1" "rheb-like Gene involved in growth regulation" ytyjl168c - 4,99,0,0 "SET2" "enhancer of zeste-like" Propertest Accuracy: 57/193 (29.53%) Propertest Frequency class '4/5/0/0': 196/1292 (15.17%) New (unknown) data (851 items): ytyar033w - 99,0,0,0 "FUN59" "strong similarity to YGL051w, YGL053w, YAR031w, FUN55P, YAR028w and YCR007c" ytyer051w - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein" ytyor080w - 99,0,0,0 "DIA2" "weak similarity to TRCDSEMBL:RNRNAHOP_1 Rattus norvegicus mRNA for Hsp70/Hsp90 organizing protein" ytygr206w - 99,0,0,0 "null" "similarity to Xenopus transcription factor Oct-1.17" ytylr021w - 99,0,0,0 "null" "hypothetical protein" ytypr105c - 99,0,0,0 "COD1" "similarity to hypothetical protein SPCC338.13 S. pombe" ytylr022c - 99,0,0,0 "null" "similarity to C.elegans and M.jannaschii hypothetical proteins" ytykl047w - 99,0,0,0 "null" "hypothetical protein" ytydl173w - 99,0,0,0 "null" "hypothetical protein" ytypl197c - 99,0,0,0 "null" "questionable ORF" ytypr106w - 98,0,0,0 "ISR1" "protein kinase" ytyor083w - 99,0,0,0 "null" "weak similarity to YKR091w" ytygl060w - 99,0,0,0 "null" "strong similarity to hypothetical protein YBR216c" ytylr358c - 99,0,0,0 "null" "questionable ORF" ytylr024c - 99,0,0,0 "UBR2" "similarity to ubiquitin--protein ligase UBR1P" ytydl175c - 99,0,0,0 "null" "weak similarity to cellular nucleic acid binding proteins" ytydr352w - 99,0,0,0 "null" "weak similarity to hypothetical proteins YOL092w, YBR147w and YMR010w" ytymr156c - 99,0,0,0 "TPP1" "similarity to mammalian polynucleotide kinase 3'-phosphatase" ytypl025c - 99,0,0,0 "null" "questionable ORF" ytypl199c - 99,0,0,0 "null" "weak similarity to T.cruzi p284 protein" ytylr199c - 99,0,0,0 "null" "hypothetical protein" ytydl002c - 98,0,0,0 "NHP10" "Non-histone protein" ytyil151c - 99,0,0,0 "null" "similarity to mitochondrial aldehyde dehydrogenase Ald1p" ytydr193w - 99,0,0,0 "null" "questionable ORF" ytydl176w - 99,0,0,0 "null" "hypothetical protein" ytydr514c - 99,0,0,0 "null" "strong similarity to hypothetical protein YCL036w" ytydl177c - 99,0,0,0 "null" "similarity to hypothetical protein YCR059c" ytylr454w - 99,0,0,0 "null" "similarity to YPR117w" ytycr063w - 98,0,0,0 "BUD31" "strong similarity to Xenopus G10 and human edg-2 protein" ytygl224c - 99,0,0,0 "null" "strong similarity to hypothetical protein YER037w" ytylr455w - 99,0,0,0 "null" "weak similarity to human G/T mismatch binding protein" ytygl064c - 99,0,0,0 "null" "similarity to YLR276c and YKR024c" ytyil058w - 99,0,0,0 "null" "hypothetical protein" ytykl082c - 99,0,0,0 "null" "weak similarity to C.elegans hypothetical protein" ytylr456w - 99,0,0,0 "null" "strong similarity to YPR172w" ytydr290w - 99,0,0,0 "null" "questionable ORF" ytyal053w - 99,0,0,0 "null" "strong similarity to hypothetical proteins YOR365c,YGL139w,YPL221w" ytyer059w - 98,0,0,0 "PCL6" "cyclin like protein interacting with PHO85P" ytynl035c - 99,0,0,0 "null" "similarity to hypothetical protein S. pombe" ytydr291w - 98,0,0,0 "null" "similarity to B.subtilis helicases" ytydr198c - 99,0,0,0 "null" "similarity to hypothetical protein S. pombe" ytykl084w - 99,0,0,0 "null" "strong similarity to S.pombe hypothetical protein SPAC29B12" ytydr024w - 99,0,0,0 "FYV1" "hypothetical protein" ytyil090w - 99,0,0,0 "null" "similarity to hypothetical S. pombe protein" ytynr054c - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein CEESL47F" ytyil091c - 99,0,0,0 "null" "weak similarity to SPT5P" ytyal056w - 99,0,0,0 "GPE2" "similarity to hypothetical protein YOR371c" ytydr199w - 99,0,0,0 "null" "questionable ORF" ytygl228w - 99,0,0,0 "SHE10" "similarity to hypothetical protein YFR039c" ytypr143w - 99,0,0,0 "null" "hypothetical protein" ytyor012w - 99,0,0,0 "null" "similarity to YDR391c" ytynl038w - 99,0,0,0 "GPI15" "sequence and functional homologue of human Pig-H protein" ytymr192w - 99,0,0,0 "null" "similarity to mouse Tbc1 protein" ytygl164c - 99,0,0,0 "null" "similarity to S.pombe hypothetical protein SPAC31A2.10" ytyil092w - 99,0,0,0 "null" "hypothetical protein" ytyor013w - 99,0,0,0 "null" "strong similarity to YDR391c" ytymr259c - 99,0,0,0 "null" "similarity to hypothetical protein S. pombe" ytygr247w - 99,0,0,0 "null" "hypothetical protein" ytygl165c - 99,0,0,0 "null" "questionable ORF" ytyjr134c - 98,0,0,0 "SGM1" "similarity to paramyosin, myosin" ytyor282w - 99,0,0,0 "null" "questionable ORF" ytypl064c - 99,0,0,0 "null" "weak similarity to S.pombe peptidyl-prolyl cis-trans isomerase" ytynl230c - 99,0,0,0 "ELA1" "weak similarity to mammalian transcription elongation factor elongin A" ytygr089w - 99,0,0,0 "null" "weak similarity to rat tropomyosin" ytyjl118w - 99,0,0,0 "null" "hypothetical protein" ytylr224w - 99,0,0,0 "null" "hypothetical protein" ytyjr136c - 99,0,0,0 "null" "weak similarity to human 3',5'-cyclic-GMP phosphodiesterase" ytylr064w - 99,0,0,0 "null" "weak similarity to Anopheles NADH-ubiquinone oxidoreductase, chain 4" ytyjl119c - 99,0,0,0 "null" "questionable ORF" ytylr225c - 99,0,0,0 "null" "strong similarity to YDR222w" ytynl136w - 99,0,0,0 "null" "similarity to neurofilament triplet M protein" ytyjl213w - 99,0,0,0 "null" "similarity to Methanobacterium aryldialkylphosphatase related protein" ytylr065c - 99,0,0,0 "null" "weak similarity to hypothetical protein A. thaliana" ytydr459c - 99,0,0,0 "null" "weak similarity to YNL326c" ytydr220c - 99,0,0,0 "null" "questionable ORF" ytylr320w - 99,0,0,0 "null" "hypothetical protein" ytyjl215c - 99,0,0,0 "null" "hypothetical protein" ytyor112w - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein" ytyll049w - 99,0,0,0 "null" "hypothetical protein" ytydr221w - 99,0,0,0 "null" "weak similarity to the beta subunit of an ER luminal alpha-glucosidase from mouse" ytyfr056c - 99,0,0,0 "null" "questionable ORF" ytypl068c - 99,0,0,0 "null" "hypothetical protein" ytymr025w - 99,0,0,0 "null" "hypothetical protein" ytybl051c - 99,0,0,0 "PIN4" "similarity to S.pombe Z66568_C protein" ytydr396w - 99,0,0,0 "null" "hypothetical protein" ytydr128w - 99,0,0,0 "null" "weak similarity to SEC27P, YMR131c and human retinoblastoma-binding protein" ytynl235c - 99,0,0,0 "null" "questionable ORF" ytymr122c - 99,0,0,0 "null" "hypothetical protein" ytyhr081w - 99,0,0,0 "null" "weak similarity to human C1D protein" ytykl111c - 99,0,0,0 "null" "questionable ORF" ytygr016w - 99,0,0,0 "null" "weak similarity to M.jannaschii hypothetical protein MJ1317" ytybl053w - 99,0,0,0 "null" "questionable ORF" ytydr066c - 99,0,0,0 "null" "similarity to hypothetical protein YER139c" ytypl261c - 99,0,0,0 "null" "questionable ORF" ytyml107c - 99,0,0,0 "null" "hypothetical protein" ytylr261c - 99,0,0,0 "null" "questionable ORF" ytyor118w - 99,0,0,0 "null" "similarity to PIR:T39884 hypothetical protein SPBC21.02 S. pombe" ytyor119c - 99,0,0,0 "RIO1" "similarity to a C.elegans ZK632.3 protein" ytymr124w - 99,0,0,0 "null" "weak similarity to YLR031w" ytydr067c - 99,0,0,0 "null" "similarity to YNL099c" ytymr299c - 99,0,0,0 "null" "weak similarity to hypothetical protein YJL062w" ytylr422w - 99,0,0,0 "null" "similarity to human DOCK180 protein" ytyml108w - 99,0,0,0 "null" "hypothetical protein" ytymr126c - 99,0,0,0 "null" "hypothetical protein" ytyhr085w - 99,0,0,0 "null" "weak similarity to fruit fly brahma transcriptional activator" ytybl057c - 99,0,0,0 "null" "strong similarity to hypothetical S.pombe protein" ytydr068w - 99,0,0,0 "DOS2" "weak similarity to mouse transcription factor UBF" ytykl115c - 99,0,0,0 "null" "questionable ORF" ytykl116c - 98,0,0,0 "PRR1" "similarity to rat SNF1, Celegans unc-51, DUN1P and other protein serine kinases" ytybr075w - 99,0,0,0 "null" "weak similarity to hypothetical protein S. pombe" ytyor311c - 99,0,0,0 "HSD1" "similarity to hypothetical S. pombe protein" ytypr014c - 99,0,0,0 "null" "hypothetical protein" ytygr051c - 99,0,0,0 "null" "questionable ORF" ytylr425w - 99,0,0,0 "TUS1" "similarity to GDP-GTP exchange factors" ytyjr003c - 99,0,0,0 "null" "hypothetical protein" ytygr211w - 99,0,0,0 "ZPR1" "similarity to M.musculus zinc finger protein ZPR1" ytyhr088w - 99,0,0,0 "RPF1" "similarity to hypothetical protein YNL075w" ytyor218c - 99,0,0,0 "null" "questionable ORF" ytykl052c - 99,0,0,0 "ASK1" "similarity to hypothetical protein S.pombe" ytylr426w - 99,0,0,0 "null" "weak similarity to 3-oxoacyl-[acyl-carrier-protein] reductase from E. coli" ytylr361c - 99,0,0,0 "null" "similarity to YOR3329c" ytyol070c - 99,0,0,0 "null" "hypothetical protein" ytynr021w - 99,0,0,0 "null" "weak similarity to hypothetical protein S. pombe" ytynr022c - 99,0,0,0 "null" "weak similarity to protein phosphatases" ytylr427w - 99,0,0,0 "null" "weak similarity to human transcription regulator Staf-5" ytynl179c - 99,0,0,0 "null" "hypothetical protein" ytykl214c - 99,0,0,0 "null" "weak similarity to mouse transcriptional coactivator ALY" ytyor154w - 99,0,0,0 "null" "similarity to hypothetical A. thaliana proteins F19G10.15 and T19F06.21" ytyol137w - 99,0,0,0 "null" "weak similarity to tetracycline resistance proteins" ytybr174c - 99,0,0,0 "null" "questionable ORF" ytylr269c - 99,0,0,0 "null" "questionable ORF" ytyol072w - 99,0,0,0 "THP1" "weak similarity to hypothetical protein C. elegans" ytyil127c - 99,0,0,0 "null" "weak similarity to SMY2P" ytygr150c - 99,0,0,0 "null" "similarity to PIR:T39838 hypothetical protein SPBC19G7.07c S. pombe" ytyjr102c - 99,0,0,0 "VPS25" "weak similarity to hypothetical protein D. melanogaster" ytyel044w - 99,0,0,0 "IES6" "similarity to SPAC222.04c hypothetical protein S. pombe" ytyal027w - 99,0,0,0 "null" "hypothetical protein" ytymr163c - 99,0,0,0 "null" "hypothetical protein" ytyor091w - 99,0,0,0 "null" "similarity to hypothetical S.pombe protein D83992_G" ytypr050c - 99,0,0,0 "null" "questionable ORF" ytygr058w - 99,0,0,0 "null" "similarity to mouse calcium-binding protein" ytyfr021w - 99,0,0,0 "AUT10" "similarity to hypothetical protein YPL100w" ytykl059c - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein" ytygl136c - 99,0,0,0 "null" "weak similarity to E.coli ftsJ protein" ytydr521w - 99,0,0,0 "null" "questionable ORF" ytybl096c - 99,0,0,0 "null" "questionable ORF" ytynl105w - 99,0,0,0 "null" "questionable ORF" ytydr428c - 99,0,0,0 "null" "weak similarity to predicted esterase of proteobacterium" ytylr368w - 99,0,0,0 "null" "weak similarity to Mus musculus F-box protein FBA" ytynr029c - 99,0,0,0 "null" "similarity to P.denitrificans cobW protein" ytydl012c - 99,0,0,0 "null" "strong similarity to hypothetical protein YBR016w and YDR210w" ytynl041c - 99,0,0,0 "TFI2" "weak similarity to MLP1" ytyol078w - 99,0,0,0 "null" "similarity to stress activated MAP kinase interacting protein S. pombe" ytygl232w - 99,0,0,0 "null" "weak similarity to P.falciparum dihydropteroate synthase" ytybr007c - 99,0,0,0 "null" "hypothetical protein" ytydr524c - 99,0,0,0 "AGE1" "similarity to ADP-ribosylation factor (ARF) GTPase activating protein (GAP) with effector functions" ytykr078w - 99,0,0,0 "null" "similarity to VPS5P" ytyfl007w - 99,0,0,0 "BLM3" "weak similarity to Mms19p" ytygr156w - 99,0,0,0 "PTI1" "weak similarity to PIR:A40220 cleavage stimulation factor 64K chain - human" ytygl139w - 99,0,0,0 "null" "strong similarity to hypothetical protein YPL221w" ytyil163c - 99,0,0,0 "null" "questionable ORF" ytyhr114w - 99,0,0,0 "BZZ1" "similarity to S.pombe hypothetical protein and human protein-tyrosine kinase fer" ytyjl120w - 99,0,0,0 "null" "questionable ORF" ytydr526c - 99,0,0,0 "null" "questionable ORF" ytynl109w - 99,0,0,0 "null" "weak similarity to cytochrome-c oxidase" ytyhr115c - 99,0,0,0 "null" "strong similarity to hypothetical protein YNL116w" ytydl016c - 99,0,0,0 "null" "questionable ORF" ytydr527w - 99,0,0,0 "null" "weak similarity to Plasmodium yoelii rhoptry protein" ytyil165c - 99,0,0,0 "null" "similarity to nitrilases" ytygr093w - 99,0,0,0 "null" "similarity to hypothetical S.pombe protein" ytynl140c - 99,0,0,0 "null" "questionable ORF" ytyjl123c - 99,0,0,0 "null" "weak similarity to D.melanogaster troponin T and human nucleolin" ytynl047c - 99,0,0,0 "null" "similarity to probable transcription factor ASK10P and hypothetical protein YPR115w, and strong similarity to hypothetical protein YIL105c" ytyhr052w - 99,0,0,0 "CIC1" "adaptor protein specifically linking the 26S proteasome to its substrate, the SCF component CDC4" ytyjr141w - 99,0,0,0 "null" "weak similarity to hypothetical protein SPBC1734.10c S. pombe" ytypl070w - 99,0,0,0 "null" "weak similarity to VPS9P" ytyir010w - 99,0,0,0 "null" "hypothetical protein" ytygl239c - 99,0,0,0 "null" "questionable ORF" ytynr065c - 99,0,0,0 "null" "strong similarity to YJL222w, YIL173w and PEP1P" ytyml011c - 99,0,0,0 "null" "hypothetical protein" ytyer167w - 99,0,0,0 "BCK2" "suppressor of mutations in protein kinase C pathway components" ytygl079w - 99,0,0,0 "null" "hypothetical protein" ytynl143c - 99,0,0,0 "null" "hypothetical protein" ytynr066c - 99,0,0,0 "null" "strong similarity to PEP1P" ytynl049c - 99,0,0,0 "SFB2" "strong similarity to YIL109c" ytypl138c - 99,0,0,0 "SPP1" "weak similarity to fruit fly polycomblike nuclear protein" ytymr269w - 99,0,0,0 "null" "weak similarity to C.elegans hypothetical protein CELT23B3" ytyir013c - 99,0,0,0 "GAT4" "strong similarity to GAT3, similarity to GAT2" ytykr007w - 99,0,0,0 "null" "weak similarity to Streptococcus protein M5 precursor" ytydr467c - 99,0,0,0 "null" "questionable ORF" ytycr001w - 99,0,0,0 "null" "weak similarity to chloride channel proteins" ytypl233w - 99,0,0,0 "null" "weak similarity to hypothetical protein S. pombe" ytyml013w - 99,0,0,0 "null" "hypothetical protein" ytypr090w - 99,0,0,0 "null" "weak similarity to hypothetical protein SPAC25B8.08 S. pombe" ytynr068c - 99,0,0,0 "null" "similarity to BUL1P" ytyor199w - 99,0,0,0 "null" "questionable ORF" ytyhr151c - 99,0,0,0 "null" "hypothetical protein" ytyfl046w - 99,0,0,0 "null" "weak similarity to middle part of C.elegans myosin heavy chain A" ytypr092w - 99,0,0,0 "null" "questionable ORF" ytybr141c - 99,0,0,0 "null" "similarity to hypothetical protein S. pombe" ytydr469w - 99,0,0,0 "SDC1" "weak similarity to D. melanogaster hypothetical protein" ytylr076c - 99,0,0,0 "null" "questionable ORF" ytydl213c - 99,0,0,0 "FYV14" "weak similarity to potato small nuclear ribonucleoprotein U2B and human splicing factor homolog" ytyjl064w - 99,0,0,0 "null" "hypothetical protein" ytydr136c - 99,0,0,0 "null" "questionable ORF" ytyor296w - 99,0,0,0 "null" "similarity to hypothetical S. pombe protein" ytydr071c - 99,0,0,0 "null" "similarity to O.aries arylalkylamine N-acetyltransferase" ytypr094w - 99,0,0,0 "null" "weak similarity to chicken lim-3 protein" ytyjr083c - 99,0,0,0 "null" "hypothetical protein" ytylr077w - 99,0,0,0 "null" "weak similarity to Xenopus RCC1 protein" ytyol106w - 99,0,0,0 "null" "questionable ORF - identified by SAGE" ytybl060w - 99,0,0,0 "null" "weak similarity to probable guanine nucleotide exchange factor, S.pombe" ytylr238w - 99,0,0,0 "null" "similarity to YDR200c" ytymr130w - 99,0,0,0 "null" "similarity to D.melanogaster Dreg-2 protein" ytyjr084w - 99,0,0,0 "null" "weak similarity to S.pombe hypothetical protein SPAC1B3.08" ytydl216c - 99,0,0,0 "RRI1" "similarity to Jun activation domain binding protein homologue of A. thaliana" ytynl245c - 99,0,0,0 "null" "similarity to hypothetical protein CG2843 D. melanogaster" ytyjl162c - 99,0,0,0 "null" "weak similarity to dnaJ proteins" ytyel014c - 99,0,0,0 "null" "hypothetical protein" ytygr025w - 99,0,0,0 "null" "questionable ORF" ytybl062w - 99,0,0,0 "null" "questionable ORF" ytypr097w - 99,0,0,0 "null" "similarity to hypothetical protein SPCC1450.12 S. pombe" ytymr132c - 99,0,0,0 "null" "similarity to hypothetical S. pombe protein" ytygr294w - 99,0,0,0 "null" "strong similarity to members of the SRP1P/TIP1P family" ytyel015w - 99,0,0,0 "null" "weak similarity to SPA2P" ytykr045c - 99,0,0,0 "null" "hypothetical protein" ytyjr088c - 99,0,0,0 "null" "weak similarity to S.pombe hypothetical protein SPBC14C8.18c" ytyhr093w - 99,0,0,0 "AHT1" "hypothetical protein" ytyol045w - 99,0,0,0 "null" "similarity to ser/thr protein kinase" ytygr122w - 99,0,0,0 "null" "hypothetical protein" ytylr003c - 99,0,0,0 "null" "weak similarity to PIR:T39953 hypothetical protein SPBC23G7.07c S. pombe" ytyol046c - 99,0,0,0 "null" "questionable ORF" ytyor129c - 99,0,0,0 "null" "weak similarity to hypothetical protein SPBC776.06c S. pombe" ytybr242w - 99,0,0,0 "null" "strong similarity to hypothetical protein YGL101w" ytynl249c - 99,0,0,0 "MPA43" "similarity to YDR109c" ytynl089c - 99,0,0,0 "null" "questionable ORF" ytyor223w - 99,0,0,0 "null" "hypothetical protein" ytyer034w - 99,0,0,0 "null" "hypothetical protein" ytygl107c - 99,0,0,0 "null" "strong similarity to hypothetical protein YBR238c" ytydr332w - 99,0,0,0 "null" "similarity to E.coli hypothetical protein and weak similarity to RNA helicase MSS116 / YDR194c" ytykr047w - 99,0,0,0 "null" "questionable ORF" ytydr333c - 99,0,0,0 "null" "similarity to hypothetical S. pombe protein" ytycr041w - 99,0,0,0 "null" "questionable ORF" ytygl042c - 99,0,0,0 "null" "questionable ORF" ytypl005w - 99,0,0,0 "null" "weak similarity to NUP2P" ytylr434c - 99,0,0,0 "null" "questionable ORF" ytyor320c - 99,0,0,0 "null" "similarity to GNT1 alphaN-acetylglucosamine transferase K. lactis" ytyhr191c - 99,0,0,0 "CTF8" "weak similarity to hypothetical protein B24H17.20 Neurospora crassa" ytyjr012c - 99,0,0,0 "null" "weak similarity to hypothetical protein B17C10.80 N. crassa" ytylr101c - 99,0,0,0 "null" "questionable ORF" ytygl109w - 99,0,0,0 "null" "questionable ORF" ytyjl169w - 99,0,0,0 "null" "questionable ORF" ytybr246w - 99,0,0,0 "null" "similarity to TREMBL:SPCC18_15 hypothetical protein, S. pombe" ytyhr192w - 99,0,0,0 "null" "hypothetical protein" ytypl102c - 99,0,0,0 "KRE24" "questionable ORF" ytylr007w - 99,0,0,0 "null" "hypothetical protein" ytyor322c - 99,0,0,0 "null" "similarity to hypothetical S.pombe protein SPAC1F12.05" ytynl187w - 99,0,0,0 "null" "hypothetical protein" ytyjr013w - 99,0,0,0 "null" "similarity to C.elegans B0491.1 protein" ytymr233w - 99,0,0,0 "null" "strong similarity to YOR295w" ytydr336w - 99,0,0,0 "null" "weak similarity to B.subtilis hypothetical protein X" ytylr437c - 99,0,0,0 "null" "hypothetical protein" ytypl009c - 99,0,0,0 "null" "similarity to M.jannaschii hypothetical protein" ytydr271c - 99,0,0,0 "null" "questionable ORF" ytyjr014w - 99,0,0,0 "null" "strong similarity to S.pombe hypothetical protein SPBC16C6.05" ytycl028w - 98,0,0,0 "RNQ1" "prion, epigenetic modifier of protein function" ytydr431w - 99,0,0,0 "null" "questionable ORF" ytyor164c - 99,0,0,0 "null" "similarity to conserved hypothetical protein S. pombe" ytypr121w - 99,0,0,0 "THI22" "similarity to B.subtilis transcriptional activator tenA" ytymr075w - 99,0,0,0 "null" "weak similarity to human Mi-2 protein" ytylr104w - 99,0,0,0 "null" "hypothetical protein" ytylr373c - 99,0,0,0 "VID22" "similarity to hypothetical protein Ygr071cp" ytyjr110w - 98,0,0,0 "null" "similarity to human myotubularin" ytygr064w - 99,0,0,0 "null" "questionable ORF" ytyhr022c - 99,0,0,0 "null" "weak similarity to ras-related protein" ytyor325w - 99,0,0,0 "null" "questionable ORF" ytymr077c - 98,0,0,0 "VPS20" "similarity to SNF7 protein" ytynl285w - 99,0,0,0 "null" "hypothetical protein" ytykr083c - 99,0,0,0 "DAD2" "weak similarity to S.japonicum paramyosin" ytyal037w - 99,0,0,0 "null" "strong similarity to GTP-binding proteins" ytyjr018w - 99,0,0,0 "null" "questionable ORF" ytypl202c - 99,0,0,0 "AFT2" "similarity to cell size regulation protein RCS1P" ytybr281c - 99,0,0,0 "null" "similarity to hypothetical protein YFR044c" ytyfl013c - 99,0,0,0 "IES1" "weak similarity to Dictyostelium protein kinase" ytyer139c - 99,0,0,0 "null" "similarity to hypothetical protein YDR066c" ytypl108w - 99,0,0,0 "null" "hypothetical protein" ytygr068c - 99,0,0,0 "null" "weak similarity to ROD1P" ytyor262w - 99,0,0,0 "null" "similarity to YLR243w" ytydl099w - 99,0,0,0 "null" "weak similarity to myosin heavy chain proteins" ytydr437w - 99,0,0,0 "null" "weak similarity to DSCR5b H. sapiens" ytydr532c - 99,0,0,0 "KRE28" "weak similarity Plasmodium repeat organellar protein" ytygr163w - 99,0,0,0 "GTR2" "similarity to human ragA protein and GTR1P" ytycl063w - 99,0,0,0 "null" "weak similarity to yeast translation regulator GCD6P" ytynl050c - 99,0,0,0 "null" "hypothetical protein" ytykr087c - 99,0,0,0 "null" "similarity to hypothetical Myxococcus xanthus protein" ytynl211c - 99,0,0,0 "null" "hypothetical protein" ytyhr122w - 99,0,0,0 "null" "similarity to hypothetical C. elegans protein F45G2.a" ytydr200c - 99,0,0,0 "null" "similarity to hypothetical protein YLR238w" ytyer077c - 99,0,0,0 "null" "hypothetical protein" ytymr003w - 99,0,0,0 "null" "hypothetical protein" ytyjr118c - 99,0,0,0 "ILM1" "weak similarity to Helicobacter pylori UreD protein" ytygl083w - 99,0,0,0 "SCY1" "weak similarity to bovine rhodopsin kinase and to YGR052w" ytydr470c - 99,0,0,0 "UGO1" "similarity to chromosome segregation protein CSE1P" ytybr113w - 99,0,0,0 "null" "questionable ORF" ytygr168c - 99,0,0,0 "null" "hypothetical protein" ytycl068c - 98,0,0,0 "null" "strong similarity to BUD5P; putative pseudogene" ytyjr054w - 99,0,0,0 "null" "similarity to hypothetical protein YML047c" ytygl246c - 99,0,0,0 "RAI1" "weak similarity to C.elegans dom-3 protein" ytybl031w - 99,0,0,0 "SHE1" "hypothetical protein" ytylr143w - 99,0,0,0 "null" "weak similarity to Pyrococcus horikoshii hypothetical protein PHBJ017" ytydr203w - 99,0,0,0 "null" "questionable ORF" ytyil001w - 99,0,0,0 "null" "similarity to S.pombe hypothetical protein, weak similarity to human ankyrin" ytyor364w - 99,0,0,0 "null" "hypothetical protein" ytymr102c - 99,0,0,0 "null" "strong similarity to YKL121w" ytyjr056c - 99,0,0,0 "null" "hypothetical protein" ytygl247w - 99,0,0,0 "null" "similarity to hypothetical protein YHR036w" ytylr145w - 99,0,0,0 "null" "hypothetical protein" ytypl080c - 99,0,0,0 "null" "hypothetical protein" ytyir020c - 99,0,0,0 "null" "hypothetical protein" ytypl146c - 99,0,0,0 "null" "weak similarity to myosin heavy chain proteins" ytyil003w - 99,0,0,0 "DRE3" "strong similarity to NBP35P and human nucleotide-binding protein" ytynl152w - 99,0,0,0 "null" "similarity to hypothetical protein S. pombe" ytyjl135w - 99,0,0,0 "null" "questionable ORF" ytylr402w - 99,0,0,0 "null" "hypothetical protein" ytydr048c - 99,0,0,0 "null" "questionable ORF" ytyjl072c - 99,0,0,0 "null" "similarity to PIR:T40665 hypothetical protein SPBC725.13c S. pombe" ytylr243w - 99,0,0,0 "null" "strong similarity to YOR262w" ytydl060w - 99,0,0,0 "TSR1" "similarity to C.elegans hypothetical protein" ytydr049w - 99,0,0,0 "null" "similarity to C.elegans K06H7.3 protein" ytylr404w - 99,0,0,0 "null" "hypothetical protein" ytyol019w - 99,0,0,0 "TOS7" "similarity to RIM9P and YFR012w" ytyir025w - 99,0,0,0 "MND2" "hypothetical protein" ytynl091w - 99,0,0,0 "null" "similarity to chicken h-caldesmon, USO1P and YKL201c" ytygr031w - 99,0,0,0 "null" "similarity to hypothetical protein YGR015c and weak similarity H.influenzae dihydrolipoamide acetyltransferase" ytypr169w - 99,0,0,0 "null" "weak similarity to hypothetical protein SPAC1A6.02 S. pombe" ytycr015c - 99,0,0,0 "null" "hypothetical protein" ytylr181c - 99,0,0,0 "null" "hypothetical protein" ytyol050c - 99,0,0,0 "null" "questionable ORF" ytynl158w - 99,0,0,0 "null" "hypothetical protein" ytygl110c - 99,0,0,0 "null" "similarity to hypothetical protein SPCC1906.02c S. pombe" ytypl181w - 99,0,0,0 "null" "weak similarity to YKR029c" ytymr044w - 99,0,0,0 "IOC4" "weak similarity to S. pombe SPBC29A3.13 and CRN1 Coronin-like protein" ytylr407w - 99,0,0,0 "null" "hypothetical protein" ytyml122c - 99,0,0,0 "null" "hypothetical protein" ytynl253w - 99,0,0,0 "null" "similarity to hypothetical protein C. elegans" ytynl254c - 99,0,0,0 "null" "hypothetical protein" ytyjl077c - 99,0,0,0 "ICS3" "hypothetical protein" ytyar023c - 99,0,0,0 "null" "strong similarity to FUN55P, FUN59P, YGL051w, YCR007c, YGL053w, YAR031w and YAR028w" ytynl095c - 99,0,0,0 "null" "strong similarity to YOR092w" ytygr035c - 99,0,0,0 "null" "hypothetical protein" ytypl184c - 99,0,0,0 "null" "weak similarity to PUB1P" ytydr084c - 98,0,0,0 "null" "similarity to hypothetical C.elegans protein" ytybr155w - 99,0,0,0 "CNS1" "weak similarity to stress-induced STI1P" ytyhr167w - 99,0,0,0 "THP2" "subunit of the THO complex, which appears to functionally connect transcription elongation with mitotic recombination" ytygl113w - 99,0,0,0 "SLD3" "weak similarity to YOR165w" ytydl162c - 99,0,0,0 "null" "hypothetical protein" ytydl228c - 99,0,0,0 "null" "similarity to A.klebsiana glutamate dehydrogenase" ytykl131w - 99,0,0,0 "null" "questionable ORF" ytyol054w - 99,0,0,0 "null" "weak similarity to transcription factors" ytymr209c - 99,0,0,0 "null" "similarity to conserved hypothetical protein S. pombe" ytykl037w - 99,0,0,0 "null" "weak similarity to C.elegans ubc-2 protein" ytydr340w - 99,0,0,0 "null" "questionable ORF" ytyjr098c - 99,0,0,0 "null" "weak similarity to Bacillus licheniformis esterase" ytyil044c - 99,0,0,0 "AGE2" "weak similarity to zinc finger protein GCS1P" ytyjl175w - 99,0,0,0 "null" "questionable ORF" ytyor139c - 99,0,0,0 "null" "questionable ORF" ytyml127w - 99,0,0,0 "RSC9" "weak similarity to LOS1P" ytydr501w - 98,0,0,0 "PLM2" "PLasmid Maintenance mutant shows 2mu-m plasmid instability" ytyor233w - 98,0,0,0 "KIN4" "ser/thr protein kinase" ytygl050w - 99,0,0,0 "null" "similarity to hypothetical protein SPAC25B8.15c S. pombe" ytynl193w - 99,0,0,0 "null" "weak similarity to hypothetical protein S. pombe" ytypl188w - 99,0,0,0 "POS5" "similarity to UTR1P and YEL041w" ytygl211w - 99,0,0,0 "null" "similarity to M.jannaschii hypothetical proteins MJ1157 and MJ1478" ytygr134w - 99,0,0,0 "CAF130" "hypothetical protein" ytyer140w - 99,0,0,0 "null" "similarity to PIR:T39406 hypothetical protein S. pombe" ytyjl178c - 99,0,0,0 "null" "hypothetical protein" ytylr015w - 99,0,0,0 "BRE2" "weak similarity to S.pombe hypothetical protein SPBC13G1" ytyor235w - 99,0,0,0 "null" "questionable ORF" ytyer046w - 99,0,0,0 "SPO73" "hypothetical protein" ytylr444c - 99,0,0,0 "null" "questionable ORF" ytybr095c - 99,0,0,0 "null" "weak similarity to hypothetical protein S. pombe" ytyar029w - 99,0,0,0 "FUN57" "strong similarity to YAR031w, YGL053w, FUN55P, FUN59P and YGL051w" ytygl052w - 99,0,0,0 "null" "questionable ORF" ytylr016c - 99,0,0,0 "null" "weak similarity to TRCDSEMBLNEW:AK022615_1 unnamed ORF; Homo sapiens" ytyor170w - 99,0,0,0 "null" "questionable ORF" ytykl136w - 99,0,0,0 "null" "questionable ORF" ytygr071c - 99,0,0,0 "null" "similarity to hypothetical protein YLR373c" ytycr054c - 99,0,0,0 "CTR86" "weak similarity to THR4P" ytypl112c - 99,0,0,0 "null" "weak similarity to YOR193w" ytyml066c - 99,0,0,0 "SMA2" "hypothetical protein" ytyar060c - 99,0,0,0 "null" "identical to hypothetical protein YHR212c" ytyjr024c - 99,0,0,0 "null" "weak similarity to C.elegans Z49131_E ZC373.5 protein" ytypr130c - 99,0,0,0 "null" "questionable ORF" ytyor238w - 99,0,0,0 "null" "similarity to hypothetical S. pombe protein" ytyor078w - 99,0,0,0 "BUD21" "weak similarity to YMR172w" ytyor333c - 99,0,0,0 "null" "questionable ORF" ytylr287c - 99,0,0,0 "null" "weak similarity to S.pombe hypothetical protein SPAC22E12" ytyhl013c - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein F21D5.2" ytygr073c - 99,0,0,0 "null" "questionable ORF" ytyar061w - 98,0,0,0 "null" "strong similarity to N-terminus of FLO1P - putative pseudogene" ytyhl014c - 99,0,0,0 "YLF2" "similarity to E.coli GTP-binding protein" ytynl294c - 99,0,0,0 "null" "similarity to TRCDSEMBL:AF152926_1 palH Emericella nidulans" ytyml068w - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein" ytygl057c - 99,0,0,0 "null" "hypothetical protein" ytyfr008w - 99,0,0,0 "null" "weak similarity to human centromere protein E" ytybr259w - 99,0,0,0 "null" "weak similarity to 'BH1924', sugar transport system; Bacillus halodurans" ytyll032c - 99,0,0,0 "null" "similarity to hypothetical protein SPAC9B6.13 S. pombe" ytydr014w - 99,0,0,0 "null" "weak similarity to chicken neurofilament triplet M protein" ytyor175c - 99,0,0,0 "null" "similarity to human and murine C3f protein" ytyal046c - 99,0,0,0 "null" "weak similarity to hypothetical protein S. pombe" ytygl152c - 99,0,0,0 "null" "questionable ORF" ytykl075c - 99,0,0,0 "null" "hypothetical protein" ytyjl009w - 99,0,0,0 "null" "questionable ORF" ytyer147c - 99,0,0,0 "SCC4" "protein required for sister chromatid cohesion" ytykl076c - 99,0,0,0 "null" "questionable ORF" ytypl116w - 98,0,0,0 "HOS3" "similarity to HOS1P, HOS2P, HOS3P, RPD3P and human histone deacetylase HD1" ytyll033w - 99,0,0,0 "null" "hypothetical protein" ytylr051c - 99,0,0,0 "null" "similarity to human acidic 82 kDa protein" ytydr445c - 99,0,0,0 "null" "questionable ORF" ytynl297c - 99,0,0,0 "MON2" "similarity to S.pombe hypothetical protein SPAC23D3.13c" ytyil083c - 99,0,0,0 "null" "similarity to conserved hypothetical protein SPCC4B3.18 S. pombe" ytydr540c - 99,0,0,0 "null" "similarity to E. coli unknown gene" ytynl123w - 99,0,0,0 "null" "weak similarity to C.jejuni serine protease" ytyfl023w - 99,0,0,0 "FYV11" "similarity to repeat structures in a Plasmodium falciparum protein (MESA) that binds human erythrocyte protein 4.1." ytylr052w - 99,0,0,0 "IES3" "hypothetical protein" ytybr292c - 99,0,0,0 "null" "hypothetical protein" ytyhr130c - 99,0,0,0 "null" "weak similarity to T.brucei H+-transporting ATP synthase" ytycr090c - 99,0,0,0 "null" "similarity to S. pombe SPBC2D10.03c" ytyhr036w - 99,0,0,0 "null" "similarity to hypothetical protein YGL247w" ytynr048w - 99,0,0,0 "null" "strong similarity to YCR094w and YNL323w" ytyor006c - 99,0,0,0 "null" "similarity to M.jannaschii hypothetical protein MJ0708" ytyll037w - 99,0,0,0 "null" "weak similarity to human platelet-activating factor receptor" ytyil086c - 99,0,0,0 "null" "hypothetical protein" ytyar068w - 99,0,0,0 "null" "strong similarity to hypothetical protein YHR214w-a" ytydr383c - 99,0,0,0 "null" "weak similarity to S.pombe paramyosin" ytyjl204c - 99,0,0,0 "null" "weak similarity to TOR2P" ytymr187c - 99,0,0,0 "null" "hypothetical protein" ytyfl027c - 99,0,0,0 "GYP8" "weak similarity to P.falciparum Pfmdr2 protein" ytydl032w - 99,0,0,0 "null" "questionable ORF" ytypr139c - 99,0,0,0 "null" "weak similarity to nGAP H. sapiens nGAP mRNA" ytybr027c - 99,0,0,0 "null" "hypothetical protein" ytynl127w - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein" ytypl216w - 99,0,0,0 "null" "similarity to YGL133w" ytygr002c - 99,0,0,0 "null" "similarity to hypothetical S. pombe protein" ytypl151c - 99,0,0,0 "PRP46" "strong similarity to A.thaliana PRL1 and PRL2 proteins" ytydr210w - 99,0,0,0 "null" "strong similarity to hypothetical protein YBR016w" ytybr028c - 98,0,0,0 "null" "similarity to ribosomal protein kinases" ytygl159w - 99,0,0,0 "null" "hypothetical protein" ytydr051c - 99,0,0,0 "null" "similarity to hypothetical A. thaliana protein BAC F7G19" ytyjr129c - 99,0,0,0 "null" "weak similarity to hypothetical protein YNL024c" ytynl129w - 99,0,0,0 "null" "weak similarity to M.pneumoniae uridine kinase udk" ytygr272c - 99,0,0,0 "null" "similarity to hypothetical S.pombe protein SPAC12G12.02" ytyjl207c - 99,0,0,0 "null" "weak similarity to rat omega-conotoxin-sensitive calcium channel alpha-1 subunit rbB-I" ytycr095c - 99,0,0,0 "null" "similarity to Saccharomyces kluyveri strain NRRL Y-12651" ytykr021w - 99,0,0,0 "null" "strong similarity to hypothetical protein YJL084c" ytybr124w - 99,0,0,0 "null" "questionable ORF" ytymr111c - 99,0,0,0 "null" "weak similarity to MSN1 protein" ytybr125c - 98,0,0,0 "PTC4" "serine/threonine protein phosphatases (PP2Cs)" ytydr053w - 99,0,0,0 "null" "questionable ORF" ytydr482c - 99,0,0,0 "null" "hypothetical protein" ytylr154c - 99,0,0,0 "null" "hypothetical protein" ytypr171w - 99,0,0,0 "null" "hypothetical protein" ytyfr048w - 99,0,0,0 "null" "similarity to hypothetical S.pombe protein SPAC12G12.14 and to YDL001w and YDR282c" ytyor200w - 99,0,0,0 "null" "questionable ORF" ytynl226w - 99,0,0,0 "null" "questionable ORF" ytyer186c - 99,0,0,0 "null" "weak similarity to hypothetical protein YMR316w" ytydr215c - 99,0,0,0 "null" "hypothetical protein" ytyjl049w - 99,0,0,0 "null" "similarity to PIR:T39496 hypothetical protein SPBC1604.18c S. pombe" ytylr315w - 99,0,0,0 "null" "weak similarity to rat apolipoprotein A-IV" ytynl161w - 98,0,0,0 "CBK1" "strong similarity to U.maydis Ukc1p protein kinase" ytybl044w - 99,0,0,0 "null" "hypothetical protein" ytynl228w - 99,0,0,0 "null" "questionable ORF" ytydr485c - 99,0,0,0 "null" "similarity to trichohyalin" ytypl251w - 99,0,0,0 "null" "questionable ORF" ytypl157w - 99,0,0,0 "null" "weak similarity to S.pombe hypothetical protein SPAC2G11.15c" ytylr091w - 99,0,0,0 "null" "hypothetical protein" ytynl323w - 99,0,0,0 "LEM3" "similarity to Ycx1p" ytyol027c - 99,0,0,0 "null" "similarity to YPR125w" ytylr412w - 99,0,0,0 "null" "weak similarity to Candida maltosa cytochrome P450" ytymr289w - 99,0,0,0 "null" "weak similarity to para-aminobenzoate synthase component I (EC 4.1.3.-) Campylobacter jejuni" ytyjl147c - 99,0,0,0 "null" "weak similarity to C.elegans hypothetical protein C43G2.4" ytypl253c - 99,0,0,0 "VIK1" "similarity to CIK1P" ytynl324w - 99,0,0,0 "null" "hypothetical protein" ytybl047c - 99,0,0,0 "EDE1" "similarity to mouse eps15R protein" ytygr278w - 99,0,0,0 "null" "similarity to C.elegans LET-858" ytyor205c - 99,0,0,0 "null" "hypothetical protein" ytydr153c - 99,0,0,0 "null" "weak similarity to lqf protein D. melanogaster" ytydr219c - 99,0,0,0 "null" "hypothetical protein" ytybr224w - 99,0,0,0 "null" "questionable ORF" ytybr064w - 99,0,0,0 "null" "questionable ORF" ytycr022c - 99,0,0,0 "null" "hypothetical protein" ytylr254c - 99,0,0,0 "null" "weak similarity to PIR:T10472 G-box binding protein 2A Sinapis alba" ytymr211w - 99,0,0,0 "null" "weak similarity to beta tubulins" ytydl071c - 99,0,0,0 "null" "questionable ORF" ytyol029c - 99,0,0,0 "null" "hypothetical protein" ytygl023c - 99,0,0,0 "PIB2" "phosphatidylinositol 3-phosphate binding" ytyor300w - 99,0,0,0 "null" "questionable ORF" ytykr029c - 99,0,0,0 "null" "similarity to YJL105w and Lentinula MFBA protein" ytybr066c - 99,0,0,0 "NRG2" "weak similarity to A.niger carbon catabolite repressor protein" ytylr095c - 99,0,0,0 "IOC2" "weak similarity to hypothetical protein C. elegans" ytyjl083w - 99,0,0,0 "null" "similarity to hypothetical protein YKR019c" ytyjl084c - 99,0,0,0 "null" "similarity to hypothetical protein YKR021w" ytyhr078w - 99,0,0,0 "null" "hypothetical protein" ytyer113c - 99,0,0,0 "null" "similarity to EMP70P" ytypr179c - 99,0,0,0 "PLO1" "similarity to PLO2P, weak similarity to C-terminal region of Nip80p" ytyar030c - 99,0,0,0 "null" "hypothetical protein" ytydr250c - 99,0,0,0 "null" "hypothetical protein" ytygr107w - 99,0,0,0 "null" "questionable ORF" ytycr025c - 99,0,0,0 "null" "hypothetical protein" ytyol125w - 99,0,0,0 "null" "similarity to hypothetical protein D. melanogaster" ytydl074c - 99,0,0,0 "BRE1" "weak similarity to spindle pole body protein NUF1" ytyjl086c - 99,0,0,0 "null" "questionable ORF" ytycr026c - 99,0,0,0 "null" "similarity to human autotaxin precursor" ytyar031w - 99,0,0,0 "PRM9" "strong similarity to YGL053w, FUN59P, YGL051w, FUN55P, YAR028w and YCR007c" ytymr216c - 99,0,0,0 "SKY1" "similarity to S.pombe dsk1, human SRPK1 and other protein kinases" ytykl044w - 99,0,0,0 "null" "hypothetical protein" ytydl076c - 99,0,0,0 "null" "weak similarity to hypothetical protein S. pombe" ytybl081w - 99,0,0,0 "null" "hypothetical protein" ytyjl182c - 99,0,0,0 "null" "questionable ORF" ytyel033w - 99,0,0,0 "null" "weak similarity to Sauroleishmania mitochondrial hypothetical ORF-5 protein" ------------------ Rule 896: church_below_threshold_in_all_conditions > 0 derisi_r3_ratio <= 1.89 gasch1_Heat_Shock_000_minutes__hs_2 <= 0.97 gasch1_33C_vs_30C___90_minutes > -0.57 gasch2_wt_plus_gamma_20_min > -0.306 gasch2_DES459_mec1_Plus_heat_20_min <= 0.344 -> class 40/10/0/0 "nucleus" Evaluation on training data (1638 items): ytybr245c - 4,5,1,4 "ISW1" "strong similarity to D.melanogaster iswi protein" ytykl205w 4,3,3,0 "LOS1" "pre-tRNA splicing protein" 4,7,0,0 "LOS1" "pre-tRNA splicing protein" 40,10,0,0 "LOS1" "pre-tRNA splicing protein" ytyal034w-a - 3,3,1,0 "MTW1" "determining metaphase spindle length" 40,5,0,0 "MTW1" "determining metaphase spindle length" ytypl194w - 11,1,0,0 "DDC1" "DNA damage checkpoint protein" 3,1,5,1 "DDC1" "DNA damage checkpoint protein" 3,3,1,3 "DDC1" "DNA damage checkpoint protein" ytygr140w 3,3,1,3 "CBF2" "kinetochore protein complex CBF3, 110 KD subunit" 40,10,0,0 "CBF2" "kinetochore protein complex CBF3, 110 KD subunit" ytygl043w 3,1,5,0 "DST1" "TFIIS (transcription elongation factor)" 4,5,1,1 "DST1" "TFIIS (transcription elongation factor)" 40,10,0,0 "DST1" "TFIIS (transcription elongation factor)" ytydr175c - 5,1,0,0 "RSM24" "component of the mitochondrial ribosomal small subunit" ytybr180w - 11,7,0,0 "DTR1" "dityrosine transporter" 67,28,0,0 "DTR1" "dityrosine transporter" ytynl267w 1,6,1,0 "PIK1" "phosphatidylinositol 4-kinase" 10,1,99,0 "PIK1" "phosphatidylinositol 4-kinase" 3,3,3,0 "PIK1" "phosphatidylinositol 4-kinase" 40,10,0,0 "PIK1" "phosphatidylinositol 4-kinase" ytykl222c 4,5,1,4 "null" "weak similarity to transcription factors, similarity to finger proteins YOR162c, YOR172w and YLR266c" 40,10,0,0 "null" "weak similarity to transcription factors, similarity to finger proteins YOR162c, YOR172w and YLR266c" ytyor148c - 4,5,5,1 "SPP2" "involved in pre-mRNA processing" ytypl008w 3,3,1,0 "CHL1" "protein of the DEAH box family" 40,10,0,0 "CHL1" "protein of the DEAH box family" ytykl208w - 4,5,5,5 "CBT1" "apo-cytochrome b pre-mRNA processing protein" 40,16,0,0 "CBT1" "apo-cytochrome b pre-mRNA processing protein" ytydr176w 1,5,4,0 "NGG1" "general transcriptional adaptor or co-activator" 4,5,1,4 "NGG1" "general transcriptional adaptor or co-activator" 40,10,0,0 "NGG1" "general transcriptional adaptor or co-activator" ytylr277c 4,5,5,0 "YSH1" "component of pre-mRNA polyadenylation factor PF I" 40,10,0,0 "YSH1" "component of pre-mRNA polyadenylation factor PF I" ytynl014w - 5,4,0,0 "HEF3" "translation elongation factor eEF3 homolog" 67,50,25,0 "HEF3" "translation elongation factor eEF3 homolog" ytykl209c - 14,4,3,3 "STE6" "ATP-binding cassette transporter protein" 40,2,0,0 "STE6" "ATP-binding cassette transporter protein" 67,50,25,0 "STE6" "ATP-binding cassette transporter protein" 8,16,0,0 "STE6" "ATP-binding cassette transporter protein" ytykl049c 3,3,1,0 "CSE4" "component of the core centromere" 40,10,3,0 "CSE4" "component of the core centromere" ytydr191w - 14,4,3,3 "HST4" "member of the SIR2P family of putative NAD-dependent histone deacetylases" 4,5,1,4 "HST4" "member of the SIR2P family of putative NAD-dependent histone deacetylases" ytykl143w - 11,1,0,0 "LTV1" "low-temperature viability protein" ytyhr101c - 1,5,1,0 "BIG1" "big cells phenotype" 3,3,1,0 "BIG1" "big cells phenotype" ytydr192c 4,7,0,0 "NUP42" "nuclear pore protein" 40,10,0,0 "NUP42" "nuclear pore protein" 8,1,0,0 "NUP42" "nuclear pore protein" ytyll021w - 13,11,3,7 "SPA2" "involved in cell polarity" 14,1,3,99 "SPA2" "involved in cell polarity" 14,4,3,1 "SPA2" "involved in cell polarity" 14,4,3,3 "SPA2" "involved in cell polarity" 40,4,0,0 "SPA2" "involved in cell polarity" ytylr453c 30,10,3,0 "RIF2" "RAP1P interacting factor 2" 40,10,0,0 "RIF2" "RAP1P interacting factor 2" ytyel053c - 2,13,0,0 "MAK10" "glucose-repressible protein" ytydr004w 14,4,3,3 "RAD57" "DNA repair protein" 3,1,5,1 "RAD57" "DNA repair protein" 3,3,2,0 "RAD57" "DNA repair protein" 40,10,0,0 "RAD57" "DNA repair protein" ytyfr013w - 40,3,0,0 "IOC3" "similarity to YOL017w" ytypr122w - 14,4,3,1 "AXL1" "protease" 6,7,0,0 "AXL1" "protease" ytyjr031c - 40,8,0,0 "GEA1" "GDP/GTP exchange factor for ARF" 8,7,0,0 "GEA1" "GDP/GTP exchange factor for ARF" ytyhr102w - 3,3,1,0 "KIC1" "ser/thr protein kinase that interacts with CDC31P" 30,1,0,0 "KIC1" "ser/thr protein kinase that interacts with CDC31P" 30,99,0,0 "KIC1" "ser/thr protein kinase that interacts with CDC31P" ytypl040c - 40,16,0,0 "ISM1" "isoleucine--tRNA ligase, mitochondrial" 5,10,0,0 "ISM1" "isoleucine--tRNA ligase, mitochondrial" ytykr082w 14,4,3,5 "NUP133" "nuclear pore protein" 4,7,0,0 "NUP133" "nuclear pore protein" 40,10,0,0 "NUP133" "nuclear pore protein" 8,1,0,0 "NUP133" "nuclear pore protein" ytylr026c - 40,8,0,0 "SED5" "syntaxin (T-SNARE)" 8,7,0,0 "SED5" "syntaxin (T-SNARE)" ytymr317w - 30,1,0,0 "null" "similarity to mucins, glucan 1,4-alpha-glucosidase and exo-alpha-sialidase" ytylr200w - 30,4,0,0 "YKE2" "Gim complex component" 40,3,0,0 "YKE2" "Gim complex component" 6,1,0,0 "YKE2" "Gim complex component" ytygl049c - 40,3,0,0 "TIF4632" "mRNA cap-binding protein (eIF4F), 130K subunit" 5,4,0,0 "TIF4632" "mRNA cap-binding protein (eIF4F), 130K subunit" ytyhr023w - 14,4,3,1 "MYO1" "myosin-1 isoform (type II myosin) heavy chain" 3,3,3,0 "MYO1" "myosin-1 isoform (type II myosin) heavy chain" 40,4,0,0 "MYO1" "myosin-1 isoform (type II myosin) heavy chain" 8,22,0,0 "MYO1" "myosin-1 isoform (type II myosin) heavy chain" ytymr078c 3,3,1,0 "CTF18" "required for accurate chromosome transmission in mitosis and maintenance of normal telomere length" 40,10,0,0 "CTF18" "required for accurate chromosome transmission in mitosis and maintenance of normal telomere length" ytygl063w - 1,3,10,0 "PUS2" "pseudouridine synthase 2" 4,3,6,0 "PUS2" "pseudouridine synthase 2" ytyhl007c - 13,11,3,7 "STE20" "ser/thr protein kinase of the pheromone pathway" 14,4,3,1 "STE20" "ser/thr protein kinase of the pheromone pathway" 14,4,3,3 "STE20" "ser/thr protein kinase of the pheromone pathway" 30,4,0,0 "STE20" "ser/thr protein kinase of the pheromone pathway" 40,3,0,0 "STE20" "ser/thr protein kinase of the pheromone pathway" ytyjl110c 1,2,4,0 "GZF3" "transcriptional repressor" 4,5,1,4 "GZF3" "transcriptional repressor" 40,10,0,0 "GZF3" "transcriptional repressor" ytybr186w 3,3,1,0 "PCH2" "putative ATPase" 40,10,0,0 "PCH2" "putative ATPase" ytyml076c 4,5,1,4 "null" "weak similarity to transcription factor" 40,10,0,0 "null" "weak similarity to transcription factor" ytyil073c - 14,4,3,5 "SPO22" "weak similarity to mouse polycystic kidney disease-related protein" ytydr530c - 1,3,10,0 "APA2" "ATP adenylyltransferase II" ytyil139c - 3,1,3,0 "REV7" "DNA polymerase zeta subunit" 3,1,5,1 "REV7" "DNA polymerase zeta subunit" ytyer153c - 40,16,0,0 "PET122" "translational activator of cytochrome c oxidase subunit III" 5,7,0,0 "PET122" "translational activator of cytochrome c oxidase subunit III" ytyhl022c 3,1,5,0 "SPO11" "catalytic subunit of the meiotic double strand break transesterase" 3,3,2,0 "SPO11" "catalytic subunit of the meiotic double strand break transesterase" 40,10,0,0 "SPO11" "catalytic subunit of the meiotic double strand break transesterase" ytykr085c - 40,16,0,0 "MRPL20" "ribosomal protein YmL20, mitochondrial" 5,1,0,0 "MRPL20" "ribosomal protein YmL20, mitochondrial" ytyil153w - 3,1,5,1 "RRD1" "strong similarity to human phosphotyrosyl phosphatase activator" ytygl065c - 1,5,1,0 "ALG2" "mannosyltransferase" 6,7,0,0 "ALG2" "mannosyltransferase" ytycl048w - 14,4,3,5 "null" "strong similarity to sporulation-specific protein SPS2P" 3,3,2,0 "null" "strong similarity to sporulation-specific protein SPS2P" ytypr141c - 11,1,0,0 "KAR3" "kinesin-related protein" 14,4,3,3 "KAR3" "kinesin-related protein" 3,3,1,0 "KAR3" "kinesin-related protein" 3,3,2,0 "KAR3" "kinesin-related protein" 30,10,0,0 "KAR3" "kinesin-related protein" 40,5,0,0 "KAR3" "kinesin-related protein" 6,10,0,0 "KAR3" "kinesin-related protein" 8,22,0,0 "KAR3" "kinesin-related protein" ytygl226w - 2,13,0,0 "null" "similarity to N.crassa cytochrome-c oxidase chain V" ytylr298c 4,5,5,1 "YHC1" "associated with the U1 snRNP complex" 40,10,0,0 "YHC1" "associated with the U1 snRNP complex" ytykl006c-a - 40,8,0,0 "SFT1" "SNARE-like protein" 8,7,0,0 "SFT1" "SNARE-like protein" ytydr372c - 40,3,0,0 "null" "similarity to hypothetical S. pombe protein" ytycr066w 3,1,5,1 "RAD18" "DNA repair protein" 40,10,0,0 "RAD18" "DNA repair protein" 6,7,0,0 "RAD18" "DNA repair protein" ytycr081w 1,5,4,0 "SRB8" "DNA-directed RNA polymerase II holoenzyme and Srb10 CDK subcomplex subunit" 4,5,1,1 "SRB8" "DNA-directed RNA polymerase II holoenzyme and Srb10 CDK subcomplex subunit" 40,10,0,0 "SRB8" "DNA-directed RNA polymerase II holoenzyme and Srb10 CDK subcomplex subunit" ytybr110w - 1,5,1,0 "ALG1" "beta-mannosyltransferase" 40,7,0,0 "ALG1" "beta-mannosyltransferase" 6,7,0,0 "ALG1" "beta-mannosyltransferase" ytybr030w - 1,5,1,0 "null" "weak similarity to regulatory protein MSR1P" ytybl013w - 4,3,6,0 "FMT1" "Methionyl-tRNA Transformylase" 40,16,0,0 "FMT1" "Methionyl-tRNA Transformylase" ytypl045w - 30,1,0,0 "VPS16" "vacuolar sorting protein" 30,25,0,0 "VPS16" "vacuolar sorting protein" 40,25,0,0 "VPS16" "vacuolar sorting protein" 6,4,0,0 "VPS16" "vacuolar sorting protein" 8,7,0,0 "VPS16" "vacuolar sorting protein" ytyfr019w - 1,6,1,0 "FAB1" "phosphatidylinositol 3-phosphate 5-kinase" 30,25,0,0 "FAB1" "phosphatidylinositol 3-phosphate 5-kinase" 6,4,0,0 "FAB1" "phosphatidylinositol 3-phosphate 5-kinase" 8,13,0,0 "FAB1" "phosphatidylinositol 3-phosphate 5-kinase" ytypl140c - 11,1,0,0 "MKK2" "protein kinase of the map kinase kinase (MEK) family" 14,1,3,0 "MKK2" "protein kinase of the map kinase kinase (MEK) family" 14,4,3,1 "MKK2" "protein kinase of the map kinase kinase (MEK) family" 3,3,1,0 "MKK2" "protein kinase of the map kinase kinase (MEK) family" 30,1,0,0 "MKK2" "protein kinase of the map kinase kinase (MEK) family" ytyor011w - 67,50,25,0 "AUS1" "strong similarity to ATP-dependent permeases" ytybl014c 4,1,1,0 "RRN6" "RNA polymerase I specific transcription initiation factor" 40,10,0,0 "RRN6" "RNA polymerase I specific transcription initiation factor" ytylr126c - 40,3,0,0 "null" "weak similarity to P.aeruginosa anthranilate synthase component II" ytyjr131w - 1,5,1,0 "MNS1" "alpha1,2-mannosidase" 40,7,0,0 "MNS1" "alpha1,2-mannosidase" 6,7,0,0 "MNS1" "alpha1,2-mannosidase" ytydr040c - 13,1,1,99 "ENA1" "P-type ATPase involved in Na+ and Li+ efflux" 40,7,0,0 "ENA1" "P-type ATPase involved in Na+ and Li+ efflux" 67,50,22,0 "ENA1" "P-type ATPase involved in Na+ and Li+ efflux" 8,99,0,0 "ENA1" "P-type ATPase involved in Na+ and Li+ efflux" ytykl166c - 10,1,99,0 "TPK3" "cAMP-dependent protein kinase 3, catalytic chain" 4,5,1,4 "TPK3" "cAMP-dependent protein kinase 3, catalytic chain" 40,3,0,0 "TPK3" "cAMP-dependent protein kinase 3, catalytic chain" ytydl197c - 4,5,1,4 "ASF2" "anti-silencing protein" ytyml094w - 30,4,0,0 "GIM5" "Gim complex component" 40,3,0,0 "GIM5" "Gim complex component" 6,1,0,0 "GIM5" "Gim complex component" ytyil171w - 1,5,7,0 "HXT12" "strong similarity to sugar transport proteins" 67,7,0,0 "HXT12" "strong similarity to sugar transport proteins" ytygl243w - 4,3,6,0 "TAD1" "tRNA-specific adenosine deaminase 1" ytyjl115w - 4,5,1,4 "ASF1" "anti-silencing protein" ytygr261c - 40,3,0,0 "APL6" "AP-3 complex subunit, beta3-adaptin, 91 KD" 8,19,0,0 "APL6" "AP-3 complex subunit, beta3-adaptin, 91 KD" ytymr273c - 11,1,0,0 "ZDS1" "involved in negative regulation of cell polarity" 14,4,3,1 "ZDS1" "involved in negative regulation of cell polarity" 3,3,1,0 "ZDS1" "involved in negative regulation of cell polarity" ytylr207w - 6,13,0,0 "HRD3" "involved in degradation of HMG2P" ytyhr204w - 1,5,1,0 "HTM1" "similarity to alpha-mannosidases" ytyfl033c - 4,99,0,0 "RIM15" "protein kinase involved in expression of meiotic genes" 6,7,0,0 "RIM15" "protein kinase involved in expression of meiotic genes" ytyjr119c - 4,5,1,4 "null" "similarity to human retinoblastoma binding protein 2" ytyhr124w - 3,3,2,0 "NDT80" "meiosis-specific protein" ytymr193w - 40,16,0,0 "MRPL24" "ribosomal protein of the large subunit, mitochondrial" 5,1,0,0 "MRPL24" "ribosomal protein of the large subunit, mitochondrial" ytydr028c 1,5,4,0 "REG1" "regulatory subunit for protein phosphatase GLC7P" 4,5,5,1 "REG1" "regulatory subunit for protein phosphatase GLC7P" 40,10,0,0 "REG1" "regulatory subunit for protein phosphatase GLC7P" ytyer173w - 3,1,5,0 "RAD24" "cell cycle checkpoint protein" 3,3,1,3 "RAD24" "cell cycle checkpoint protein" ytyml097c - 40,3,0,0 "VPS9" "vacuolar sorting protein" 6,4,0,0 "VPS9" "vacuolar sorting protein" 8,13,0,0 "VPS9" "vacuolar sorting protein" 8,7,0,0 "VPS9" "vacuolar sorting protein" ytypl209c - 3,3,1,0 "IPL1" "ser/thr protein kinase" ytyal059w - 30,1,0,0 "ECM1" "involved in cell wall biosynthesis" ytykl088w - 11,1,0,0 "null" "similarity to C.tropicalis hal3 protein, to C-term. of SIS2P and to hypothetical protein YOR054c" ytymr100w - 14,4,3,1 "MUB1" "involved in budding" ytyjr135c - 3,3,4,5 "MCM22" "required for maintenance of chromosomes and minichromosomes" ytylr398c 11,7,0,0 "SKI2" "antiviral protein and putative helicase" 40,10,0,0 "SKI2" "antiviral protein and putative helicase" ytykl089w 3,3,1,0 "MIF2" "required for normal chromosome segregation and spindle integrity" 40,10,3,0 "MIF2" "required for normal chromosome segregation and spindle integrity" ytyhr061c - 13,11,3,7 "GIC1" "CDC42 GTPase-binding protein" 14,1,3,99 "GIC1" "CDC42 GTPase-binding protein" 14,4,3,1 "GIC1" "CDC42 GTPase-binding protein" 14,4,3,3 "GIC1" "CDC42 GTPase-binding protein" 30,4,0,0 "GIC1" "CDC42 GTPase-binding protein" ytygl086w 3,3,1,3 "MAD1" "spindle assembly checkpoint protein" 40,10,0,0 "MAD1" "spindle assembly checkpoint protein" ytyhr047c - 1,5,4,0 "AAP1'" "alanine/arginine aminopeptidase" 2,19,0,0 "AAP1'" "alanine/arginine aminopeptidase" ytycr086w - 14,4,3,5 "CSM1" "involved in nuclear migration" 3,3,1,0 "CSM1" "involved in nuclear migration" 3,3,2,0 "CSM1" "involved in nuclear migration" ytyml098w 4,5,1,1 "TAF19" "TFIID subunit (TBP-associated factor), 19 kD" 40,10,0,0 "TAF19" "TFIID subunit (TBP-associated factor), 19 kD" ytyll061w - 1,1,7,0 "MMP1" "high affinity S-methylmethionine permease" 67,10,0,0 "MMP1" "high affinity S-methylmethionine permease" ytybr289w 1,5,4,0 "SNF5" "component of SWI/SNF transcription activator complex" 14,4,3,3 "SNF5" "component of SWI/SNF transcription activator complex" 4,5,1,4 "SNF5" "component of SWI/SNF transcription activator complex" 40,10,0,0 "SNF5" "component of SWI/SNF transcription activator complex" ytyml099c 1,1,4,0 "ARG81" "transcription factor involved in arginine metabolism" 1,2,4,0 "ARG81" "transcription factor involved in arginine metabolism" 4,5,1,4 "ARG81" "transcription factor involved in arginine metabolism" 40,10,0,0 "ARG81" "transcription factor involved in arginine metabolism" ytydl107w - 2,13,0,0 "MSS2" "ser/thr protein kinase" ytykl011c - 3,1,5,0 "CCE1" "cruciform-cutting endonuclease, mitochondrial" 40,16,0,0 "CCE1" "cruciform-cutting endonuclease, mitochondrial" ytynr059w - 1,5,1,0 "MNT4" "similarity to to alpha-1,3-mannosyltransferase" 6,7,0,0 "MNT4" "similarity to to alpha-1,3-mannosyltransferase" ytydl203c - 1,5,4,0 "null" "similarity to SKT5P" ytyjl054w - 40,16,0,0 "TIM54" "translocase for the insertion of proteins into the mitochondrial inner membrane" 6,4,0,0 "TIM54" "translocase for the insertion of proteins into the mitochondrial inner membrane" 67,99,0,0 "TIM54" "translocase for the insertion of proteins into the mitochondrial inner membrane" 8,4,0,0 "TIM54" "translocase for the insertion of proteins into the mitochondrial inner membrane" ytyjr057w - 1,3,4,0 "CDC8" "dTMP kinase" 40,3,0,0 "CDC8" "dTMP kinase" ytybr131w - 11,7,0,0 "CCZ1" "Calcium Caffeine Zinc sensitivity" ytylr306w - 6,7,0,0 "UBC12" "E2 ubiquitin-conjugating enzyme" ytypl161c - 1,5,4,0 "BEM4" "bud emergence protein" 13,11,3,7 "BEM4" "bud emergence protein" 14,1,3,99 "BEM4" "bud emergence protein" 14,4,3,1 "BEM4" "bud emergence protein" 14,4,3,3 "BEM4" "bud emergence protein" ytykl012w 4,5,5,1 "PRP40" "splicing factor" 40,10,0,0 "PRP40" "splicing factor" ytybl035c 3,1,3,0 "POL12" "DNA-directed DNA polymerase alpha, 70 KD subunit" 40,10,0,0 "POL12" "DNA-directed DNA polymerase alpha, 70 KD subunit" ytygr012w - 1,1,1,0 "null" "similarity to E.nidulans cysteine synthase" ytylr147c 4,5,5,1 "SMD3" "spliceosomal snRNA-associated Sm core protein required for pre-mRNA splicing" 4,99,0,0 "SMD3" "spliceosomal snRNA-associated Sm core protein required for pre-mRNA splicing" 40,10,0,0 "SMD3" "spliceosomal snRNA-associated Sm core protein required for pre-mRNA splicing" ytygr186w 4,5,1,1 "TFG1" "TFIIF subunit (transcription initiation factor), 105 kD" 40,10,0,0 "TFG1" "TFIIF subunit (transcription initiation factor), 105 kD" ytygl249w - 3,1,5,0 "ZIP2" "required for meiotic recombination and disjunction" 3,3,2,0 "ZIP2" "required for meiotic recombination and disjunction" ytylr067c - 4,99,0,0 "PET309" "required for stability and translation of COX1 mRNA" 40,16,0,0 "PET309" "required for stability and translation of COX1 mRNA" 5,7,0,0 "PET309" "required for stability and translation of COX1 mRNA" ytydr207c 1,1,4,0 "UME6" "negative transcriptional regulator" 1,2,4,0 "UME6" "negative transcriptional regulator" 1,6,10,0 "UME6" "negative transcriptional regulator" 3,3,1,0 "UME6" "negative transcriptional regulator" 3,3,2,0 "UME6" "negative transcriptional regulator" 4,5,1,4 "UME6" "negative transcriptional regulator" 40,10,0,0 "UME6" "negative transcriptional regulator" ytylr307w - 1,5,1,0 "CDA1" "sporulation-specific chitin deacetylase" 14,4,3,5 "CDA1" "sporulation-specific chitin deacetylase" ytyjl056c 4,5,1,4 "ZAP1" "metalloregulatory protein involved in zinc-responsive transcriptional regulation" 40,10,0,0 "ZAP1" "metalloregulatory protein involved in zinc-responsive transcriptional regulation" ytypl082c 4,5,1,4 "MOT1" "transcriptional accessory protein" 40,10,0,0 "MOT1" "transcriptional accessory protein" ytydr061w - 3,1,5,1 "null" "similarity to E.coli modF and photorepair protein phrA" ytyfl053w - 1,5,1,0 "DAK2" "dihydroxyacetone kinase" 11,1,0,0 "DAK2" "dihydroxyacetone kinase" ytygr188c 3,3,1,3 "BUB1" "ser/thr protein kinase" 40,10,0,0 "BUB1" "ser/thr protein kinase" ytybr119w 4,5,5,1 "MUD1" "U1 snRNP-specific A protein" 40,10,0,0 "MUD1" "U1 snRNP-specific A protein" ytymr026c - 40,19,0,0 "PEX12" "required for biogenesis of peroxisomes - peroxin" ytymr294w - 3,3,1,0 "JNM1" "mitosis protein, involved in nuclear migration" 40,5,0,0 "JNM1" "mitosis protein, involved in nuclear migration" 8,22,0,0 "JNM1" "mitosis protein, involved in nuclear migration" ytyol018c - 30,25,0,0 "TLG2" "member of the syntaxin family of t-SNAREs" 40,22,0,0 "TLG2" "member of the syntaxin family of t-SNAREs" 40,25,0,0 "TLG2" "member of the syntaxin family of t-SNAREs" 6,4,0,0 "TLG2" "member of the syntaxin family of t-SNAREs" 8,13,0,0 "TLG2" "member of the syntaxin family of t-SNAREs" 8,19,0,0 "TLG2" "member of the syntaxin family of t-SNAREs" 8,7,0,0 "TLG2" "member of the syntaxin family of t-SNAREs" ytypr180w - 6,13,1,0 "AOS1" "forms together with UBA2P a heterodimeric activating enzyme for SMT3P" 6,7,0,0 "AOS1" "forms together with UBA2P a heterodimeric activating enzyme for SMT3P" ytypl243w - 40,3,0,0 "SRP68" "signal recognition particle protein" 6,4,0,0 "SRP68" "signal recognition particle protein" ytylr403w 14,1,0,0 "SFP1" "zinc finger protein" 3,3,1,0 "SFP1" "zinc finger protein" 40,10,0,0 "SFP1" "zinc finger protein" ytyil006w - 1,7,10,0 "null" "similarity to FLX1P" 67,99,0,0 "null" "similarity to FLX1P" 8,4,0,0 "null" "similarity to FLX1P" ytyir009w - 4,5,5,1 "MSL1" "U2 snRNA-associated protein with similarity to U2B" 6,10,0,0 "MSL1" "U2 snRNA-associated protein with similarity to U2B" ytyal001c 4,1,1,0 "TFC3" "TFIIIC (transcription initiation factor) subunit, 138 kD" 4,3,1,0 "TFC3" "TFIIIC (transcription initiation factor) subunit, 138 kD" 40,10,0,0 "TFC3" "TFIIIC (transcription initiation factor) subunit, 138 kD" ytygr030c 4,1,4,0 "POP6" "required for processing of tRNAs and rRNAs" 4,3,3,0 "POP6" "required for processing of tRNAs and rRNAs" 40,10,0,0 "POP6" "required for processing of tRNAs and rRNAs" ytykr019c - 4,1,99,0 "IRS4" "Increased rDNA silencing" ytyjl139c - 1,5,1,0 "YUR1" "mannosyltransferase" 40,8,0,0 "YUR1" "mannosyltransferase" ytyer007w - 3,3,1,0 "PAC2" "involved in the stabilization of microtubles" 40,4,0,0 "PAC2" "involved in the stabilization of microtubles" ytynl250w 3,1,5,1 "RAD50" "DNA repair protein" 3,3,2,0 "RAD50" "DNA repair protein" 40,10,0,0 "RAD50" "DNA repair protein" ytylr165c - 1,3,0,0 "PUS5" "RNA:pseudouridine (Psi)-synthase" ytyjl219w - 1,5,7,0 "HXT9" "hexose transport protein" 40,2,0,0 "HXT9" "hexose transport protein" 67,7,0,0 "HXT9" "hexose transport protein" 8,19,0,0 "HXT9" "hexose transport protein" ytykl017c - 3,3,1,0 "HCS1" "DNA helicase A" 3,3,2,0 "HCS1" "DNA helicase A" ytyml120c - 2,13,0,0 "NDI1" "NADH-ubiquinone-6 oxidoreductase" 40,16,0,0 "NDI1" "NADH-ubiquinone-6 oxidoreductase" ytybr136w - 3,1,5,0 "MEC1" "cell cycle checkpoint protein" 3,3,1,3 "MEC1" "cell cycle checkpoint protein" 3,3,2,0 "MEC1" "cell cycle checkpoint protein" ytycr014c 3,1,5,0 "POL4" "DNA polymerase" 40,10,0,0 "POL4" "DNA polymerase" ytydr145w - 4,5,1,1 "TAF61" "TFIID and SAGA subunit" 4,5,1,4 "TAF61" "TFIID and SAGA subunit" ytykr034w 1,2,4,0 "DAL80" "transcriptional repressor for allantoin and GABA catabolic genes" 4,5,1,4 "DAL80" "transcriptional repressor for allantoin and GABA catabolic genes" 40,10,0,0 "DAL80" "transcriptional repressor for allantoin and GABA catabolic genes" ytygl014w - 4,99,0,0 "PUF4" "similarity to Drosophila pumilio protein and MPT5P protein" ytydr240c 4,5,5,1 "SNU56" "U1 snRNA protein, no counterpart in mammalian snRNP" 40,10,0,0 "SNU56" "U1 snRNA protein, no counterpart in mammalian snRNP" ytykl032c 4,5,1,4 "IXR1" "intrastrand crosslink recognition protein and transcription factor" 40,10,0,0 "IXR1" "intrastrand crosslink recognition protein and transcription factor" ytylr086w - 30,10,3,0 "SMC4" "Stable Maintenance of Chromosomes" ytydr080w - 40,25,0,0 "VPS41" "required for the vacuolar assembly" 6,10,0,0 "VPS41" "required for the vacuolar assembly" ytynl172w 3,3,1,0 "APC1" "subunit of anaphase-promoting complex (cyclosome)" 40,10,0,0 "APC1" "subunit of anaphase-promoting complex (cyclosome)" 6,13,1,0 "APC1" "subunit of anaphase-promoting complex (cyclosome)" 6,7,0,0 "APC1" "subunit of anaphase-promoting complex (cyclosome)" ytylr341w - 67,4,1,2 "SPO77" "probably ATP-powered Ca2+ pump, possible role in sporulation" ytyjl170c - 14,4,3,3 "ASG7" "weak similarity to Helicobacter pylori endonuclease III" ytypl248c 1,5,4,0 "GAL4" "transcription factor" 4,5,1,4 "GAL4" "transcription factor" 40,10,0,0 "GAL4" "transcription factor" ytylr262c - 40,8,0,0 "YPT6" "GTP-binding protein of the rab family" 8,7,0,0 "YPT6" "GTP-binding protein of the rab family" ytyer105c 40,10,0,0 "NUP157" "nuclear pore protein" 8,1,0,0 "NUP157" "nuclear pore protein" ytylr168c - 40,16,0,0 "(MSF1)" "probably involved in intramitochondrial protein sorting" 6,4,0,0 "(MSF1)" "probably involved in intramitochondrial protein sorting" ytygl016w 30,10,0,0 "KAP122" "Member of the karyopherin-beta family, nuclear import" 40,10,0,0 "KAP122" "Member of the karyopherin-beta family, nuclear import" 6,4,0,0 "KAP122" "Member of the karyopherin-beta family, nuclear import" 8,1,0,0 "KAP122" "Member of the karyopherin-beta family, nuclear import" ytydr162c - 6,10,0,0 "NBP2" "NAP1P-binding protein" ytykl114c 3,1,5,1 "APN1" "AP endonuclease" 40,10,0,0 "APN1" "AP endonuclease" ytydl065c - 40,19,0,0 "PEX19" "required for biogenesis of peroxisomes - peroxin" 40,3,0,0 "PEX19" "required for biogenesis of peroxisomes - peroxin" ytybr233w - 4,99,0,0 "PBP2" "PAB1 binding protein" ytylr182w 3,1,3,0 "SWI6" "transcription factor" 3,1,5,0 "SWI6" "transcription factor" 3,3,1,0 "SWI6" "transcription factor" 30,1,0,0 "SWI6" "transcription factor" 4,5,1,4 "SWI6" "transcription factor" 40,10,0,0 "SWI6" "transcription factor" ytymr060c - 1,6,1,0 "TOM37" "mitochondrial outer membrane import receptor subunit, 37 kD" 40,16,0,0 "TOM37" "mitochondrial outer membrane import receptor subunit, 37 kD" 6,4,0,0 "TOM37" "mitochondrial outer membrane import receptor subunit, 37 kD" 67,99,0,0 "TOM37" "mitochondrial outer membrane import receptor subunit, 37 kD" 8,4,0,0 "TOM37" "mitochondrial outer membrane import receptor subunit, 37 kD" ytyml043c 4,1,1,0 "RRN11" "RNA polymerase I specific transcription initiation factor" 40,10,0,0 "RRN11" "RNA polymerase I specific transcription initiation factor" ytypr186c 4,1,1,0 "PZF1" "TFIIIA (transcription initiation factor)" 4,3,1,0 "PZF1" "TFIIIA (transcription initiation factor)" 40,10,0,0 "PZF1" "TFIIIA (transcription initiation factor)" ytyil026c - 3,3,1,0 "IRR1" "essential protein" 40,3,0,0 "IRR1" "essential protein" ytygr288w 1,5,4,0 "MAL13" "maltose pathway regulatory protein" 4,5,1,4 "MAL13" "maltose pathway regulatory protein" 40,10,0,0 "MAL13" "maltose pathway regulatory protein" ytykr052c - 4,5,5,1 "MRS4" "RNA splicing protein and member of the mitochondrial carrier family (MCF)" 40,16,0,0 "MRS4" "RNA splicing protein and member of the mitochondrial carrier family (MCF)" 8,4,0,0 "MRS4" "RNA splicing protein and member of the mitochondrial carrier family (MCF)" ytylr010c - 3,1,3,0 "TEN1" "involved in telomere length regulation and telomere end protection" ytycr032w - 8,16,0,0 "BPH1" "similarity to human beige-like protein and mouse lysosomal trafficking regulator" ytydr164c - 40,4,0,0 "SEC1" "protein transport protein" 8,16,0,0 "SEC1" "protein transport protein" ytyjl093c - 13,1,1,99 "TOK1" "outward-rectifier potassium channel" 40,2,0,0 "TOK1" "outward-rectifier potassium channel" 67,1,1,0 "TOK1" "outward-rectifier potassium channel" 8,16,0,0 "TOK1" "outward-rectifier potassium channel" ytydr244w - 40,19,0,0 "PEX5" "peroxisomal targeting signal receptor" 40,3,0,0 "PEX5" "peroxisomal targeting signal receptor" 6,4,0,0 "PEX5" "peroxisomal targeting signal receptor" 8,10,0,0 "PEX5" "peroxisomal targeting signal receptor" ytydr325w - 3,3,4,3 "YCG1" "Yeast Condensin G" ytybl074c 4,5,5,1 "AAR2" "A1 cistron splicing factor" 40,10,0,0 "AAR2" "A1 cistron splicing factor" ytylr266c 4,5,1,4 "null" "weak similarity to transcription factors" 40,10,0,0 "null" "weak similarity to transcription factors" ytynl272c - 40,3,0,0 "SEC2" "protein transport protein" 40,9,0,0 "SEC2" "protein transport protein" 8,16,0,0 "SEC2" "protein transport protein" 8,7,0,0 "SEC2" "protein transport protein" ytymr223w - 6,13,1,0 "UBP8" "similarity to mouse deubiquitinating enzyme and UBP13P,UBP9,DOA4P" 6,7,0,0 "UBP8" "similarity to mouse deubiquitinating enzyme and UBP13P,UBP9,DOA4P" ytybr251w - 40,16,0,0 "MRPS5" "ribosomal protein S5, mitochondrial" 5,1,0,0 "MRPS5" "ribosomal protein S5, mitochondrial" ytymr063w - 14,4,3,1 "RIM9" "regulator for sporulation and invasive growth" 14,4,3,5 "RIM9" "regulator for sporulation and invasive growth" ytydr420w - 1,5,4,0 "HKR1" "Hansenula MrakII k9 killer toxin-resistance protein" 40,2,0,0 "HKR1" "Hansenula MrakII k9 killer toxin-resistance protein" ytypr189w 11,99,0,0 "SKI3" "antiviral protein" 40,10,0,0 "SKI3" "antiviral protein" ytyml061c 3,1,5,1 "PIF1" "DNA helicase involved in mitochondrial DNA repair and telomere length" 40,10,0,0 "PIF1" "DNA helicase involved in mitochondrial DNA repair and telomere length" 40,16,0,0 "PIF1" "DNA helicase involved in mitochondrial DNA repair and telomere length" ytybr172c - 40,4,0,0 "SMY2" "kinesin-related protein" 8,22,0,0 "SMY2" "kinesin-related protein" ytydr180w 3,3,1,0 "SCC2" "involved in sister chromatid cohesion" 40,10,0,0 "SCC2" "involved in sister chromatid cohesion" ytydr246w - 40,8,0,0 "TRS23" "TRAPP subunit of 20 kDa involved in targeting and fusion of ER to golgi transport vesicles" 8,7,0,0 "TRS23" "TRAPP subunit of 20 kDa involved in targeting and fusion of ER to golgi transport vesicles" ytykr055w - 14,4,3,1 "RHO4" "GTP-binding protein of the rho family" ytydl164c 3,1,3,0 "CDC9" "DNA ligase" 3,1,5,1 "CDC9" "DNA ligase" 40,10,0,0 "CDC9" "DNA ligase" ytykl119c - 40,7,0,0 "VPH2" "H+-ATPase assembly protein" 6,10,0,0 "VPH2" "H+-ATPase assembly protein" ytygr119c 40,10,0,0 "NUP57" "nuclear pore protein" 8,1,0,0 "NUP57" "nuclear pore protein" ytyhr184w 14,4,3,5 "SSP1" "essential for meiosis and spore formation" 3,3,2,0 "SSP1" "essential for meiosis and spore formation" 40,10,0,0 "SSP1" "essential for meiosis and spore formation" ytynl273w - 3,1,5,0 "TOF1" "topoisomerase I interacting factor 1" ytylr188w - 67,50,25,0 "MDL1" "ATP-binding cassette transporter family member" ytyml049c - 4,5,5,1 "RSE1" "involved in RNA splicing and ER to Golgi transport" 8,7,0,0 "RSE1" "involved in RNA splicing and ER to Golgi transport" ytykl215c - 1,1,1,0 "null" "similarity to P. aeruginosa hyuA and hyuB" ytyal026c - 40,8,0,0 "DRS2" "P-type amino-phospholipids-ATPase" 67,4,1,2 "DRS2" "P-type amino-phospholipids-ATPase" 67,50,22,0 "DRS2" "P-type amino-phospholipids-ATPase" 8,7,0,0 "DRS2" "P-type amino-phospholipids-ATPase" ytymr306w - 1,5,1,0 "FKS3" "similarity to 1,3-beta-glucan synthases" ytyjr006w 3,1,3,0 "HYS2" "DNA-directed DNA polymerase delta, 55 KD subunit" 3,1,5,1 "HYS2" "DNA-directed DNA polymerase delta, 55 KD subunit" 40,10,0,0 "HYS2" "DNA-directed DNA polymerase delta, 55 KD subunit" ytyjr021c 3,1,5,0 "REC107" "meiotic recombination protein" 3,3,2,0 "REC107" "meiotic recombination protein" 40,10,0,0 "REC107" "meiotic recombination protein" ytypl189w - 67,7,99,0 "GUP2" "putative glycerol transporter involved in active glycerol uptake" ytymr227c 4,5,1,1 "TAF67" "TFIID subunit (TBP-associated factor), 67 kD" 40,10,0,0 "TAF67" "TFIID subunit (TBP-associated factor), 67 kD" ytyil061c 4,5,5,1 "SNP1" "U1 small nuclear ribonucleoprotein" 40,10,0,0 "SNP1" "U1 small nuclear ribonucleoprotein" ytyor330c - 3,1,3,0 "MIP1" "DNA-directed DNA polymerase gamma catalytic subunit, mitochondrial" 40,16,0,0 "MIP1" "DNA-directed DNA polymerase gamma catalytic subunit, mitochondrial" ytyll013c - 1,3,16,1 "PUF3" "transcript-specific regulator of mRNA degradation" ytyer047c 40,10,0,0 "SAP1" "member of the AAA-protein family" 6,13,0,0 "SAP1" "member of the AAA-protein family" ytyjl098w - 14,4,3,1 "SAP185" "SIT4P-associating protein" 3,3,1,0 "SAP185" "SIT4P-associating protein" ytypl016w 1,5,4,0 "SWI1" "component of SWI/SNF global transcription activator complex" 14,4,3,3 "SWI1" "component of SWI/SNF global transcription activator complex" 4,5,1,4 "SWI1" "component of SWI/SNF global transcription activator complex" 40,10,0,0 "SWI1" "component of SWI/SNF global transcription activator complex" ytybl093c 11,1,0,0 "ROX3" "transcription factor" 4,5,1,4 "ROX3" "transcription factor" 40,10,0,0 "ROX3" "transcription factor" ytygr230w - 3,3,1,0 "BNS1" "Bypasses Need for SPO12P" ytyor171c - 1,6,1,0 "LCB4" "sphingolipid long chain base kinase" ytygr056w 3,1,9,5 "RSC1" "member of RSC complex, which remodels the structure of chromatin" 40,10,3,0 "RSC1" "member of RSC complex, which remodels the structure of chromatin" ytyjl005w - 1,3,10,0 "CYR1" "adenylate cyclase" 10,1,9,0 "CYR1" "adenylate cyclase" 13,11,3,1 "CYR1" "adenylate cyclase" 14,4,3,5 "CYR1" "adenylate cyclase" 3,3,1,0 "CYR1" "adenylate cyclase" 40,2,0,0 "CYR1" "adenylate cyclase" ytyml065w 14,4,3,3 "ORC1" "origin recognition complex, 104 KD subunit" 3,1,3,0 "ORC1" "origin recognition complex, 104 KD subunit" 4,5,1,4 "ORC1" "origin recognition complex, 104 KD subunit" 40,10,0,0 "ORC1" "origin recognition complex, 104 KD subunit" ytynl197c - 14,1,0,0 "WHI3" "involved in regulation of cell size" 14,4,3,1 "WHI3" "involved in regulation of cell size" ytyhr014w - 3,3,2,0 "SPO13" "meiosis-specific protein" ytyjl194w 3,1,3,0 "CDC6" "cell division control protein" 3,3,1,0 "CDC6" "cell division control protein" 30,2,0,0 "CDC6" "cell division control protein" 40,10,0,0 "CDC6" "cell division control protein" 40,3,0,0 "CDC6" "cell division control protein" ytygr152c - 14,4,3,1 "RSR1" "GTP-binding protein" 40,2,0,0 "RSR1" "GTP-binding protein" ytybr257w 4,1,4,0 "POP4" "involved in processing of tRNAs and rRNAs" 4,3,3,0 "POP4" "involved in processing of tRNAs and rRNAs" 40,10,0,0 "POP4" "involved in processing of tRNAs and rRNAs" ytylr032w 3,1,5,1 "RAD5" "DNA helicase" 40,10,0,0 "RAD5" "DNA helicase" ytyhr015w - 4,5,5,0 "MIP6" "similarity to PES4 a PAB-like protein" 5,4,0,0 "MIP6" "similarity to PES4 a PAB-like protein" ytyhr189w - 5,99,0,0 "null" "similarity to peptidyl-tRNA hydrolases" ytyer144c - 6,13,1,0 "UBP5" "ubiquitin-specific protease" ytydr507c - 14,4,3,1 "GIN4" "ser/thr protein kinase" 3,3,1,0 "GIN4" "ser/thr protein kinase" 3,3,3,0 "GIN4" "ser/thr protein kinase" ytylr382c - 4,5,5,1 "NAM2" "leucine--tRNA ligase precursor, mitochondrial" 40,16,0,0 "NAM2" "leucine--tRNA ligase precursor, mitochondrial" 5,10,0,0 "NAM2" "leucine--tRNA ligase precursor, mitochondrial" ytylr288c - 3,1,5,1 "MEC3" "G2-specific checkpoint protein" 3,3,1,3 "MEC3" "G2-specific checkpoint protein" 30,1,0,0 "MEC3" "G2-specific checkpoint protein" ytyer065c - 1,5,1,0 "ICL1" "isocitrate lyase" 2,1,0,0 "ICL1" "isocitrate lyase" 2,22,0,0 "ICL1" "isocitrate lyase" 40,3,0,0 "ICL1" "isocitrate lyase" ytyhr031c - 3,1,5,0 "RRM3" "DNA helicase involved in rDNA replication and Ty1 transposition" ytygr059w - 14,4,3,5 "SPR3" "sporulation-specific septin" 40,4,0,0 "SPR3" "sporulation-specific septin" ytyjl023c - 40,16,0,0 "PET130" "protein synthesis protein, mitochondrial" 5,99,0,0 "PET130" "protein synthesis protein, mitochondrial" ytyol091w - 3,3,2,0 "SPO21" "component of the meiotic plaque, required for formation of the prospore membrane" ytyhr111w - 1,7,1,0 "null" "similarity to molybdopterin biosynthesis proteins" ytyll017w - 3,3,1,0 "null" "maybe part of SCD25" ytymr166c - 8,4,0,0 "null" "similarity to members of the mitochondrial carrier protein family" ytykl154w - 40,7,0,0 "SRP102" "signal recognition particle receptor, beta chain" 6,4,0,0 "SRP102" "signal recognition particle receptor, beta chain" ytyjr040w - 13,1,3,5 "GEF1" "voltage-gated chloride channel protein" 40,2,0,0 "GEF1" "voltage-gated chloride channel protein" 67,4,7,0 "GEF1" "voltage-gated chloride channel protein" 8,19,0,0 "GEF1" "voltage-gated chloride channel protein" ytydr283c - 40,3,0,0 "GCN2" "ser/thr protein kinase" 5,7,0,0 "GCN2" "ser/thr protein kinase" ytylr383w - 3,1,5,0 "RHC18" "recombination repair protein" ytyml069w 3,1,5,0 "POB3" "protein that binds to DNA polymerase I (PolI)" 4,5,0,0 "POB3" "protein that binds to DNA polymerase I (PolI)" 40,10,0,0 "POB3" "protein that binds to DNA polymerase I (PolI)" ytybl097w - 3,3,1,0 "BRN1" "functional homologue of human BRRN1" ytybr275c 4,5,1,4 "RIF1" "RAP1-interacting factor 1" 40,10,3,0 "RIF1" "RAP1-interacting factor 1" ytyer161c 4,5,1,4 "SPT2" "multifunctional HMG-like chromatin protein" 40,10,3,0 "SPT2" "multifunctional HMG-like chromatin protein" ytyel064c - 67,99,0,0 "null" "similarity to YBL089w" ytyhl016c - 13,1,1,99 "DUR3" "urea transport protein" 13,1,3,99 "DUR3" "urea transport protein" 40,2,0,0 "DUR3" "urea transport protein" 67,4,1,2 "DUR3" "urea transport protein" 67,4,7,0 "DUR3" "urea transport protein" ytyal047c - 3,3,1,0 "SPC72" "STU2P Interactant" ytymr182c 4,5,1,4 "RGM1" "transcriptional repressor protein" 40,10,0,0 "RGM1" "transcriptional repressor protein" ytyer162c 3,1,5,1 "RAD4" "excision repair protein" 40,10,0,0 "RAD4" "excision repair protein" ytyjr122w 4,5,1,4 "CAF17" "CCR4 associated factor" 40,10,0,0 "CAF17" "CCR4 associated factor" ytypr054w - 10,1,99,0 "SMK1" "sporulation-specific MAP kinase" 14,4,3,5 "SMK1" "sporulation-specific MAP kinase" ytymr183c - 40,2,0,0 "SSO2" "syntaxin (T-SNARE)" 8,7,0,0 "SSO2" "syntaxin (T-SNARE)" ytyel065w - 11,7,0,0 "SIT1" "probable multidrug resistance protein" 67,28,0,0 "SIT1" "probable multidrug resistance protein" 67,4,1,1 "SIT1" "probable multidrug resistance protein" ytyil149c - 40,4,0,0 "MLP2" "involved in translocation of macromolecules between the nucleoplasm and the NPC" 8,1,0,0 "MLP2" "involved in translocation of macromolecules between the nucleoplasm and the NPC" ytynr060w - 13,1,1,1 "FRE4" "strong similarity to FRE2P, and similarity to FRE1P" ytykl092c - 14,4,3,1 "BUD2" "GTPase-activating protein for Bud1p/RSR1P" ytygr238c - 13,11,3,7 "KEL2" "involved in cell fusion and morphogenesis" 14,4,3,1 "KEL2" "involved in cell fusion and morphogenesis" 14,4,3,3 "KEL2" "involved in cell fusion and morphogenesis" 40,3,0,0 "KEL2" "involved in cell fusion and morphogenesis" ytydr460w - 3,1,5,1 "TFB3" "TFIIH subunit (transcription/repair factor)" 4,5,1,1 "TFB3" "TFIIH subunit (transcription/repair factor)" 6,10,0,0 "TFB3" "TFIIH subunit (transcription/repair factor)" ytypl133c 4,99,0,0 "null" "weak similarity to transcription factors" 40,10,0,0 "null" "weak similarity to transcription factors" ytykr095w 3,1,5,1 "MLP1" "myosin-like protein related to USO1P" 40,10,0,0 "MLP1" "myosin-like protein related to USO1P" ytyjl201w - 30,1,0,0 "ECM25" "involved in cell wall biogenesis and architecture" ytypl213w - 4,5,5,1 "LEA1" "U2 A' snRNP protein" 6,10,0,0 "LEA1" "U2 A' snRNP protein" ytyfr027w - 3,1,3,0 "ECO1" "involved in sister chromatid cohesion during replication" 3,3,1,0 "ECO1" "involved in sister chromatid cohesion during replication" ytyfl025c - 40,7,0,0 "BST1" "negative regulator of COPII vesicle formation" 8,7,0,0 "BST1" "negative regulator of COPII vesicle formation" ytydl030w 4,5,5,1 "PRP9" "pre-mRNA splicing factor (snRNA-associated protein)" 40,10,0,0 "PRP9" "pre-mRNA splicing factor (snRNA-associated protein)" ytykr002w 4,5,5,0 "PAP1" "poly(A) polymerase" 40,10,0,0 "PAP1" "poly(A) polymerase" ytygl090w 14,4,3,5 "LIF1" "DNA ligase IV interacting factor" 3,1,5,1 "LIF1" "DNA ligase IV interacting factor" 3,3,2,0 "LIF1" "DNA ligase IV interacting factor" 40,10,0,0 "LIF1" "DNA ligase IV interacting factor" ytygl251c 4,99,0,0 "HFM1" "DNA/RNA helicase" 40,10,0,0 "HFM1" "DNA/RNA helicase" ytygl237c 4,5,1,4 "HAP2" "CCAAT-binding factor subunit" 40,10,0,0 "HAP2" "CCAAT-binding factor subunit" ytyjr140c - 3,3,1,0 "HIR3" "involved in cell cycle regulation of histone transcription" 4,5,1,4 "HIR3" "involved in cell cycle regulation of histone transcription" ytybl023c 3,1,3,0 "MCM2" "member of the MCM2P,MCM3P,CDC46P family" 40,10,0,0 "MCM2" "member of the MCM2P,MCM3P,CDC46P family" 40,3,0,0 "MCM2" "member of the MCM2P,MCM3P,CDC46P family" ytyer180c - 3,3,2,0 "ISC10" "meiosis-specific protein" ytylr389c - 14,4,3,3 "STE23" "protease involved in a-factor processing" 6,7,0,0 "STE23" "protease involved in a-factor processing" ytyjl203w 4,5,5,1 "PRP21" "pre-mRNA splicing factor" 40,10,0,0 "PRP21" "pre-mRNA splicing factor" 6,10,0,0 "PRP21" "pre-mRNA splicing factor" ytylr055c 4,5,1,4 "SPT8" "transcriptional adaptor or co-activator" 40,10,0,0 "SPT8" "transcriptional adaptor or co-activator" ytyjr060w 1,1,4,0 "CBF1" "kinetochore protein" 1,2,4,0 "CBF1" "kinetochore protein" 3,3,1,0 "CBF1" "kinetochore protein" 30,10,0,0 "CBF1" "kinetochore protein" 4,5,1,4 "CBF1" "kinetochore protein" 40,10,3,0 "CBF1" "kinetochore protein" ytyhr118c 14,4,3,3 "ORC6" "origin recognition complex, 50 KD subunit" 3,1,3,0 "ORC6" "origin recognition complex, 50 KD subunit" 4,5,1,4 "ORC6" "origin recognition complex, 50 KD subunit" 40,10,0,0 "ORC6" "origin recognition complex, 50 KD subunit" ytybr040w - 14,4,3,3 "FIG1" "required for efficient mating" 40,1,0,0 "FIG1" "required for efficient mating" ytyfr029w - 4,5,1,4 "PTR3" "regulator of expression of the PTR2, GAP1 and BAP2 genes" ytyhr038w - 40,16,0,0 "FIL1" "Killed in Mutagen, sensitive to Diepoxybutane and/or Mitomycin C" 5,99,0,0 "FIL1" "Killed in Mutagen, sensitive to Diepoxybutane and/or Mitomycin C" ytykl095w 40,10,0,0 "YJU2" "similarity to C.elegans hypothetical proteins" ytygl092w 4,3,3,0 "NUP145" "nuclear pore protein" 4,7,0,0 "NUP145" "nuclear pore protein" 40,10,0,0 "NUP145" "nuclear pore protein" 8,1,0,0 "NUP145" "nuclear pore protein" ytygl158w - 3,3,1,0 "RCK1" "ser/thr protein kinase" ytyal067c - 67,4,7,0 "SEO1" "suppressor of sulfoxyde ethionine resistance" 67,99,0,0 "SEO1" "suppressor of sulfoxyde ethionine resistance" ytymr282c - 1,4,1,0 "AEP2" "required for the expression of subunit-9 of atp synthase" 2,13,0,0 "AEP2" "required for the expression of subunit-9 of atp synthase" 40,16,0,0 "AEP2" "required for the expression of subunit-9 of atp synthase" 5,7,0,0 "AEP2" "required for the expression of subunit-9 of atp synthase" ytylr071c 1,5,4,0 "RGR1" "DNA-directed RNA polymerase II holoenzyme subunit" 14,4,3,1 "RGR1" "DNA-directed RNA polymerase II holoenzyme subunit" 14,4,3,3 "RGR1" "DNA-directed RNA polymerase II holoenzyme subunit" 2,19,0,0 "RGR1" "DNA-directed RNA polymerase II holoenzyme subunit" 4,5,1,1 "RGR1" "DNA-directed RNA polymerase II holoenzyme subunit" 40,10,0,0 "RGR1" "DNA-directed RNA polymerase II holoenzyme subunit" ytyll054c - 4,5,1,4 "null" "similarity to transcription factor PIP2P" ytykr099w 1,1,4,0 "BAS1" "transcription factor" 1,3,13,0 "BAS1" "transcription factor" 4,5,1,4 "BAS1" "transcription factor" 40,10,0,0 "BAS1" "transcription factor" ytygr096w - 1,3,19,0 "null" "hypothetical mitochondrial transport protein" 67,16,0,0 "null" "hypothetical mitochondrial transport protein" 8,4,0,0 "null" "hypothetical mitochondrial transport protein" ytygl094c - 4,5,5,0 "PAN2" "component of PAB1P-stimulated poly(A) ribonuclease" 5,4,0,0 "PAN2" "component of PAB1P-stimulated poly(A) ribonuclease" ytyil168w - 1,1,10,0 "SDL1" "serine dehydratase" ytyfl029c - 3,3,1,0 "CAK1" "cdk-activating protein kinase" ytyor372c - 3,3,1,0 "NDD1" "protein required for nuclear division" 3,3,3,0 "NDD1" "protein required for nuclear division" ytygl254w 1,2,4,0 "FZF1" "sulfite resistance protein" 11,7,0,0 "FZF1" "sulfite resistance protein" 4,5,1,4 "FZF1" "sulfite resistance protein" 40,10,0,0 "FZF1" "sulfite resistance protein" ytycr094w - 3,3,1,0 "CDC50" "cell division cycle mutant" ytyhl038c - 4,5,5,1 "CBP2" "apo-cytochrome b pre-mRNA processing protein 2" 40,16,0,0 "CBP2" "apo-cytochrome b pre-mRNA processing protein 2" ytypl072w - 6,13,0,0 "UBP16" "weak similarity to UBP11P" ytygr098c 3,3,1,0 "ESP1" "required for sister chromatid separation" 40,10,0,0 "ESP1" "required for sister chromatid separation" ytymr016c 10,1,99,0 "SOK2" "regulatory protein in the PKA signal transduction pathway" 14,4,3,1 "SOK2" "regulatory protein in the PKA signal transduction pathway" 4,5,1,4 "SOK2" "regulatory protein in the PKA signal transduction pathway" 40,10,0,0 "SOK2" "regulatory protein in the PKA signal transduction pathway" ytylr313c - 14,4,3,1 "SPH1" "required for bipolar bud site selection" 40,3,0,0 "SPH1" "required for bipolar bud site selection" ytykl005c 4,99,0,0 "null" "weak similarity to YKR029c and D.melanogaster transcription elongation factor DmS-II" 40,10,0,0 "null" "weak similarity to YKR029c and D.melanogaster transcription elongation factor DmS-II" ytykl179c - 3,3,1,0 "null" "similarity to NUF1P" 30,4,0,0 "null" "similarity to NUF1P" ytygr005c 4,5,1,1 "TFG2" "TFIIF subunit (transcription initiation factor), 54 kD" 40,10,0,0 "TFG2" "TFIIF subunit (transcription initiation factor), 54 kD" ytydl210w - 1,2,1,0 "UGA4" "GABA-specific high-affinity permease" 40,2,0,0 "UGA4" "GABA-specific high-affinity permease" 67,10,0,0 "UGA4" "GABA-specific high-affinity permease" 8,19,0,0 "UGA4" "GABA-specific high-affinity permease" ytylr314c - 14,4,3,1 "CDC3" "cell division control protein" 14,4,3,3 "CDC3" "cell division control protein" 3,3,1,0 "CDC3" "cell division control protein" 3,3,3,0 "CDC3" "cell division control protein" 40,4,0,0 "CDC3" "cell division control protein" ytygr099w 40,10,3,0 "TEL2" "involved in controlling telomere length and position effect" ytygl257c - 1,5,1,0 "MNT2" "alpha-1,3-mannosyltransferases responsible for adding the terminal mannose residues of O-linked oligosaccharides" 6,7,0,0 "MNT2" "alpha-1,3-mannosyltransferases responsible for adding the terminal mannose residues of O-linked oligosaccharides" ytymr017w - 14,4,3,5 "SPO20" "DBF2P interacting protein" 8,7,0,0 "SPO20" "DBF2P interacting protein" ytylr234w 3,3,1,0 "TOP3" "DNA topoisomerase III" 3,3,2,0 "TOP3" "DNA topoisomerase III" 40,10,0,0 "TOP3" "DNA topoisomerase III" ytybr299w - 1,5,1,0 "MAL32" "alpha-glucosidase" 2,19,0,0 "MAL32" "alpha-glucosidase" 40,3,0,0 "MAL32" "alpha-glucosidase" ytynr069c - 6,13,0,0 "null" "similarity to central part of BUL1P" ytyol104c 3,3,2,0 "NDJ1" "meiotic telomere protein" 40,10,3,0 "NDJ1" "meiotic telomere protein" ytygr006w 4,5,5,1 "PRP18" "U5 snRNA-associated protein" 40,10,0,0 "PRP18" "U5 snRNA-associated protein" ytycr003w - 40,16,0,0 "MRPL32" "ribosomal protein YmL32, mitochondrial" 5,1,0,0 "MRPL32" "ribosomal protein YmL32, mitochondrial" ytyjl209w - 4,5,5,0 "CBP1" "apo-cytochrome b pre-mRNA processing protein" 40,16,0,0 "CBP1" "apo-cytochrome b pre-mRNA processing protein" ytyhr058c 4,5,1,4 "MED6" "RNA polymerase II transcriptional regulation mediator" 40,10,0,0 "MED6" "RNA polymerase II transcriptional regulation mediator" ytymr018w - 6,4,0,0 "null" "similarity to tetratricopeptide-repeat protein PAS10" ytyir015w 4,3,3,0 "RPR2" "RNase P subunit" 40,10,0,0 "RPR2" "RNase P subunit" ytyhr152w - 14,4,3,5 "SPO12" "sporulation protein" 3,3,2,0 "SPO12" "sporulation protein" ytykl101w 14,4,3,1 "HSL1" "ser/thr protein kinase, coupling septin ring assembly to cell cycle progression" 3,3,1,0 "HSL1" "ser/thr protein kinase, coupling septin ring assembly to cell cycle progression" 40,10,0,0 "HSL1" "ser/thr protein kinase, coupling septin ring assembly to cell cycle progression" ytylr170c - 40,9,0,0 "APS1" "AP-1 complex subunit, sigma1 subunit, 18 KD" 6,10,0,0 "APS1" "AP-1 complex subunit, sigma1 subunit, 18 KD" 8,19,0,0 "APS1" "AP-1 complex subunit, sigma1 subunit, 18 KD" ytykr104w - 11,7,0,0 "null" "similarity to multidrug resistance proteins" 67,50,25,0 "null" "similarity to multidrug resistance proteins" ytygl192w 14,4,3,5 "IME4" "positive transcription factor for IME2" 4,5,1,4 "IME4" "positive transcription factor for IME2" 40,10,0,0 "IME4" "positive transcription factor for IME2" ytykl022c 3,3,1,0 "CDC16" "subunit of anaphase-promoting complex (cyclosome)" 40,10,0,0 "CDC16" "subunit of anaphase-promoting complex (cyclosome)" 40,4,0,0 "CDC16" "subunit of anaphase-promoting complex (cyclosome)" 6,13,1,0 "CDC16" "subunit of anaphase-promoting complex (cyclosome)" 6,7,0,0 "CDC16" "subunit of anaphase-promoting complex (cyclosome)" ytyfl061w - 1,2,1,0 "null" "similarity to M.verrucaria cyanamide hydratase" ytykr105c - 11,7,0,0 "null" "strong similarity to SGE1P and hypothetical protein YCL069w" 67,28,0,0 "null" "strong similarity to SGE1P and hypothetical protein YCL069w" ytygr276c - 1,3,16,0 "RNH70" "ribonuclease H" ytylr090w - 6,1,0,0 "XDJ1" "similarity to E.coli dnaJ" ytydr150w - 3,3,1,0 "NUM1" "nuclear migration protein" ytyml111w - 6,13,1,0 "BUL2" "strong similarity to ubiquitination protein BUL1P" 6,7,0,0 "BUL2" "strong similarity to ubiquitination protein BUL1P" ytydr217c 3,1,5,0 "RAD9" "DNA repair checkpoint protein" 3,3,1,3 "RAD9" "DNA repair checkpoint protein" 4,5,1,4 "RAD9" "DNA repair checkpoint protein" 40,10,0,0 "RAD9" "DNA repair checkpoint protein" ytyml032c 14,4,3,3 "RAD52" "recombination and DNA repair protein" 3,1,5,1 "RAD52" "recombination and DNA repair protein" 40,10,0,0 "RAD52" "recombination and DNA repair protein" ytyir032c - 1,2,1,0 "DAL3" "ureidoglycolate hydrolase" 1,3,1,0 "DAL3" "ureidoglycolate hydrolase" ytypr095c - 8,7,0,0 "SYT1" "guanine nucleotide exchange factor, contains a conserved SEC7P-domain" ytyjl146w - 10,1,99,0 "IDS2" "IME2-dependent signaling protein" 14,4,3,5 "IDS2" "IME2-dependent signaling protein" 3,3,2,0 "IDS2" "IME2-dependent signaling protein" ytyjr149w - 1,2,1,0 "null" "similarity to 2-nitropropane dioxygenase" ytypr175w 3,1,3,0 "DPB2" "DNA-directed DNA polymerase epsilon, subunit B" 40,10,0,0 "DPB2" "DNA-directed DNA polymerase epsilon, subunit B" ytylr092w - 1,1,1,0 "SUL2" "sulfate transporter" 13,1,3,1 "SUL2" "sulfate transporter" 67,4,7,0 "SUL2" "sulfate transporter" ytybl061c - 1,5,4,0 "SKT5" "protoplast regeneration and killer toxin resistance protein" 30,1,0,0 "SKT5" "protoplast regeneration and killer toxin resistance protein" ytygr292w - 1,5,1,0 "MAL12" "alpha-glucosidase of the MAL1 locus" 40,3,0,0 "MAL12" "alpha-glucosidase of the MAL1 locus" ytycl004w - 1,6,1,0 "PGS1" "phosphatidylglycerophosphate synthase" 3,3,1,0 "PGS1" "phosphatidylglycerophosphate synthase" 30,1,0,0 "PGS1" "phosphatidylglycerophosphate synthase" 30,16,0,0 "PGS1" "phosphatidylglycerophosphate synthase" 40,16,0,0 "PGS1" "phosphatidylglycerophosphate synthase" ytyol028c 4,5,1,4 "YAP7" "involved in transcription activation" 40,10,0,0 "YAP7" "involved in transcription activation" ytydl150w 4,1,1,0 "RPC53" "DNA-directed RNA polymerase III, 47 KD subunit" 4,3,1,0 "RPC53" "DNA-directed RNA polymerase III, 47 KD subunit" 40,10,0,0 "RPC53" "DNA-directed RNA polymerase III, 47 KD subunit" ytydl070w - 4,5,1,4 "BDF2" "similarity to bromodomain protein BDF1P" ytyer111c 3,3,1,0 "SWI4" "transcription factor" 4,5,1,4 "SWI4" "transcription factor" 40,10,0,0 "SWI4" "transcription factor" ytykr028w - 14,4,3,1 "SAP190" "SIT4P-associated protein" 3,3,1,0 "SAP190" "SIT4P-associated protein" ytyml035c - 1,3,1,0 "AMD1" "AMP deaminase" 2,99,0,0 "AMD1" "AMP deaminase" ytyhr157w 3,1,5,0 "REC104" "meiosis-specific protein" 3,3,2,0 "REC104" "meiosis-specific protein" 40,10,0,0 "REC104" "meiosis-specific protein" ytygr040w 13,11,3,7 "KSS1" "ser/thr protein kinase of the MAP kinase family" 14,4,3,3 "KSS1" "ser/thr protein kinase of the MAP kinase family" 40,10,0,0 "KSS1" "ser/thr protein kinase of the MAP kinase family" ytyer018c - 40,5,0,0 "SPC25" "spindle pole body protein" ytyhr158c - 13,11,3,7 "KEL1" "involved in cell fusion and morphology" 14,4,3,1 "KEL1" "involved in cell fusion and morphology" 14,4,3,3 "KEL1" "involved in cell fusion and morphology" 40,3,0,0 "KEL1" "involved in cell fusion and morphology" ytymr039c 4,5,1,4 "SUB1" "transcriptional coactivator" 40,10,0,0 "SUB1" "transcriptional coactivator" ytylr336c - 13,11,3,13 "SGD1" "involved in HOG pathway" ytydl138w - 1,5,7,0 "RGT2" "suppressor of SNF3 mutant" 30,1,0,0 "RGT2" "suppressor of SNF3 mutant" 67,7,0,0 "RGT2" "suppressor of SNF3 mutant" ytylr430w 4,3,3,0 "SEN1" "positive effector of tRNA-splicing endonuclease" 40,10,0,0 "SEN1" "positive effector of tRNA-splicing endonuclease" ytyhr079c - 1,6,10,0 "IRE1" "protein kinase" 10,1,99,0 "IRE1" "protein kinase" 11,1,0,0 "IRE1" "protein kinase" 40,7,0,0 "IRE1" "protein kinase" ytygl025c 3,1,5,0 "PGD1" "mediator complex subunit" 4,5,1,4 "PGD1" "mediator complex subunit" 40,10,0,0 "PGD1" "mediator complex subunit" ytykl042w - 3,3,1,0 "SPC42" "spindle pole body component" 40,5,0,0 "SPC42" "spindle pole body component" ytycr105w - 1,5,1,0 "null" "strong similarity to alcohol dehydrogenases" 2,16,0,0 "null" "strong similarity to alcohol dehydrogenases" ytymr214w - 40,7,0,0 "SCJ1" "homolog of E. coli DnaJ, functions in the endoplasmic reticulum by interaction with KAR2P" 6,4,0,0 "SCJ1" "homolog of E. coli DnaJ, functions in the endoplasmic reticulum by interaction with KAR2P" ytylr417w - 6,4,0,0 "VPS36" "defective in vacuolar protein sorting" ytybl080c - 40,16,0,0 "PET112" "required to maintain rho+ mitochondrial DNA" 5,99,0,0 "PET112" "required to maintain rho+ mitochondrial DNA" ytydl154w 3,3,2,0 "MSH5" "meiosis-specific protein" 40,10,0,0 "MSH5" "meiosis-specific protein" ytydr237w - 40,16,0,0 "MRPL7" "ribosomal protein of the large subunit, mitochondrial" 5,1,0,0 "MRPL7" "ribosomal protein of the large subunit, mitochondrial" ytylr098c 1,1,4,0 "CHA4" "transcription factor" 4,5,1,4 "CHA4" "transcription factor" 40,10,0,0 "CHA4" "transcription factor" ytyal015c - 11,1,0,0 "NTG1" "DNA repair protein" 3,1,5,1 "NTG1" "DNA repair protein" ytygl201c 3,1,3,0 "MCM6" "involved in replication" 40,10,0,0 "MCM6" "involved in replication" ytycr106w 4,5,1,4 "null" "similarity to transcription factor" 40,10,0,0 "null" "similarity to transcription factor" ytyol141w - 6,7,0,0 "PPM2" "similarity to YDR435c and C.elegans hypothetical protein" ytylr433c - 13,1,1,99 "CNA1" "calcineurin B, catalytic subunit" 14,1,0,0 "CNA1" "calcineurin B, catalytic subunit" 14,4,3,3 "CNA1" "calcineurin B, catalytic subunit" 4,5,1,4 "CNA1" "calcineurin B, catalytic subunit" 40,3,0,0 "CNA1" "calcineurin B, catalytic subunit" ytykr061w - 1,5,1,0 "KTR2" "mannosyltransferase" 40,8,0,0 "KTR2" "mannosyltransferase" ytyer116c - 4,99,0,0 "SLX8" "subunit of HEX3P-SLX8P complex, required for cell growth in the absence of SGS1 or TOP3" ytyel019c - 3,1,5,1 "MMS21" "DNA repair protein" ytymr070w - 4,5,1,4 "MOT3" "high-copy suppressor of MOT1-SPT3 synthetic lethality" ytycr107w - 1,5,1,0 "AAD3" "strong similarity aryl-alcohol reductases of P. chrysosporium" 2,16,0,0 "AAD3" "strong similarity aryl-alcohol reductases of P. chrysosporium" ytyil130w - 4,5,1,4 "null" "similarity to PUT3P and to hypothetical protein YJL206c" ytyar019c - 3,3,1,0 "CDC15" "protein kinase of the MAP kinase kinase kinase family" ytypl193w - 5,1,0,0 "RSA1" "nucleoplasmic protein involved in assembly of 60S ribosomal subunits" ytypr196w 4,5,1,4 "null" "strong similarity to regulatory protein Mal63p" 40,10,0,0 "null" "strong similarity to regulatory protein Mal63p" ytycr028c - 1,1,4,0 "FEN2" "high affinity H+/pantothenate symporter" 1,2,4,0 "FEN2" "high affinity H+/pantothenate symporter" 1,5,4,0 "FEN2" "high affinity H+/pantothenate symporter" 1,6,10,0 "FEN2" "high affinity H+/pantothenate symporter" 67,19,0,0 "FEN2" "high affinity H+/pantothenate symporter" Training Accuracy: 127/381 (33.33%) Training Frequency class '40/10/0/0': 329/1638 (20.09%) Evaluation on validation data (851 items): ytykl045w 3,1,3,0 "PRI2" "DNA-directed DNA polymerase alpha , 58 KD subunit (DNA primase)" 40,10,0,0 "PRI2" "DNA-directed DNA polymerase alpha , 58 KD subunit (DNA primase)" ytykl038w 1,5,4,0 "RGT1" "regulator of glucose-induced genes" 4,5,1,4 "RGT1" "regulator of glucose-induced genes" 40,10,0,0 "RGT1" "regulator of glucose-induced genes" ytyal024c - 3,3,1,0 "LTE1" "GDP/GTP exchange factor" ytyjl095w - 11,1,0,0 "BCK1" "ser/thr protein kinase of the MEKK family" 14,1,3,0 "BCK1" "ser/thr protein kinase of the MEKK family" 14,4,3,1 "BCK1" "ser/thr protein kinase of the MEKK family" 3,3,1,0 "BCK1" "ser/thr protein kinase of the MEKK family" 40,3,0,0 "BCK1" "ser/thr protein kinase of the MEKK family" ytykr063c 14,4,3,1 "LAS1" "involved in cell morphogenesis, cytoskeletal regulation and bud formation" 3,3,1,0 "LAS1" "involved in cell morphogenesis, cytoskeletal regulation and bud formation" 40,10,0,0 "LAS1" "involved in cell morphogenesis, cytoskeletal regulation and bud formation" ytymr064w - 4,99,0,0 "AEP1" "nuclear control of ATPase messenger RNA expression protein" 5,7,0,0 "AEP1" "nuclear control of ATPase messenger RNA expression protein" ytylr274w 3,1,3,0 "CDC46" "cell division control protein" 3,3,1,0 "CDC46" "cell division control protein" 40,10,0,0 "CDC46" "cell division control protein" ytyjl176c 1,5,4,0 "SWI3" "transcription regulatory protein" 14,4,3,3 "SWI3" "transcription regulatory protein" 4,5,1,4 "SWI3" "transcription regulatory protein" 40,10,0,0 "SWI3" "transcription regulatory protein" ytypr104c 4,5,1,4 "FHL1" "transcriptional activator of the forkhead/hnf3 family" 40,10,0,0 "FHL1" "transcriptional activator of the forkhead/hnf3 family" ytyjl096w - 40,16,0,0 "MRPL49" "ribosomal protein YmL49, mitochondrial" 5,1,0,0 "MRPL49" "ribosomal protein YmL49, mitochondrial" ytyfr002w 40,10,0,0 "NIC96" "nuclear pore protein" 8,1,0,0 "NIC96" "nuclear pore protein" ytymr065w - 14,4,3,3 "KAR5" "nuclear fusion protein" 40,5,0,0 "KAR5" "nuclear fusion protein" 40,7,0,0 "KAR5" "nuclear fusion protein" ytylr102c - 3,3,1,0 "APC9" "subunit of the Anaphase Promoting Complex" 6,13,1,0 "APC9" "subunit of the Anaphase Promoting Complex" 6,7,0,0 "APC9" "subunit of the Anaphase Promoting Complex" ytybr167c 4,1,4,0 "POP7" "nuclear RNase P subunit" 4,3,3,0 "POP7" "nuclear RNase P subunit" 40,10,0,0 "POP7" "nuclear RNase P subunit" ytypr032w - 14,4,3,1 "SRO7" "polarized exocytosis by regulating SNARE function" 30,4,0,0 "SRO7" "polarized exocytosis by regulating SNARE function" 40,3,0,0 "SRO7" "polarized exocytosis by regulating SNARE function" 8,16,0,0 "SRO7" "polarized exocytosis by regulating SNARE function" ytyll012w - 1,6,4,0 "null" "similarity to triacylglycerol lipases" ytypr018w 3,1,3,0 "RLF2" "chromatin assembly complex, subunit p90" 3,1,9,5 "RLF2" "chromatin assembly complex, subunit p90" 40,10,3,0 "RLF2" "chromatin assembly complex, subunit p90" 6,10,0,0 "RLF2" "chromatin assembly complex, subunit p90" ytycr045c - 6,13,0,0 "null" "similarity to serin proteases" ytydr270w - 13,1,1,1 "CCC2" "probable copper-transporting ATPase" 40,8,0,0 "CCC2" "probable copper-transporting ATPase" 67,4,1,1 "CCC2" "probable copper-transporting ATPase" 67,50,22,0 "CCC2" "probable copper-transporting ATPase" ytygl212w - 30,25,0,0 "VAM7" "vacuolar morphogenesis protein" 40,25,0,0 "VAM7" "vacuolar morphogenesis protein" 40,3,0,0 "VAM7" "vacuolar morphogenesis protein" 8,13,0,0 "VAM7" "vacuolar morphogenesis protein" ytylr103c 3,1,3,0 "CDC45" "required for minichromosome maintenance and initiation of chromosomal DNA replication" 3,3,1,0 "CDC45" "required for minichromosome maintenance and initiation of chromosomal DNA replication" 40,10,0,0 "CDC45" "required for minichromosome maintenance and initiation of chromosomal DNA replication" ytygl205w - 1,6,4,0 "POX1" "acyl-CoA oxidase" 2,25,0,0 "POX1" "acyl-CoA oxidase" 40,19,0,0 "POX1" "acyl-CoA oxidase" ytyor156c - 14,4,3,1 "NFI1" "interacts with CDC12P in 2-hybrid assay" 3,3,1,0 "NFI1" "interacts with CDC12P in 2-hybrid assay" 3,3,3,0 "NFI1" "interacts with CDC12P in 2-hybrid assay" 40,4,0,0 "NFI1" "interacts with CDC12P in 2-hybrid assay" ytydr257c 4,5,1,4 "RMS1" "regulatory protein" 40,10,0,0 "RMS1" "regulatory protein" ytykl070w - 4,5,1,4 "null" "similarity to B.subtilis transcriptional regulatory protein" ytydl247w - 1,5,7,0 "null" "strong similarity to sugar transport proteins" 67,7,0,0 "null" "strong similarity to sugar transport proteins" ytybl086c - 1,5,99,0 "null" "weak similarity to S. pombe hypothetical protein" ytynl102w 3,1,3,0 "POL1" "DNA-directed DNA polymerase alpha, 180 KD subunit" 40,10,0,0 "POL1" "DNA-directed DNA polymerase alpha, 180 KD subunit" ytyol161c - 11,1,0,0 "null" "strong similarity to members of the SRP1P/TIP1P family" ytyjl179w - 6,1,0,0 "PFD1" "Prefoldin subunit 1" ytymr228w - 3,1,5,0 "MTF1" "RNA polymerase specific factor, mitochondrial" 4,5,1,1 "MTF1" "RNA polymerase specific factor, mitochondrial" 40,16,0,0 "MTF1" "RNA polymerase specific factor, mitochondrial" ytyjl013c 3,3,1,3 "MAD3" "spindle-assembly checkpoint protein" 40,10,0,0 "MAD3" "spindle-assembly checkpoint protein" ytyil143c 3,1,5,1 "SSL2" "DNA helicase" 4,5,1,1 "SSL2" "DNA helicase" 40,10,0,0 "SSL2" "DNA helicase" ytyor077w - 3,1,5,0 "RTS2" "similarity to mouse KIN17 protein" ytykl217w - 1,5,7,0 "JEN1" "carboxylic acid transporter protein" 67,7,0,0 "JEN1" "carboxylic acid transporter protein" ytykl218c - 1,1,10,0 "SRY1" "strong similarity to E.coli and H.influenzae threonine dehydratases" ytybr097w - 40,8,0,0 "VPS15" "ser/thr protein kinase" 40,9,0,0 "VPS15" "ser/thr protein kinase" 6,4,0,0 "VPS15" "ser/thr protein kinase" 8,13,0,0 "VPS15" "ser/thr protein kinase" 8,7,0,0 "VPS15" "ser/thr protein kinase" ytyll015w - 11,7,0,0 "BPT1" "similarity to YCF1P, YOR1P, rat organic anion transporter" 67,50,25,0 "BPT1" "similarity to YCF1P, YOR1P, rat organic anion transporter" ytymr164c - 4,99,0,0 "MSS11" "activator of STA1, STA2, and STA3" ytykl072w - 4,5,1,4 "STB6" "SIN3 binding protein" ytydr419w - 3,1,5,1 "RAD30" "DNA repair protein" ytybl088c - 1,6,1,0 "TEL1" "telomere length control protein" 3,3,1,3 "TEL1" "telomere length control protein" 30,10,3,0 "TEL1" "telomere length control protein" ytyll016w - 1,5,4,0 "SDC25" "GDP/GTP exchange factor (GEF)" 13,11,3,1 "SDC25" "GDP/GTP exchange factor (GEF)" 3,3,1,0 "SDC25" "GDP/GTP exchange factor (GEF)" 40,2,0,0 "SDC25" "GDP/GTP exchange factor (GEF)" 62,2,5,0 "SDC25" "GDP/GTP exchange factor (GEF)" ytymr165c - 14,1,0,0 "SMP2" "involved in plasmid maintenance, respiration and cell proliferation" 2,13,0,0 "SMP2" "involved in plasmid maintenance, respiration and cell proliferation" 30,1,0,0 "SMP2" "involved in plasmid maintenance, respiration and cell proliferation" ytydl003w 3,3,1,0 "MCD1" "Mitotic Chromosome Determinant" 40,10,0,0 "MCD1" "Mitotic Chromosome Determinant" ytyol157c - 1,5,1,0 "null" "strong similarity to alpha-glucosidases" 2,19,0,0 "null" "strong similarity to alpha-glucosidases" ytykr084c - 40,3,0,0 "HBS1" "translation elongation factor eEF-1 alpha chain homolog" 5,4,0,0 "HBS1" "translation elongation factor eEF-1 alpha chain homolog" ytydr021w 4,1,4,0 "FAL1" "involved in maturation of 18S rRNA" 40,10,0,0 "FAL1" "involved in maturation of 18S rRNA" ytydr195w 4,5,5,0 "REF2" "RNA 3'-end formation protein" 40,10,0,0 "REF2" "RNA 3'-end formation protein" ytycl054w 4,5,1,4 "SPB1" "required for ribosome synthesis, putative methylase" 40,10,0,0 "SPB1" "required for ribosome synthesis, putative methylase" 5,99,0,0 "SPB1" "required for ribosome synthesis, putative methylase" ytyjl024c - 8,19,0,0 "APS3" "AP-3 complex subunit, sigma3 subunit, 22 KD" ytylr115w 4,5,5,0 "CFT2" "cleavage and polyadenylation specificity factor, part of CF II" 40,10,0,0 "CFT2" "cleavage and polyadenylation specificity factor, part of CF II" ytylr377c - 1,5,1,0 "FBP1" "fructose-1,6-bisphosphatase" 2,1,0,0 "FBP1" "fructose-1,6-bisphosphatase" 40,3,0,0 "FBP1" "fructose-1,6-bisphosphatase" ytyml077w - 40,8,0,0 "BET5" "involved in targeting and fusion of ER to golgi transport vesicles" 8,7,0,0 "BET5" "involved in targeting and fusion of ER to golgi transport vesicles" ytybr021w - 1,3,4,0 "FUR4" "uracil permease" 40,2,0,0 "FUR4" "uracil permease" 67,16,0,0 "FUR4" "uracil permease" 8,19,0,0 "FUR4" "uracil permease" ytyhr120w - 3,1,5,0 "MSH1" "DNA mismatch repair protein, mitochondrial" 40,16,0,0 "MSH1" "DNA mismatch repair protein, mitochondrial" ytylr116w 4,5,5,1 "MSL5" "branch point bridging protein" 40,10,0,0 "MSL5" "branch point bridging protein" ytygl240w - 3,3,1,0 "DOC1" "component of the anaphase promoting complex" 6,13,1,0 "DOC1" "component of the anaphase promoting complex" 6,7,0,0 "DOC1" "component of the anaphase promoting complex" ytykr086w 4,5,5,1 "PRP16" "RNA-dependent ATPase" 40,10,0,0 "PRP16" "RNA-dependent ATPase" ytynr045w - 40,16,0,0 "PET494" "translational activator, mitochondrial" 5,7,0,0 "PET494" "translational activator, mitochondrial" ytyfl008w 3,3,1,0 "SMC1" "chromosome segregation protein" 40,10,0,0 "SMC1" "chromosome segregation protein" 40,3,0,0 "SMC1" "chromosome segregation protein" ytymr270c 4,1,1,0 "RRN9" "RNA polymerase I specific transcription initiation factor" 40,10,0,0 "RRN9" "RNA polymerase I specific transcription initiation factor" ytymr190c - 14,10,0,0 "SGS1" "DNA helicase" 3,1,5,0 "SGS1" "DNA helicase" ytygl241w 30,10,0,0 "KAP114" "Member of the karyopherin-beta family, nuclear import" 40,10,0,0 "KAP114" "Member of the karyopherin-beta family, nuclear import" 6,4,0,0 "KAP114" "Member of the karyopherin-beta family, nuclear import" 8,1,0,0 "KAP114" "Member of the karyopherin-beta family, nuclear import" ytygr091w 4,5,5,1 "PRP31" "pre-mRNA splicing protein" 40,10,0,0 "PRP31" "pre-mRNA splicing protein" ytymr176w - 30,1,0,0 "ECM5" "involved in cell wall biogenesis and architecture" ytylr393w - 40,16,0,0 "ATP10" "F1F0 ATPase complex assembly protein" 6,10,0,0 "ATP10" "F1F0 ATPase complex assembly protein" ytyml087c - 2,13,0,0 "null" "strong similarity to YML125c, similarity to cytochrome-b5- and nitrate reductases" ytydr439w - 4,5,1,4 "LRS4" "involved in rDNA silencing" ytyhr210c - 1,5,1,0 "null" "strong similarity to UDP-glucose-4-epimerase" 40,3,0,0 "null" "strong similarity to UDP-glucose-4-epimerase" ytypl119c 4,5,5,1 "DBP1" "ATP-dependent RNA helicase" 40,10,0,0 "DBP1" "ATP-dependent RNA helicase" ytybr017c - 40,3,0,0 "KAP104" "beta-karyopherin" 8,1,0,0 "KAP104" "beta-karyopherin" ytylr394w - 3,1,5,0 "CST9" "protein required for synapsis, meiotic recombination, sporulation, proper chromosome segregation, and synaptonemal complex formation" ytyor100c - 8,4,0,0 "CRC1" "mitochondrial carnitine carrier, member of the mitochondrial carrier (MCF) family" ytydl104c - 6,99,0,0 "QRI7" "similarity to H.influenzae sialoglycoprotease (gcp)" ytydr034c 1,1,4,0 "LYS14" "transcriptional activator of lysine pathway genes" 4,5,1,4 "LYS14" "transcriptional activator of lysine pathway genes" 40,10,0,0 "LYS14" "transcriptional activator of lysine pathway genes" ytyml088w - 6,13,1,0 "UFO1" "involved in degradation of HO protein" ytylr141w 4,1,1,0 "RRN5" "RNA polymerase I specific transcription initiation factor" 40,10,0,0 "RRN5" "RNA polymerase I specific transcription initiation factor" ytybl008w 4,5,1,4 "HIR1" "histone transcription regulator" 40,10,0,0 "HIR1" "histone transcription regulator" ytydr448w 4,5,1,4 "ADA2" "general transcriptional adaptor or co-activator" 40,10,0,0 "ADA2" "general transcriptional adaptor or co-activator" ytyhr117w - 40,16,0,0 "TOM71" "protein with similarity to TOM70P/Mas70p" 8,4,0,0 "TOM71" "protein with similarity to TOM70P/Mas70p" ytydl031w - 4,99,0,0 "DBP10" "putative RNA helicase involved in ribosome biogenesis" ytyal058w - 40,7,0,0 "CNE1" "calnexin, involved in regulation of secretion" ytyll052c - 67,1,1,0 "AQY2" "strong similarity to AQY1" ytynr070w - 11,7,0,0 "null" "strong similarity to SNQ2P" 67,50,25,0 "null" "strong similarity to SNQ2P" ytydl017w 3,1,3,0 "CDC7" "protein kinase" 3,3,1,0 "CDC7" "protein kinase" 3,3,2,0 "CDC7" "protein kinase" 40,10,0,0 "CDC7" "protein kinase" ytyjl050w 4,7,0,0 "MTR4" "involved in nucleocytoplasmic transport of mRNA" 40,10,0,0 "MTR4" "involved in nucleocytoplasmic transport of mRNA" 8,1,0,0 "MTR4" "involved in nucleocytoplasmic transport of mRNA" ytyfl040w - 1,5,7,0 "null" "similarity to yeast glucose transport proteins" 67,7,0,0 "null" "similarity to yeast glucose transport proteins" ytyjr047c - 40,3,0,0 "ANB1" "translation initiation factor eIF5A.2" 5,4,0,0 "ANB1" "translation initiation factor eIF5A.2" ytylr070c - 1,5,1,0 "null" "strong similarity to sugar dehydrogenases" ytylr136c - 4,3,6,0 "TIS11" "tRNA-specific adenosine deaminase 3" ytykl176c - 6,4,0,0 "LST4" "protein required for regulated transport of nitrogen-regulated permeases from the Golgi to the plasma membrane" ytybr295w - 13,1,1,1 "PCA1" "P-type Cu2+-transporting ATPase" 67,4,1,1 "PCA1" "P-type Cu2+-transporting ATPase" 67,50,22,0 "PCA1" "P-type Cu2+-transporting ATPase" ytymr101c - 30,1,0,0 "SRT1" "cis-prenyltransferase homologue" 6,7,0,0 "SRT1" "cis-prenyltransferase homologue" ytymr021c 11,1,0,0 "MAC1" "metal binding activator" 4,5,1,4 "MAC1" "metal binding activator" 40,10,0,0 "MAC1" "metal binding activator" ytyhl043w - 30,1,0,0 "ECM34" "involved in cell wall biogenesis and architecture" ytypl217c - 4,1,4,0 "BMS1" "GTP-binding protein, required for distinct steps of 40S ribosome biogenesis" ytyjr055w - 11,1,0,0 "HIT1" "required for growth at high temperature" ytydl114w - 3,3,2,0 "null" "weak similarity to Rhizobium nodulation protein nodG" ytygr271w - 11,7,0,0 "SLH1" "strong similarity to S.pombe RNA helicase" ytylr399c 14,4,3,5 "BDF1" "sporulation protein" 4,5,1,4 "BDF1" "sporulation protein" 40,10,0,0 "BDF1" "sporulation protein" ytydr052c 3,1,3,0 "DBF4" "regulatory subunit for CDC7P protein kinase" 3,3,1,0 "DBF4" "regulatory subunit for CDC7P protein kinase" 40,10,0,0 "DBF4" "regulatory subunit for CDC7P protein kinase" ytyjl221c - 1,5,1,0 "FSP2" "strong similarity to alpha-D-glucosidase" 2,19,0,0 "FSP2" "strong similarity to alpha-D-glucosidase" ytydl028c - 3,3,1,0 "MPS1" "serine/threonine/tyrosine protein kinase" 3,3,2,0 "MPS1" "serine/threonine/tyrosine protein kinase" ytyjr137c - 1,1,1,0 "ECM17" "involved in cell wall biogenesis and architecture" 1,2,1,0 "ECM17" "involved in cell wall biogenesis and architecture" 30,1,0,0 "ECM17" "involved in cell wall biogenesis and architecture" ytymr023c - 4,5,5,1 "MSS1" "mitochondrial GTPase involved in expression of COX1" 40,16,0,0 "MSS1" "mitochondrial GTPase involved in expression of COX1" 5,4,0,0 "MSS1" "mitochondrial GTPase involved in expression of COX1" 5,7,0,0 "MSS1" "mitochondrial GTPase involved in expression of COX1" ytylr138w - 13,1,1,3 "NHA1" "putative Na+/H+ antiporter" 13,1,1,99 "NHA1" "putative Na+/H+ antiporter" 67,4,1,2 "NHA1" "putative Na+/H+ antiporter" ytynl225c - 14,4,3,5 "CNM67" "involved in cytokinesis" 3,3,1,0 "CNM67" "involved in cytokinesis" 3,3,3,0 "CNM67" "involved in cytokinesis" 40,5,0,0 "CNM67" "involved in cytokinesis" ytymr277w 4,5,1,0 "FCP1" "TFIIF interacting component of CTD phosphatase" 40,10,0,0 "FCP1" "TFIIF interacting component of CTD phosphatase" ytydl036c - 1,7,1,0 "null" "strong similarity to RIB2 protein" ytypl241c - 3,3,1,0 "CIN2" "involved in chromosome segregation" 40,4,0,0 "CIN2" "involved in chromosome segregation" ytylr321c 3,1,9,5 "SFH1" "subunit of the RSC complex" 3,3,1,0 "SFH1" "subunit of the RSC complex" 30,10,3,0 "SFH1" "subunit of the RSC complex" 4,5,1,4 "SFH1" "subunit of the RSC complex" 40,10,0,0 "SFH1" "subunit of the RSC complex" ytykr102w - 40,1,0,0 "FLO10" "similarity to FLO1P" 40,27,0,0 "FLO10" "similarity to FLO1P" ytybr045c - 14,4,3,5 "GIP1" "GLC7-interacting protein" 3,3,2,0 "GIP1" "GLC7-interacting protein" 4,5,1,4 "GIP1" "GLC7-interacting protein" ytydl116w 14,4,3,5 "NUP84" "nuclear pore protein" 40,10,0,0 "NUP84" "nuclear pore protein" 8,1,0,0 "NUP84" "nuclear pore protein" ytyjr138w - 3,99,0,0 "IML1" "similarity to C.elegans hypothetical protein T08A11.1" 30,10,0,0 "IML1" "similarity to C.elegans hypothetical protein T08A11.1" ytydr054c 1,1,4,0 "CDC34" "E2 ubiquitin-conjugating enzyme" 1,5,4,0 "CDC34" "E2 ubiquitin-conjugating enzyme" 3,1,3,0 "CDC34" "E2 ubiquitin-conjugating enzyme" 3,3,1,0 "CDC34" "E2 ubiquitin-conjugating enzyme" 40,10,0,0 "CDC34" "E2 ubiquitin-conjugating enzyme" 6,13,1,0 "CDC34" "E2 ubiquitin-conjugating enzyme" 6,7,0,0 "CDC34" "E2 ubiquitin-conjugating enzyme" ytycr089w - 14,4,3,3 "FIG2" "required for efficient mating" 40,1,0,0 "FIG2" "required for efficient mating" ytyor381w - 13,1,1,1 "FRE3" "strong similarity to ferric reductase FRE2P" ytyjl216c - 1,5,1,0 "null" "strong similarity to Mal62p" 2,19,0,0 "null" "strong similarity to Mal62p" ytyjl129c - 13,1,1,99 "TRK1" "potassium transport protein TRK1P, high-affinity" 40,2,0,0 "TRK1" "potassium transport protein TRK1P, high-affinity" 67,4,1,2 "TRK1" "potassium transport protein TRK1P, high-affinity" 8,19,0,0 "TRK1" "potassium transport protein TRK1P, high-affinity" ytynl233w - 14,4,3,1 "BNI4" "bud neck involved" 40,4,0,0 "BNI4" "bud neck involved" 6,10,0,0 "BNI4" "bud neck involved" ytyml103c 40,10,0,0 "NUP188" "nuclear pore protein" 8,1,0,0 "NUP188" "nuclear pore protein" ytyor295w - 4,1,0,0 "UAF30" "subunit of RNA polymerase I transcription factor" ytyor368w - 3,1,5,1 "RAD17" "DNA damage checkpoint control protein" 3,3,1,3 "RAD17" "DNA damage checkpoint control protein" 3,3,2,0 "RAD17" "DNA damage checkpoint control protein" ytypl083c 4,3,3,0 "SEN54" "tRNA splicing endonuclease alpha subunit" 40,10,0,0 "SEN54" "tRNA splicing endonuclease alpha subunit" ytylr316c - 4,3,6,0 "TAD3" "subunit of tRNA-specific adenosine-34 deaminase" ytyfl047w - 14,1,3,0 "RGD2" "GTPase activating protein" 62,2,5,0 "RGD2" "GTPase activating protein" ytyir023w 1,1,4,0 "DAL81" "transcriptional activator for allantoin and GABA catabolic genes" 1,2,4,0 "DAL81" "transcriptional activator for allantoin and GABA catabolic genes" 1,3,13,0 "DAL81" "transcriptional activator for allantoin and GABA catabolic genes" 4,5,1,4 "DAL81" "transcriptional activator for allantoin and GABA catabolic genes" 40,10,0,0 "DAL81" "transcriptional activator for allantoin and GABA catabolic genes" ytyer013w 4,5,5,1 "PRP22" "pre-mRNA splicing factor" 40,10,0,0 "PRP22" "pre-mRNA splicing factor" ytyir031c - 1,3,1,0 "DAL7" "malate synthase 2" 1,5,1,0 "DAL7" "malate synthase 2" 2,99,0,0 "DAL7" "malate synthase 2" 40,19,0,0 "DAL7" "malate synthase 2" ytyer101c - 6,4,0,0 "AST2" "involved in targeting of plasma membrane [H+]ATPase" ytybr055c 4,5,5,1 "PRP6" "snRNP(U4/U6)-associated splicing factor" 40,10,0,0 "PRP6" "snRNP(U4/U6)-associated splicing factor" ytynl082w 3,1,5,0 "PMS1" "DNA mismatch repair protein" 40,10,0,0 "PMS1" "DNA mismatch repair protein" ytylr411w - 13,1,1,1 "CTR3" "copper transport protein" 67,4,1,1 "CTR3" "copper transport protein" ytymr288w - 4,5,5,1 "HSH155" "component of a multiprotein splicing factor" ytyml017w - 4,99,0,0 "PSP2" "suppressor of DNA polymerase alpha mutation" ytyor384w - 13,1,1,1 "FRE5" "strong similarity to ferric reductase FRE2P" ytyfl056c - 1,5,1,0 "AAD6" "strong similarity to aryl-alcohol dehydrogenases" 2,16,0,0 "AAD6" "strong similarity to aryl-alcohol dehydrogenases" ytylr245c - 1,3,4,0 "CDD1" "cytidine deaminase" ytykl198c - 13,11,3,1 "PTK1" "polyamine transport enhancing protein" 8,99,0,0 "PTK1" "polyamine transport enhancing protein" ytyer015w - 1,6,13,0 "FAA2" "long-chain-fatty-acid--CoA ligase" 1,6,7,0 "FAA2" "long-chain-fatty-acid--CoA ligase" 40,19,0,0 "FAA2" "long-chain-fatty-acid--CoA ligase" 8,10,0,0 "FAA2" "long-chain-fatty-acid--CoA ligase" ytyal002w - 6,4,0,0 "VPS8" "vacuolar sorting protein, 134 kD" 8,13,0,0 "VPS8" "vacuolar sorting protein, 134 kD" ytyor378w - 11,7,0,0 "null" "strong similarity to aminotriazole resistance protein" 67,28,0,0 "null" "strong similarity to aminotriazole resistance protein" ytymr036c - 3,3,1,0 "MIH1" "M-phase inducing protein tyrosine phosphatase" ytylr319c - 14,4,3,1 "BUD6" "bud site selection protein" 40,4,0,0 "BUD6" "bud site selection protein" ytykr027w - 1,5,1,0 "null" "strong similarity to CHS6P" ytynl318c - 1,5,7,0 "HXT14" "hexose transport protein" 40,2,0,0 "HXT14" "hexose transport protein" 67,7,0,0 "HXT14" "hexose transport protein" 8,19,0,0 "HXT14" "hexose transport protein" ytymr109w - 14,4,3,1 "MYO5" "myosin I" 40,4,0,0 "MYO5" "myosin I" 8,22,0,0 "MYO5" "myosin I" ytypl174c - 3,3,1,0 "NIP100" "component of the dynactin complex" 40,4,0,0 "NIP100" "component of the dynactin complex" 40,5,0,0 "NIP100" "component of the dynactin complex" 8,22,0,0 "NIP100" "component of the dynactin complex" ytypl167c 3,1,3,0 "REV3" "DNA-directed DNA polymerase zeta subunit" 3,1,5,1 "REV3" "DNA-directed DNA polymerase zeta subunit" 40,10,0,0 "REV3" "DNA-directed DNA polymerase zeta subunit" ytydl056w 3,3,1,0 "MBP1" "transcription factor, subunit of the MBF factor" 4,5,1,4 "MBP1" "transcription factor, subunit of the MBF factor" 40,10,0,0 "MBP1" "transcription factor, subunit of the MBF factor" ytyhr164c 3,1,3,0 "DNA2" "DNA helicase" 40,10,0,0 "DNA2" "DNA helicase" ytyjl156c - 13,11,3,1 "SSY5" "part of an extracellular amino acid sensor" ytyjr093c 4,5,5,0 "FIP1" "component of pre-mRNA polyadenylation factor PF I" 40,10,0,0 "FIP1" "component of pre-mRNA polyadenylation factor PF I" ytymr125w 4,5,5,1 "STO1" "large subunit of the nuclear cap-binding protein complex CBC" 40,10,0,0 "STO1" "large subunit of the nuclear cap-binding protein complex CBC" ytypr192w - 67,1,1,0 "AQY1" "similarity to plasma membrane and water channel proteins" ytycl007c - 30,1,0,0 "CWH36" "affects the mannoprotein layer of the cell wall" ytyor127w - 14,4,3,1 "RGA1" "RHO-type GTPase-activating protein for CDC42P" 14,4,3,3 "RGA1" "RHO-type GTPase-activating protein for CDC42P" ytyal020c - 40,4,0,0 "ATS1" "alpha-tubulin suppressor" ytymr220w - 1,6,1,0 "ERG8" "phosphomevalonate kinase" 40,3,0,0 "ERG8" "phosphomevalonate kinase" ytydr243c 4,5,5,1 "PRP28" "pre-mRNA splicing factor RNA helicase of DEAD box family" 40,10,0,0 "PRP28" "pre-mRNA splicing factor RNA helicase of DEAD box family" ytycl014w - 14,4,3,1 "BUD3" "budding protein" 40,4,0,0 "BUD3" "budding protein" ytygr289c - 1,5,7,0 "MAL11" "general alpha-glucoside permease" 67,7,0,0 "MAL11" "general alpha-glucoside permease" ytypl096w - 6,13,1,0 "PNG1" "protein with de-N-glycosylation function" ytyel030w - 11,1,0,0 "ECM10" "heat shock protein of HSP70 family" 30,1,0,0 "ECM10" "heat shock protein of HSP70 family" 6,1,0,0 "ECM10" "heat shock protein of HSP70 family" ytyer040w 1,2,4,0 "GLN3" "transcription factor for positive nitrogen regulation" 4,5,1,4 "GLN3" "transcription factor for positive nitrogen regulation" 40,10,0,0 "GLN3" "transcription factor for positive nitrogen regulation" ytygl018c - 2,13,0,0 "JAC1" "molecular chaperone" 40,16,0,0 "JAC1" "molecular chaperone" 6,1,0,0 "JAC1" "molecular chaperone" ytylr329w 3,1,5,0 "REC102" "meiotic recombination protein" 3,3,2,0 "REC102" "meiotic recombination protein" 40,10,0,0 "REC102" "meiotic recombination protein" ytylr096w - 40,2,0,0 "KIN2" "ser/thr protein kinase" ytydr076w 14,4,3,3 "RAD55" "DNA repair protein" 3,1,5,1 "RAD55" "DNA repair protein" 3,3,2,0 "RAD55" "DNA repair protein" 40,10,0,0 "RAD55" "DNA repair protein" ytykl203c - 1,6,1,0 "TOR2" "phosphatidylinositol 3-kinase" 10,1,99,0 "TOR2" "phosphatidylinositol 3-kinase" 14,1,0,0 "TOR2" "phosphatidylinositol 3-kinase" 3,3,1,0 "TOR2" "phosphatidylinositol 3-kinase" 40,25,0,0 "TOR2" "phosphatidylinositol 3-kinase" ytynl270c - 1,1,7,0 "ALP1" "high-affinity permease for basic amino acids" 40,2,0,0 "ALP1" "high-affinity permease for basic amino acids" 67,10,0,0 "ALP1" "high-affinity permease for basic amino acids" 8,19,0,0 "ALP1" "high-affinity permease for basic amino acids" ytybl066c 14,4,3,5 "SEF1" "putative transcription factor" 4,5,1,4 "SEF1" "putative transcription factor" 40,10,0,0 "SEF1" "putative transcription factor" ytypr007c - 14,4,3,5 "SPO69" "protein required for meiosis and sporulation" 3,3,2,0 "SPO69" "protein required for meiosis and sporulation" ytygl033w 3,3,2,0 "HOP2" "required for pairing of homologous chromosomes" 40,10,3,0 "HOP2" "required for pairing of homologous chromosomes" ytygr116w 3,1,5,0 "SPT6" "transcription elongation protein" 3,1,9,5 "SPT6" "transcription elongation protein" 4,5,1,1 "SPT6" "transcription elongation protein" 40,10,0,0 "SPT6" "transcription elongation protein" ytydl243c - 1,5,1,0 "AAD4" "strong similarity to aryl-alcohol dehydrogenase" 2,16,0,0 "AAD4" "strong similarity to aryl-alcohol dehydrogenase" ytyml060w 3,1,5,1 "OGG1" "8-oxoguanine DNA glycosylase" 40,10,0,0 "OGG1" "8-oxoguanine DNA glycosylase" ytycr042c 4,5,1,1 "TSM1" "component of TFIID complex" 4,5,1,4 "TSM1" "component of TFIID complex" 40,10,0,0 "TSM1" "component of TFIID complex" ytypl281c - 1,5,1,0 "ERR2" "enolase related protein" 2,1,0,0 "ERR2" "enolase related protein" Validation Accuracy: 59/181 (32.60%) Validation Frequency class '40/10/0/0': 175/851 (20.56%) Evaluation on propertest data (1292 items): ytykl125w 4,1,1,0 "RRN3" "RNA polymerase I specific transcription factor" 40,10,0,0 "RRN3" "RNA polymerase I specific transcription factor" ytylr020c - 1,6,4,0 "null" "similarity to triacylglycerol lipase" ytydr414c - 30,1,0,0 "ERD1" "required for retention of luminal ER proteins" 40,7,0,0 "ERD1" "required for retention of luminal ER proteins" 6,4,0,0 "ERD1" "required for retention of luminal ER proteins" 6,7,0,0 "ERD1" "required for retention of luminal ER proteins" ytydl077c - 40,25,0,0 "VAM6" "vacuolar carboxypeptidase Y" 6,13,4,0 "VAM6" "vacuolar carboxypeptidase Y" ytyll003w - 11,1,0,0 "SFI1" "similarity to Xenopus laevis XCAP-C" 3,3,1,0 "SFI1" "similarity to Xenopus laevis XCAP-C" ytyer132c - 14,4,3,5 "PMD1" "negative regulator of early meiotic expression" ytyal032c - 4,5,5,1 "PRP45" "pre-mRNA splicing factor" ytypl021w - 30,1,0,0 "ECM23" "similarity to SRD1P" ytymr138w - 3,3,1,0 "CIN4" "GTP-binding protein" 40,4,0,0 "CIN4" "GTP-binding protein" ytygr047c 4,1,1,0 "TFC4" "TFIIIC (transcription initiation factor) subunit, 131 kD" 4,3,1,0 "TFC4" "TFIIIC (transcription initiation factor) subunit, 131 kD" 40,10,0,0 "TFC4" "TFIIIC (transcription initiation factor) subunit, 131 kD" ytyll004w 14,4,3,3 "ORC3" "origin recognition complex, 62 kDa subunit" 3,1,3,0 "ORC3" "origin recognition complex, 62 kDa subunit" 4,5,1,4 "ORC3" "origin recognition complex, 62 kDa subunit" 40,10,0,0 "ORC3" "origin recognition complex, 62 kDa subunit" ytykr064w 4,5,1,4 "null" "weak similarity to transcription factors" 40,10,0,0 "null" "weak similarity to transcription factors" ytyol145c - 3,3,1,0 "CTR9" "required for G1 cyclin expression" 40,4,0,0 "CTR9" "required for G1 cyclin expression" ytyor308c - 4,5,5,1 "SNU66" "component of U4/U6.U5 snRNP" ytymr153w - 8,1,0,0 "NUP53" "component of the karyopherin docking complex of the nuclear pore complex" ytylr450w - 1,6,1,0 "HMG2" "3-hydroxy-3-methylglutaryl-coenzyme A reductase 2" 40,7,0,0 "HMG2" "3-hydroxy-3-methylglutaryl-coenzyme A reductase 2" ytyar050w - 40,1,0,0 "FLO1" "cell wall protein involved in flocculation" ytynl282w 4,1,4,0 "POP3" "involved in processsing of tRNAs and rRNAs" 4,3,3,0 "POP3" "involved in processsing of tRNAs and rRNAs" 40,10,0,0 "POP3" "involved in processsing of tRNAs and rRNAs" ytyhr099w - 4,5,1,4 "TRA1" "component of the Ada-Spt transcriptional regulatory complex" ytylr452c - 13,11,3,7 "SST2" "involved in desensitization to alpha-factor pheromone" 14,4,3,3 "SST2" "involved in desensitization to alpha-factor pheromone" 40,2,0,0 "SST2" "involved in desensitization to alpha-factor pheromone" 6,13,1,0 "SST2" "involved in desensitization to alpha-factor pheromone" ytylr278c - 4,5,1,4 "null" "weak similarity to regulatory proteins" ytyjl186w - 1,5,1,3 "MNN5" "putative mannosyltransferase" ytyol067c 1,5,4,0 "RTG1" "basic helix-loop-helix transcription factor that regulates CIT2 gene expression" 4,5,1,4 "RTG1" "basic helix-loop-helix transcription factor that regulates CIT2 gene expression" 40,10,0,0 "RTG1" "basic helix-loop-helix transcription factor that regulates CIT2 gene expression" ytygl061c - 3,3,3,0 "DUO1" "essential mitotic spindle protein" 40,4,0,0 "DUO1" "essential mitotic spindle protein" ytyil150c 3,1,3,0 "DNA43" "required for S-phase initiation or completion" 3,3,1,0 "DNA43" "required for S-phase initiation or completion" 40,10,0,0 "DNA43" "required for S-phase initiation or completion" ytymr076c - 3,3,2,0 "PDS5" "precocious dissociation of sister chromatids" ytylr105c 4,3,3,0 "SEN2" "tRNA splicing endonuclease beta subunit" 40,10,0,0 "SEN2" "tRNA splicing endonuclease beta subunit" ytyll008w 4,1,4,0 "DRS1" "RNA helicase of the DEAD box family" 40,10,0,0 "DRS1" "RNA helicase of the DEAD box family" 6,10,0,0 "DRS1" "RNA helicase of the DEAD box family" ytyil138c - 14,4,3,1 "TPM2" "tropomyosin, isoform 2" 40,4,0,0 "TPM2" "tropomyosin, isoform 2" ytykr069w - 1,7,1,0 "MET1" "siroheme synthase" ytykl161c - 11,1,0,0 "(MLP1)" "strong similarity to ser/thr-specific protein kinase SLT2P" 13,11,3,13 "(MLP1)" "strong similarity to ser/thr-specific protein kinase SLT2P" 14,1,3,0 "(MLP1)" "strong similarity to ser/thr-specific protein kinase SLT2P" 14,4,3,1 "(MLP1)" "strong similarity to ser/thr-specific protein kinase SLT2P" 3,3,1,0 "(MLP1)" "strong similarity to ser/thr-specific protein kinase SLT2P" ytydl098c - 4,5,5,1 "SNU23" "Putative RNA binding zinc finger protein" ytyml091c - 4,3,3,0 "RPM2" "ribonuclease P precursor, mitochondrial" 40,16,0,0 "RPM2" "ribonuclease P precursor, mitochondrial" ytygl145w - 40,7,0,0 "TIP20" "required for ER to Golgi transport" 8,7,0,0 "TIP20" "required for ER to Golgi transport" ytyjr034w - 2,13,0,0 "PET191" "involved in assembly of cytochrome oxidase" 40,16,0,0 "PET191" "involved in assembly of cytochrome oxidase" 6,10,0,0 "PET191" "involved in assembly of cytochrome oxidase" ytymr094w 3,3,1,0 "CTF13" "kinetochore protein complex, CBF3, 58 KD subunit" 40,10,3,0 "CTF13" "kinetochore protein complex, CBF3, 58 KD subunit" ytypl029w - 1,3,16,0 "SUV3" "ATP-dependent RNA helicase, mitochondrial" 4,1,4,0 "SUV3" "ATP-dependent RNA helicase, mitochondrial" 4,5,5,1 "SUV3" "ATP-dependent RNA helicase, mitochondrial" 4,99,0,0 "SUV3" "ATP-dependent RNA helicase, mitochondrial" 40,16,0,0 "SUV3" "ATP-dependent RNA helicase, mitochondrial" 5,7,0,0 "SUV3" "ATP-dependent RNA helicase, mitochondrial" ytymr095c - 11,1,0,0 "SNO1" "similarity to M.leprae hisH protein" ytyll042c - 6,7,11,0 "APG10" "protein-conjugating enzyme essential for autophagy" ytyjr050w - 4,5,5,1 "ISY1" "pre-mRNA splicing factor" ytyjl033w - 30,1,0,0 "HCA4" "can suppress the U14 snoRNA rRNA processing function" 4,1,4,0 "HCA4" "can suppress the U14 snoRNA rRNA processing function" ytylr046c - 11,7,0,0 "null" "strong similarity to RTA1P and Rtm1p protein" ytyir001c - 4,5,99,0 "SGN1" "similarity to D.melanogaster RNA binding protein" ytyhr109w - 6,7,99,0 "CTM1" "cytochrome c methyltransferase" ytyer172c 4,5,5,1 "BRR2" "RNA helicase-related protein" 40,10,0,0 "BRR2" "RNA helicase-related protein" ytylr127c - 3,3,1,0 "APC2" "component of the anaphase promoting complex" 6,13,1,0 "APC2" "component of the anaphase promoting complex" 6,7,0,0 "APC2" "component of the anaphase promoting complex" ytyjr053w - 3,3,1,3 "BFA1" "spindle assembly checkpoint protein" ytydl025c - 11,1,0,0 "null" "similarity to probable protein kinase NPR1" ytyil173w - 6,4,0,0 "VTH1" "strong similarity to VTH2P and PEP1P, potential membrane glycoprotein" ytymr179w 4,5,1,4 "SPT21" "required for normal transcription at a number of loci" 40,10,0,0 "SPT21" "required for normal transcription at a number of loci" ytyil159w - 14,4,3,1 "BNR1" "regulator of budding" 40,4,0,0 "BNR1" "regulator of budding" ytyor188w - 14,4,3,1 "MSB1" "morphogenesis-related protein" ytylr223c 4,1,4,0 "IFH1" "pre-rRNA processing machinery control protein" 40,10,0,0 "IFH1" "pre-rRNA processing machinery control protein" ytyhr060w - 40,7,0,0 "VMA22" "vacuolar ATPase assembly protein" 6,10,0,0 "VMA22" "vacuolar ATPase assembly protein" ytygr249w - 11,1,0,0 "MGA1" "similarity to heat shock transcription factors" 4,5,1,4 "MGA1" "similarity to heat shock transcription factors" ytyfr038w - 3,1,5,1 "null" "strong similarity to mouse lymphocyte specific helicase" ytyfl050c - 11,7,0,0 "ALR2" "divalent cation transprter" 13,1,1,1 "ALR2" "divalent cation transprter" 40,2,0,0 "ALR2" "divalent cation transprter" 67,4,1,1 "ALR2" "divalent cation transprter" 8,19,0,0 "ALR2" "divalent cation transprter" ytyjl039c 40,10,0,0 "NUP192" "nucleoporin localize at the inner site of the nuclear membrane" 8,1,0,0 "NUP192" "nucleoporin localize at the inner site of the nuclear membrane" ytybr130c - 14,4,3,3 "SHE3" "required for mother cell-specific expression of HO" 40,3,0,0 "SHE3" "required for mother cell-specific expression of HO" 40,4,0,0 "SHE3" "required for mother cell-specific expression of HO" ytyhr127w - 8,7,0,0 "HSN1" "hypothetical protein" ytypr068c - 4,5,99,0 "HOS1" "similarity to human histone deacetylase HD1" ytyer002w - 40,3,0,0 "NOP16" "weak similarity to chicken microfibril-associated protein" ytyer096w - 1,5,1,0 "SHC1" "sporulation specific protein" 14,4,3,5 "SHC1" "sporulation specific protein" ytyor017w - 40,16,0,0 "PET127" "component of mitochondrial translation system" 5,7,0,0 "PET127" "component of mitochondrial translation system" ytyjl214w - 1,5,7,0 "HXT8" "hexose transport protein" 40,2,0,0 "HXT8" "hexose transport protein" 67,7,0,0 "HXT8" "hexose transport protein" 8,19,0,0 "HXT8" "hexose transport protein" ytydl043c 4,5,5,1 "PRP11" "pre-mRNA splicing factor" 40,10,0,0 "PRP11" "pre-mRNA splicing factor" ytyml021c 3,1,5,0 "UNG1" "uracil-DNA glycosylase" 40,10,0,0 "UNG1" "uracil-DNA glycosylase" 40,16,0,0 "UNG1" "uracil-DNA glycosylase" ytydr060w - 30,99,0,0 "MAK21" "protein required for 60S ribosomal subunit biogenesis" 5,99,0,0 "MAK21" "protein required for 60S ribosomal subunit biogenesis" ytynl218w - 3,1,3,0 "MGS1" "similarity to E.coli hypothetical protein in serS 5'region" 30,16,0,0 "MGS1" "similarity to E.coli hypothetical protein in serS 5'region" ytyjr152w - 40,2,0,0 "DAL5" "allantoate permease" 67,19,0,0 "DAL5" "allantoate permease" 8,19,0,0 "DAL5" "allantoate permease" ytyor033c - 1,3,16,0 "EXO1" "exonuclease which interacts with MSH2P" 3,1,5,0 "EXO1" "exonuclease which interacts with MSH2P" ytyhl047c - 11,7,0,0 "TAF1" "siderophore transporter for triacetylfusarinine C" 67,28,0,0 "TAF1" "siderophore transporter for triacetylfusarinine C" ytydl044c - 4,5,5,1 "MTF2" "mitochondrial protein involved in mRNA splicing and protein synthesis" 40,16,0,0 "MTF2" "mitochondrial protein involved in mRNA splicing and protein synthesis" 5,99,0,0 "MTF2" "mitochondrial protein involved in mRNA splicing and protein synthesis" ytyml007w 11,1,0,0 "YAP1" "transcriptional activator involved in oxidative stress response" 4,5,1,4 "YAP1" "transcriptional activator involved in oxidative stress response" 40,10,0,0 "YAP1" "transcriptional activator involved in oxidative stress response" 40,3,0,0 "YAP1" "transcriptional activator involved in oxidative stress response" ytycr010c - 1,5,4,0 "ADY2" "strong similarity to Y.lipolytica GPR1 protein and FUN34P" ytynl139c - 4,5,1,0 "RLR1" "regulatory protein" 5,7,0,0 "RLR1" "regulatory protein" ytynl059c 40,10,0,0 "ARP5" "Actin-related protein" 40,4,0,0 "ARP5" "Actin-related protein" ytylr242c - 40,2,0,0 "ARV1" "involved in sterol uptake and distribution into the plasma membrane" ytygr013w 4,5,5,1 "SNU71" "associated with U1 snRNP, no counterpart in mammalian U1 snRNP" 40,10,0,0 "SNU71" "associated with U1 snRNP, no counterpart in mammalian U1 snRNP" ytyjr153w - 1,5,1,0 "PGU1" "Endo-polygalacturonase" ytyml102w 3,1,3,0 "CAC2" "chromatin assembly complex, subunit p60" 3,1,9,5 "CAC2" "chromatin assembly complex, subunit p60" 40,10,3,0 "CAC2" "chromatin assembly complex, subunit p60" 6,10,0,0 "CAC2" "chromatin assembly complex, subunit p60" ytypl228w - 4,5,5,0 "CET1" "RNA 5'-triphosphatase (mRNA capping enzyme, beta subunit)" ytyil005w - 6,1,0,0 "null" "similarity to protein disulfide isomerases" ytymr106c 3,1,5,1 "YKU80" "component of DNA end-joining repair pathway" 40,10,0,0 "YKU80" "component of DNA end-joining repair pathway" ytyar002w - 8,1,0,0 "NUP60" "nuclear pore protein" ytylr163c - 40,16,0,0 "MAS1" "mitochondrial processing peptidase" 6,7,0,0 "MAS1" "mitochondrial processing peptidase" ytyel003w - 30,4,0,0 "GIM4" "Gim complex component" 40,3,0,0 "GIM4" "Gim complex component" 6,1,0,0 "GIM4" "Gim complex component" ytyml104c - 3,3,1,0 "MDM1" "intermediate filament protein" 40,4,0,0 "MDM1" "intermediate filament protein" ytybl052c - 14,4,3,3 "SAS3" "silencing protein" 4,5,1,4 "SAS3" "silencing protein" ytydl206w - 67,99,0,0 "null" "weak similarity to transporter proteins" ytyjl218w - 1,5,1,0 "null" "strong similarity to E.coli galactoside O-acetyltransferase" ytyfl055w - 1,1,7,0 "AGP3" "amino acid permease" 67,10,0,0 "AGP3" "amino acid permease" ytylr164w - 1,5,1,0 "null" "strong similarity to SDH4P" 2,10,0,0 "null" "strong similarity to SDH4P" ytydl207w 4,7,0,0 "GLE1" "RNA export mediator" 40,10,0,0 "GLE1" "RNA export mediator" 40,3,0,0 "GLE1" "RNA export mediator" 8,1,0,0 "GLE1" "RNA export mediator" ytyor211c - 40,16,0,0 "MGM1" "dynamin-like protein" ytyer008c - 14,4,3,1 "SEC3" "component of exocyst complex" 40,2,0,0 "SEC3" "component of exocyst complex" 40,3,0,0 "SEC3" "component of exocyst complex" 8,16,0,0 "SEC3" "component of exocyst complex" ytypr168w 4,5,1,4 "NUT2" "negative transcription regulator from artifical reporters" 40,10,0,0 "NUT2" "negative transcription regulator from artifical reporters" ytyjl074c - 3,3,1,0 "SMC3" "required for structural maintenance of chromosomes" 30,10,3,0 "SMC3" "required for structural maintenance of chromosomes" ytyor038c 4,5,1,4 "HIR2" "histone transcription regulator" 40,10,0,0 "HIR2" "histone transcription regulator" ytybr217w - 30,25,0,0 "APG12" "component of the autophagic system" 40,25,0,0 "APG12" "component of the autophagic system" 6,13,4,0 "APG12" "component of the autophagic system" ytylr246w - 6,7,1,0 "ERF2" "protein involved in palmitoylation and localization of RAS2P" ytykl112w 1,1,4,0 "ABF1" "ARS-binding factor" 1,2,4,0 "ABF1" "ARS-binding factor" 3,1,3,0 "ABF1" "ARS-binding factor" 3,3,2,0 "ABF1" "ARS-binding factor" 4,5,1,4 "ABF1" "ARS-binding factor" 40,10,0,0 "ABF1" "ARS-binding factor" ytyir027c - 1,2,1,0 "DAL1" "allantoinase" 1,3,1,0 "DAL1" "allantoinase" ytygr112w - 2,13,0,0 "SHY1" "SURF homologue protein" 40,16,0,0 "SHY1" "SURF homologue protein" ytyjr092w - 14,4,3,1 "BUD4" "budding protein" 40,1,0,0 "BUD4" "budding protein" ytykl113c 3,1,3,0 "RAD27" "ssDNA endonuclease and 5'-3'exonuclease" 3,1,5,1 "RAD27" "ssDNA endonuclease and 5'-3'exonuclease" 40,10,0,0 "RAD27" "ssDNA endonuclease and 5'-3'exonuclease" ytyjr078w - 1,1,10,0 "null" "similarity to mammalian indoleamine 2,3-dioxygenase" 1,7,1,0 "null" "similarity to mammalian indoleamine 2,3-dioxygenase" ytykr036c - 4,5,1,4 "CAF4" "CCR4 associated factor" ytybr152w - 30,10,0,0 "SPP381" "Suppressor of Pre-mRNA Processing mutant" 4,5,5,1 "SPP381" "Suppressor of Pre-mRNA Processing mutant" ytyjl090c 3,1,3,0 "DPB11" "involved in DNA replication and S-phase checkpoint" 3,3,1,3 "DPB11" "involved in DNA replication and S-phase checkpoint" 40,10,0,0 "DPB11" "involved in DNA replication and S-phase checkpoint" ytyol116w 1,5,4,0 "MSN1" "transcriptional activator" 30,1,0,0 "MSN1" "transcriptional activator" 4,5,1,4 "MSN1" "transcriptional activator" 40,10,0,0 "MSN1" "transcriptional activator" ytykr050w - 40,2,0,0 "TRK2" "moderate-affinity potassium transport protein" 67,4,1,2 "TRK2" "moderate-affinity potassium transport protein" 8,19,0,0 "TRK2" "moderate-affinity potassium transport protein" ytydr227w 11,1,0,0 "SIR4" "silencing regulatory and DNA-repair protein" 14,10,0,0 "SIR4" "silencing regulatory and DNA-repair protein" 14,4,3,3 "SIR4" "silencing regulatory and DNA-repair protein" 3,1,5,1 "SIR4" "silencing regulatory and DNA-repair protein" 4,5,1,4 "SIR4" "silencing regulatory and DNA-repair protein" 40,10,0,0 "SIR4" "silencing regulatory and DNA-repair protein" ytygr113w - 3,3,3,0 "DAM1" "essential mitotic spindle pole protein" 40,4,0,0 "DAM1" "essential mitotic spindle pole protein" ytyjl076w - 4,1,99,0 "NET1" "required for rDNA silencing and nucleolar integrity" ytyjr159w - 1,5,1,0 "SOR1" "sorbitol dehydrogenase" ytyel022w - 40,8,0,0 "GEA2" "GDP/GTP exchange factor for ARF" 8,7,0,0 "GEA2" "GDP/GTP exchange factor for ARF" ytydl225w - 14,4,3,1 "SHS1" "septin" 3,3,1,0 "SHS1" "septin" 3,3,3,0 "SHS1" "septin" ytyil120w - 11,7,0,0 "QDR1" "similarity to antibiotic resistance proteins" 67,28,0,0 "QDR1" "similarity to antibiotic resistance proteins" ytyml109w - 14,4,3,1 "ZDS2" "multicopy suppressor of SIN4" 3,3,1,0 "ZDS2" "multicopy suppressor of SIN4" ytylr263w 3,1,5,0 "RED1" "meiosis-specific protein" 3,3,2,0 "RED1" "meiosis-specific protein" 30,10,3,0 "RED1" "meiosis-specific protein" 40,10,0,0 "RED1" "meiosis-specific protein" ytyir029w - 1,2,1,0 "DAL2" "allantoinase" 1,3,1,0 "DAL2" "allantoinase" ytydl240w - 14,4,3,5 "LRG1" "GTPase-activating protein of the rho/rac family" ytymr207c - 1,6,1,0 "HFA1" "strong similarity to acetyl-CoA carboxylase" 1,6,10,0 "HFA1" "strong similarity to acetyl-CoA carboxylase" ytynl335w - 1,2,1,0 "null" "similarity to M.verrucaria cyanamide hydratase, identical to hypothetical protein YFL061w" ytybr156c - 3,3,1,0 "SLI15" "Mitotic spindle protein involved in chromosome segregation" ytydl148c - 5,1,0,0 "NOP14" "nuclear and nucleolar protein with possible role in ribosome biogenesis" ytydr499w - 3,1,3,0 "LCD1" "cell cycle checkpoint protein" 3,1,5,0 "LCD1" "cell cycle checkpoint protein" 3,3,1,3 "LCD1" "cell cycle checkpoint protein" 6,7,3,0 "LCD1" "cell cycle checkpoint protein" ytyer109c 14,4,3,1 "FLO8" "required for diploid filamentous growth" 4,5,1,4 "FLO8" "required for diploid filamentous growth" 40,10,0,0 "FLO8" "required for diploid filamentous growth" ytymr129w 40,10,0,0 "POM152" "nuclear pore membrane glycoprotein" 8,1,0,0 "POM152" "nuclear pore membrane glycoprotein" ytycl032w - 13,11,3,7 "STE50" "pheromone response pathway protein" 14,4,3,3 "STE50" "pheromone response pathway protein" ytyml062c - 40,3,0,0 "MFT1" "mitochondrial fusion target protein" 6,4,0,0 "MFT1" "mitochondrial fusion target protein" 8,4,0,0 "MFT1" "mitochondrial fusion target protein" ytymr225c - 40,16,0,0 "MRPL44" "ribosomal protein YMR44, mitochondrial" 5,1,0,0 "MRPL44" "ribosomal protein YMR44, mitochondrial" ytylr442c 14,4,3,3 "SIR3" "silencing regulatory and DNA-repair protein" 3,1,5,1 "SIR3" "silencing regulatory and DNA-repair protein" 4,5,1,4 "SIR3" "silencing regulatory and DNA-repair protein" 40,10,0,0 "SIR3" "silencing regulatory and DNA-repair protein" ytylr014c 1,3,13,0 "PPR1" "transcription factor regulating pyrimidine pathway" 4,5,1,4 "PPR1" "transcription factor regulating pyrimidine pathway" 40,10,0,0 "PPR1" "transcription factor regulating pyrimidine pathway" ytynr008w - 1,6,1,0 "LRO1" "a lecithin cholesterol acyltransferase-like gene, mediates diacylglycerol esterification" ytybl090w - 40,16,0,0 "MRP21" "Mitochondrial ribosomal protein" 5,1,0,0 "MRP21" "Mitochondrial ribosomal protein" ytypr031w - 4,99,0,0 "null" "similarity to human zinc-finger protein BR140" ytymr080c - 1,3,16,0 "NAM7" "nonsense-mediated mRNA decay protein" 40,3,0,0 "NAM7" "nonsense-mediated mRNA decay protein" 5,7,0,0 "NAM7" "nonsense-mediated mRNA decay protein" ytyhr011w - 5,10,0,0 "DIA4" "strong similarity to seryl-tRNA synthetases" ytylr363c - 1,3,16,0 "NMD4" "NAM7P interacting protein" ytynr023w 4,5,1,4 "SNF12" "component of SWI/SNF global transcription activator complex" 40,10,0,0 "SNF12" "component of SWI/SNF global transcription activator complex" ytykr072c 3,3,1,0 "SIS2" "involved in cell cycle-specific gene expression" 4,5,1,4 "SIS2" "involved in cell cycle-specific gene expression" 40,10,0,0 "SIS2" "involved in cell cycle-specific gene expression" ytykl055c - 1,6,99,0 "OAR1" "putative 3-oxoacyl-(acyl carrier protein) reductase" 2,13,0,0 "OAR1" "putative 3-oxoacyl-(acyl carrier protein) reductase" ytylr443w - 30,1,0,0 "ECM7" "involved in cell wall biogenesis and architecture" ytyfl001w 4,3,6,0 "DEG1" "pseudouridine synthase" 40,10,0,0 "DEG1" "pseudouridine synthase" 40,3,0,0 "DEG1" "pseudouridine synthase" ytydl087c - 4,5,5,1 "LUC7" "yeast U1 snRNP protein with a role in 5' splice site recognition" ytyal041w 13,11,3,7 "CDC24" "GTP/GDP exchange factor for CDC42P" 14,1,3,0 "CDC24" "GTP/GDP exchange factor for CDC42P" 14,4,3,1 "CDC24" "GTP/GDP exchange factor for CDC42P" 14,4,3,3 "CDC24" "GTP/GDP exchange factor for CDC42P" 3,3,1,0 "CDC24" "GTP/GDP exchange factor for CDC42P" 40,10,0,0 "CDC24" "GTP/GDP exchange factor for CDC42P" 40,2,0,0 "CDC24" "GTP/GDP exchange factor for CDC42P" 62,2,5,0 "CDC24" "GTP/GDP exchange factor for CDC42P" ytygr070w - 1,5,4,0 "ROM1" "GDP/GTP exchange protein for RHO1P" 14,1,3,0 "ROM1" "GDP/GTP exchange protein for RHO1P" 14,4,3,1 "ROM1" "GDP/GTP exchange protein for RHO1P" 62,2,5,0 "ROM1" "GDP/GTP exchange protein for RHO1P" ytykl057c 4,7,0,0 "NUP120" "nuclear pore protein" 40,10,0,0 "NUP120" "nuclear pore protein" 8,1,0,0 "NUP120" "nuclear pore protein" ytygr057c - 8,7,0,0 "LST7" "required for amino acid permease transport from the Golgi to the cell surface" ytyil128w 3,1,5,1 "MET18" "involved in NER repair and RNA polymerase II transcription" 4,5,1,4 "MET18" "involved in NER repair and RNA polymerase II transcription" 40,10,0,0 "MET18" "involved in NER repair and RNA polymerase II transcription" ytybl079w 3,3,3,0 "NUP170" "nuclear pore protein" 40,10,0,0 "NUP170" "nuclear pore protein" 8,1,0,0 "NUP170" "nuclear pore protein" ytyfl003c 3,1,5,0 "MSH4" "meiosis-specific protein" 3,3,2,0 "MSH4" "meiosis-specific protein" 40,10,0,0 "MSH4" "meiosis-specific protein" ytyal029c - 14,4,3,1 "MYO4" "myosin heavy chain, unconventional (class V) isoform" 14,4,3,3 "MYO4" "myosin heavy chain, unconventional (class V) isoform" 3,3,3,0 "MYO4" "myosin heavy chain, unconventional (class V) isoform" 40,4,0,0 "MYO4" "myosin heavy chain, unconventional (class V) isoform" 8,22,0,0 "MYO4" "myosin heavy chain, unconventional (class V) isoform" ytykl138c - 40,16,0,0 "MRPL31" "ribosomal protein YmL31, mitochondrial" 5,1,0,0 "MRPL31" "ribosomal protein YmL31, mitochondrial" ytybr003w - 1,6,7,0 "COQ1" "hexaprenyl pyrophosphate synthetase precursor" 1,7,1,0 "COQ1" "hexaprenyl pyrophosphate synthetase precursor" 40,16,0,0 "COQ1" "hexaprenyl pyrophosphate synthetase precursor" ytydr440w - 3,3,1,0 "DOT1" "putative ATPase" ytyel061c 3,3,1,0 "CIN8" "kinesin-related protein" 40,10,0,0 "CIN8" "kinesin-related protein" 40,4,0,0 "CIN8" "kinesin-related protein" 8,22,0,0 "CIN8" "kinesin-related protein" ytyfl004w - 1,4,0,0 "VTC2" "putative polyphosphate synthetase" ytybr192w - 2,13,0,0 "RIM2" "mitochondrial carrier protein (MCF)" 40,16,0,0 "RIM2" "mitochondrial carrier protein (MCF)" 67,16,0,0 "RIM2" "mitochondrial carrier protein (MCF)" 8,4,0,0 "RIM2" "mitochondrial carrier protein (MCF)" ytyol156w - 1,5,7,0 "HXT11" "low affinity glucose transport protein" 40,2,0,0 "HXT11" "low affinity glucose transport protein" 67,7,0,0 "HXT11" "low affinity glucose transport protein" 8,19,0,0 "HXT11" "low affinity glucose transport protein" ytykl139w 4,5,1,4 "CTK1" "carboxy-terminal domain (CTD) kinase, alpha subunit" 40,10,0,0 "CTK1" "carboxy-terminal domain (CTD) kinase, alpha subunit" ytyml082w - 1,1,1,0 "null" "similarity to N.crassa O-succinylhomoserine (thiol)-lyase" ytydr268w - 40,16,0,0 "MSW1" "tryptophanyl-tRNA synthetase, mitochondrial" 5,10,0,0 "MSW1" "tryptophanyl-tRNA synthetase, mitochondrial" ytygl071w 13,1,1,1 "RCS1" "iron-regulated transcriptional repressor" 4,5,1,4 "RCS1" "iron-regulated transcriptional repressor" 40,10,0,0 "RCS1" "iron-regulated transcriptional repressor" ytyjl197w - 6,13,1,0 "UBP12" "ubiquitin C-terminal hydrolase" ytylr289w - 5,4,0,0 "GUF1" "strong similarity to E. coli elongation factor-type GTP-binding protein lepa" ytydr363w - 4,5,1,4 "ESC2" "involved in silencing" ytyil147c - 1,5,4,0 "SLN1" "two-component signal transducer" 10,5,0,0 "SLN1" "two-component signal transducer" 11,1,0,0 "SLN1" "two-component signal transducer" 13,11,3,13 "SLN1" "two-component signal transducer" 40,2,0,0 "SLN1" "two-component signal transducer" 63,1,0,0 "SLN1" "two-component signal transducer" ytycl055w 14,4,3,3 "KAR4" "regulatory protein required for pheromone induction of karyogamy genes" 3,3,1,0 "KAR4" "regulatory protein required for pheromone induction of karyogamy genes" 3,3,2,0 "KAR4" "regulatory protein required for pheromone induction of karyogamy genes" 4,5,1,4 "KAR4" "regulatory protein required for pheromone induction of karyogamy genes" 40,10,0,0 "KAR4" "regulatory protein required for pheromone induction of karyogamy genes" ytyjl198w - 1,4,7,0 "PHO90" "low affinity phosphate transporter" 13,1,3,3 "PHO90" "low affinity phosphate transporter" 67,4,7,0 "PHO90" "low affinity phosphate transporter" ytymr167w 3,1,5,0 "MLH1" "DNA mismatch repair protein" 3,3,2,0 "MLH1" "DNA mismatch repair protein" 40,10,0,0 "MLH1" "DNA mismatch repair protein" ytycr073c - 11,1,0,0 "SSK22" "MAP kinase kinase kinase" 13,11,3,13 "SSK22" "MAP kinase kinase kinase" ytyor190w - 1,5,1,0 "SPR1" "exo-1,3-beta-glucanase precursor" 14,4,3,5 "SPR1" "exo-1,3-beta-glucanase precursor" 40,1,0,0 "SPR1" "exo-1,3-beta-glucanase precursor" ytydr110w - 3,1,3,0 "FOB1" "DNA replication fork blocking protein" 3,1,5,0 "FOB1" "DNA replication fork blocking protein" 40,3,0,0 "FOB1" "DNA replication fork blocking protein" ytybr102c - 40,3,0,0 "EXO84" "exocyst protein essential for secretion" 8,16,0,0 "EXO84" "exocyst protein essential for secretion" ytyor351c 3,1,5,0 "MEK1" "ser/thr protein kinase" 3,3,2,0 "MEK1" "ser/thr protein kinase" 40,10,0,0 "MEK1" "ser/thr protein kinase" ytyjr042w 14,4,3,5 "NUP85" "nuclear pore protein" 4,3,3,0 "NUP85" "nuclear pore protein" 40,10,0,0 "NUP85" "nuclear pore protein" 8,1,0,0 "NUP85" "nuclear pore protein" ytyal048c - 6,7,0,0 "null" "vacuolar aspartic proteasse" 8,16,0,0 "null" "vacuolar aspartic proteasse" ytyjr043c 3,1,3,0 "POL32" "polymerase-associated gene, third (55 kDa) subunit of DNA polymerase delta" 3,1,5,1 "POL32" "polymerase-associated gene, third (55 kDa) subunit of DNA polymerase delta" 40,10,0,0 "POL32" "polymerase-associated gene, third (55 kDa) subunit of DNA polymerase delta" ytyjr109c - 1,1,1,0 "CPA2" "arginine-specific carbamoylphosphate synthase, large chain" 40,3,0,0 "CPA2" "arginine-specific carbamoylphosphate synthase, large chain" ytyor192c - 1,3,19,0 "null" "strong similarity to Thi10p" 67,16,0,0 "null" "strong similarity to Thi10p" 67,19,0,0 "null" "strong similarity to Thi10p" ytyer149c - 14,4,3,1 "PEA2" "involved in oriented growth toward mating partner" 14,4,3,3 "PEA2" "involved in oriented growth toward mating partner" ytyil084c 14,4,3,5 "SDS3" "transcriptional regulator" 4,5,1,4 "SDS3" "transcriptional regulator" 40,10,0,0 "SDS3" "transcriptional regulator" ytyhl018w - 1,7,99,0 "null" "similarity to human pterin-4-alpha-carbinolamine dehydratase" ytynl298w - 3,3,3,0 "CLA4" "ser/thr protein kinase" 30,4,0,0 "CLA4" "ser/thr protein kinase" ytypr070w - 4,5,1,1 "MED1" "component of RNA polymerase II holoenzyme and mediator subcomplex" ytygr239c - 30,19,0,0 "PEX21" "peroxin, essential for peroxisomal targeting by the PTS2 pathway" 6,4,0,0 "PEX21" "peroxin, essential for peroxisomal targeting by the PTS2 pathway" 8,10,0,0 "PEX21" "peroxin, essential for peroxisomal targeting by the PTS2 pathway" ytykl173w - 5,4,0,0 "SNU114" "U5 snRNP-specific protein" ytymr280c 1,5,4,0 "CAT8" "transcription factor involved in gluconeogenesis" 2,1,0,0 "CAT8" "transcription factor involved in gluconeogenesis" 4,5,1,4 "CAT8" "transcription factor involved in gluconeogenesis" 40,10,0,0 "CAT8" "transcription factor involved in gluconeogenesis" ytyhr211w - 4,5,1,4 "FLO5" "member of the FLO1P family of flocculation proteins" ytyel069c - 1,5,7,0 "HXT13" "high-affinity hexose transporter" 40,2,0,0 "HXT13" "high-affinity hexose transporter" 67,7,0,0 "HXT13" "high-affinity hexose transporter" 8,19,0,0 "HXT13" "high-affinity hexose transporter" ytybr200w - 14,1,3,99 "BEM1" "bud emergence mediator" 14,4,3,1 "BEM1" "bud emergence mediator" 14,4,3,3 "BEM1" "bud emergence mediator" 3,3,1,0 "BEM1" "bud emergence mediator" 40,4,0,0 "BEM1" "bud emergence mediator" ytybr294w - 1,1,1,0 "SUL1" "high-affinity sulfate transport protein" 13,1,3,1 "SUL1" "high-affinity sulfate transport protein" 40,2,0,0 "SUL1" "high-affinity sulfate transport protein" 67,4,7,0 "SUL1" "high-affinity sulfate transport protein" 8,19,0,0 "SUL1" "high-affinity sulfate transport protein" ytycr092c 3,1,5,0 "MSH3" "DNA mismatch repair protein" 40,10,0,0 "MSH3" "DNA mismatch repair protein" ytybl009w - 11,1,0,0 "null" "strong similarity to DNA damage responsive ALK1P" ytylr310c - 1,2,4,0 "CDC25" "GDP/GTP exchange factor for RAS1P and RAS2P" 1,3,13,0 "CDC25" "GDP/GTP exchange factor for RAS1P and RAS2P" 1,5,4,0 "CDC25" "GDP/GTP exchange factor for RAS1P and RAS2P" 13,1,1,1 "CDC25" "GDP/GTP exchange factor for RAS1P and RAS2P" 13,11,3,1 "CDC25" "GDP/GTP exchange factor for RAS1P and RAS2P" 3,3,1,0 "CDC25" "GDP/GTP exchange factor for RAS1P and RAS2P" 3,3,2,0 "CDC25" "GDP/GTP exchange factor for RAS1P and RAS2P" 40,2,0,0 "CDC25" "GDP/GTP exchange factor for RAS1P and RAS2P" 62,2,5,0 "CDC25" "GDP/GTP exchange factor for RAS1P and RAS2P" ytybl105c - 11,1,0,0 "PKC1" "ser/thr protein kinase" 14,1,3,0 "PKC1" "ser/thr protein kinase" 14,4,3,1 "PKC1" "ser/thr protein kinase" 3,3,1,0 "PKC1" "ser/thr protein kinase" 40,3,0,0 "PKC1" "ser/thr protein kinase" ytynl128w - 10,1,99,0 "TEP1" "weak similarity to tensin and to the mammalian tumor suppressor gene product MMAC1/PTEN/TEP1" ytyol006c 3,1,3,0 "TOP1" "DNA topoisomerase I" 3,1,5,0 "TOP1" "DNA topoisomerase I" 4,99,0,0 "TOP1" "DNA topoisomerase I" 40,10,0,0 "TOP1" "DNA topoisomerase I" ytygr177c - 1,5,1,0 "ATF2" "alcohol O-acetyltransferase" ytyjr049c - 13,1,1,1 "UTR1" "associated with ferric reductase activity" ytyjl140w 11,1,0,0 "RPB4" "DNA-directed RNA polymerase II, 32 kDa subunit" 4,5,1,1 "RPB4" "DNA-directed RNA polymerase II, 32 kDa subunit" 40,10,0,0 "RPB4" "DNA-directed RNA polymerase II, 32 kDa subunit" ytyjl126w - 1,2,1,0 "NIT2" "nitrilase" ytydr480w 14,1,0,0 "DIG2" "MAP kinase-associated protein, down-regulator of invasive growth and mating" 14,4,3,3 "DIG2" "MAP kinase-associated protein, down-regulator of invasive growth and mating" 40,10,0,0 "DIG2" "MAP kinase-associated protein, down-regulator of invasive growth and mating" ytyjl127c 4,5,1,4 "SPT10" "transcription regulatory protein" 40,10,0,0 "SPT10" "transcription regulatory protein" ytyjl047c - 29,99,0,0 "RTT101" "weak similarity to CDC53P" ytypl153c 10,1,99,0 "RAD53" "ser/thr/tyr protein kinase" 3,1,5,1 "RAD53" "ser/thr/tyr protein kinase" 3,3,1,3 "RAD53" "ser/thr/tyr protein kinase" 40,10,0,0 "RAD53" "ser/thr/tyr protein kinase" ytylr233c 3,1,3,0 "EST1" "telomere elongation protein" 30,10,3,0 "EST1" "telomere elongation protein" 40,10,0,0 "EST1" "telomere elongation protein" ytylr139c - 4,99,0,0 "SLS1" "suppresses lethality of SSM4 deletion" 40,16,0,0 "SLS1" "suppresses lethality of SSM4 deletion" ytyjr144w - 3,1,5,1 "MGM101" "mitochondrial genome maintenance protein" 40,16,0,0 "MGM101" "mitochondrial genome maintenance protein" ytymr285c - 2,16,0,0 "NGL2" "similarity to CCR4P" ytyjl222w - 6,4,0,0 "VTH2" "strong similarity to PEP1P" 8,13,0,0 "VTH2" "strong similarity to PEP1P" ytyll057c - 11,7,1,0 "null" "similarity to E.coli dioxygenase" ytygr274c 3,1,9,5 "TAF145" "TFIID subunit (TBP-associated factor), 145 kD" 4,5,1,1 "TAF145" "TFIID subunit (TBP-associated factor), 145 kD" 40,10,0,0 "TAF145" "TFIID subunit (TBP-associated factor), 145 kD" ytydl037c - 1,5,1,0 "null" "strong similarity to glucan 1,4-alpha-glucosidase" ytyjl223c - 11,1,0,0 "PAU1" "strong similarity to members of the SRP1P/TIP1P family" ytyjr160c - 1,5,7,0 "null" "strong similarity to MAL31P" 67,7,0,0 "null" "strong similarity to MAL31P" ytyfl060c - 11,1,0,0 "SNO3" "strong similarity to SNO1 and SNO2" ytyml015c 4,5,1,1 "TAF40" "TFIID subunit (TBP-associated factor), 40KD" 40,10,0,0 "TAF40" "TFIID subunit (TBP-associated factor), 40KD" ytykr103w - 11,7,0,0 "null" "similarity to multidrug resistance proteins" 67,50,25,0 "null" "similarity to multidrug resistance proteins" ytydr135c - 11,7,0,0 "YCF1" "glutathione S-conjugate transporter, vacuolar" 40,25,0,0 "YCF1" "glutathione S-conjugate transporter, vacuolar" 67,50,25,0 "YCF1" "glutathione S-conjugate transporter, vacuolar" 8,13,0,0 "YCF1" "glutathione S-conjugate transporter, vacuolar" ytynl227c - 6,1,0,0 "null" "similarity to dnaJ-like proteins" ytydr310c 4,5,1,4 "SUM1" "suppressor of SIR mutations" 40,10,0,0 "SUM1" "suppressor of SIR mutations" ytyol105c - 11,1,0,0 "WSC3" "cell wall integrity and stress response component 3" 40,1,0,0 "WSC3" "cell wall integrity and stress response component 3" ytymr019w 4,5,1,4 "STB4" "weak similarity to YIL130w, PUT3P and other transcription factors" 40,10,0,0 "STB4" "weak similarity to YIL130w, PUT3P and other transcription factors" ytynl068c 4,99,0,0 "FKH2" "homology to D.melanogaster forkhead protein" 40,10,0,0 "FKH2" "homology to D.melanogaster forkhead protein" ytycr099c - 6,4,0,0 "null" "strong similarity to PEP1P, VTH1P and VTH22p" ytyhr073w - 1,6,1,0 "OSH3" "similarity to OSH1P, YDL019c and mammalian oxysterol-binding protei" ytynl242w - 14,4,3,5 "APG2" "required for sporulation" 3,3,2,0 "APG2" "required for sporulation" ytybr208c - 1,1,10,0 "DUR1,2" "urea amidolyase" 1,2,1,0 "DUR1,2" "urea amidolyase" 1,3,1,0 "DUR1,2" "urea amidolyase" ytyjl145w - 1,6,13,0 "null" "weak similarity to T.pacificus retinal-binding protein" ytydr311w 3,1,5,1 "TFB1" "TFIIH subunit (transcription initiation factor), 75 kD" 4,5,1,1 "TFB1" "TFIIH subunit (transcription initiation factor), 75 kD" 40,10,0,0 "TFB1" "TFIIH subunit (transcription initiation factor), 75 kD" ytynl309w - 4,5,1,4 "STB1" "SIN3P binding protein" ytylr318w 3,1,3,0 "EST2" "catalytic subunit of the telomerase" 30,10,3,0 "EST2" "catalytic subunit of the telomerase" 40,10,0,0 "EST2" "catalytic subunit of the telomerase" ytyhr156c - 8,22,0,0 "null" "weak similarity to mouse kinesin KIF3B" ytyir033w 3,1,9,5 "MGA2" "may be involved in the remodeling chromatin structure" 40,10,0,0 "MGA2" "may be involved in the remodeling chromatin structure" ytymr117c - 40,5,0,0 "SPC24" "spindle pole body protein" ytykl040c - 1,2,1,0 "NFU1" "iron homeostasis" 13,1,1,1 "NFU1" "iron homeostasis" ytydr488c - 3,3,1,0 "PAC11" "required in the absence of CIN8P" 40,4,0,0 "PAC11" "required in the absence of CIN8P" 8,22,0,0 "PAC11" "required in the absence of CIN8P" ytypl254w 4,5,1,4 "HFI1" "transcriptional coactivator" 40,10,0,0 "HFI1" "transcriptional coactivator" ytylr174w - 1,5,1,0 "IDP2" "isocitrate dehydrogenase, cytosolic" 2,10,0,0 "IDP2" "isocitrate dehydrogenase, cytosolic" 40,3,0,0 "IDP2" "isocitrate dehydrogenase, cytosolic" ytybr240c 4,5,1,4 "THI2" "regulator of the thiamine biosynthetic genes" 40,10,0,0 "THI2" "regulator of the thiamine biosynthetic genes" ytyal011w - 40,16,0,0 "FUN36" "weak similarity to Mus musculus p53-associated cellular protein" ytymr053c - 4,5,1,4 "STB2" "SIN3P binding protein" ytyol044w - 40,19,0,0 "PEX15" "required for peroxisome assembly - peroxin" 8,10,0,0 "PEX15" "required for peroxisome assembly - peroxin" ytybr081c 4,5,1,4 "SPT7" "involved in alteration of transcription start site selection" 40,10,0,0 "SPT7" "involved in alteration of transcription start site selection" ytykl041w - 40,22,0,0 "VPS24" "endosomal Vps protein complex subunit" 6,4,0,0 "VPS24" "endosomal Vps protein complex subunit" 8,13,0,0 "VPS24" "endosomal Vps protein complex subunit" ytydl058w - 40,3,0,0 "USO1" "intracellular protein transport protein" 8,7,0,0 "USO1" "intracellular protein transport protein" ytymr213w - 3,3,1,0 "CEF1" "required during G2/M transition" ytygr202c - 1,6,1,0 "PCT1" "cholinephosphate cytidylyltransferase" 40,7,0,0 "PCT1" "cholinephosphate cytidylyltransferase" ytyor048c 4,1,4,0 "RAT1" "5'-3' exoribonuclease" 40,10,0,0 "RAT1" "5'-3' exoribonuclease" 8,1,0,0 "RAT1" "5'-3' exoribonuclease" ytyer044c-a - 14,4,3,5 "MEI4" "meiosis-specific protein" 3,3,2,0 "MEI4" "meiosis-specific protein" ytyal013w - 1,6,10,0 "DEP1" "regulator of phospholipid metabolism" 40,3,0,0 "DEP1" "regulator of phospholipid metabolism" ytylr191w - 40,19,0,0 "PEX13" "peroxisomal protein involved in protein import - peroxin" 6,4,0,0 "PEX13" "peroxisomal protein involved in protein import - peroxin" 8,10,0,0 "PEX13" "peroxisomal protein involved in protein import - peroxin" ytylr272c 40,10,3,0 "YCS4" "subunit of condensin protein complex" ytyil035c 3,3,1,0 "CKA1" "casein kinase II, catalytic alpha chain" 4,3,99,0 "CKA1" "casein kinase II, catalytic alpha chain" 40,10,0,0 "CKA1" "casein kinase II, catalytic alpha chain" ytylr418c 4,5,1,4 "CDC73" "DNA-directed RNA polymerase II accessory protein" 40,10,0,0 "CDC73" "DNA-directed RNA polymerase II accessory protein" ytylr004c - 67,19,0,0 "null" "similarity to allantoate transport protein" ytygl027c - 1,5,1,0 "CWH41" "ER glucosidase I" 30,1,0,0 "CWH41" "ER glucosidase I" 40,7,0,0 "CWH41" "ER glucosidase I" ytyel032w 3,1,3,0 "MCM3" "replication initiation protein" 40,10,0,0 "MCM3" "replication initiation protein" 40,3,0,0 "MCM3" "replication initiation protein" ytybl067c - 6,13,0,0 "UBP13" "ubiquitin carboxyl-terminal hydrolase" ytydl090c - 1,6,7,0 "RAM1" "protein farnesyltransferase, beta subunit" 10,1,99,0 "RAM1" "protein farnesyltransferase, beta subunit" 40,3,0,0 "RAM1" "protein farnesyltransferase, beta subunit" 6,7,0,0 "RAM1" "protein farnesyltransferase, beta subunit" ytylr353w - 14,4,3,1 "BUD8" "budding protein" 30,1,0,0 "BUD8" "budding protein" ytyhr002w - 1,3,19,0 "null" "similarity to bovine mitochondrial carrier protein/Grave's disease carrier protein" 67,16,0,0 "null" "similarity to bovine mitochondrial carrier protein/Grave's disease carrier protein" 8,4,0,0 "null" "similarity to bovine mitochondrial carrier protein/Grave's disease carrier protein" Propertest Accuracy: 75/266 (28.20%) Propertest Frequency class '40/10/0/0': 268/1292 (20.74%) New (unknown) data (851 items): ytymr057c - 99,0,0,0 "null" "hypothetical protein" ytymr172c-a - 99,0,0,0 "null" "questionable ORF" ytyor080w - 99,0,0,0 "DIA2" "weak similarity to TRCDSEMBL:RNRNAHOP_1 Rattus norvegicus mRNA for Hsp70/Hsp90 organizing protein" ytyel035c - 99,0,0,0 "UTR5" "weak similarity to Neisseria gonorrhoeae PilG protein" ytydl172c - 99,0,0,0 "null" "questionable ORF" ytydl238c - 98,0,0,0 "null" "similarity to E.coli hypothetical protein and to chlorohydrolases" ytyal018c - 99,0,0,0 "null" "weak similarity to hypothetical proteins YOL047c and YOL048c" ytydr095c - 99,0,0,0 "null" "hypothetical protein" ytymr313c - 99,0,0,0 "null" "similarity to YKR089c and YOR081c" ytylr021w - 99,0,0,0 "null" "hypothetical protein" ytypr105c - 99,0,0,0 "COD1" "similarity to hypothetical protein SPCC338.13 S. pombe" ytylr022c - 99,0,0,0 "null" "similarity to C.elegans and M.jannaschii hypothetical proteins" ytyor242c - 99,0,0,0 "SSP2" "weak similarity to M.pneumoniae probable ABC transport permease" ytyll005c - 99,0,0,0 "SPO75" "similarity to A.thaliana hyp1 protein" ytydl239c - 99,0,0,0 "ADY3" "hypothetical protein" ytydl079c - 98,0,0,0 "MRK1" "ser/thr protein kinase" ytyjl185c - 99,0,0,0 "null" "hypothetical protein" ytymr075c-a - 99,0,0,0 "null" "questionable ORF" ytyil054w - 99,0,0,0 "FYV2" "weak similarity to fruit fly NADH dehydrogenase" ytyol160w - 99,0,0,0 "null" "hypothetical protein" ytyil055c - 99,0,0,0 "null" "hypothetical protein" ytynl269w - 99,0,0,0 "null" "hypothetical protein" ytyll007c - 99,0,0,0 "null" "hypothetical protein" ytydl175c - 99,0,0,0 "null" "weak similarity to cellular nucleic acid binding proteins" ytyfr012w - 99,0,0,0 "null" "similarity to hypothetical protein YOL019w" ytydl002c - 98,0,0,0 "NHP10" "Non-histone protein" ytypr202w - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytyil151c - 99,0,0,0 "null" "similarity to mitochondrial aldehyde dehydrogenase Ald1p" ytydr193w - 99,0,0,0 "null" "questionable ORF" ytydl176w - 99,0,0,0 "null" "hypothetical protein" ytyil057c - 99,0,0,0 "null" "strong similarity to YER067w" ytydl177c - 99,0,0,0 "null" "similarity to hypothetical protein YCR059c" ytypr203w - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytylr454w - 99,0,0,0 "null" "similarity to YPR117w" ytygl129c - 98,0,0,0 "RSM23" "similarity to S.pombe hypothetical protein SPBC29A3.15C - putative mitochondrial function" ytycr063w - 98,0,0,0 "BUD31" "strong similarity to Xenopus G10 and human edg-2 protein" ytycl046w - 99,0,0,0 "null" "questionable ORF" ytykl147c - 99,0,0,0 "null" "questionable ORF" ytymr158w - 99,0,0,0 "null" "weak similarity to E.coli ribosomal S8 protein" ytygl064c - 99,0,0,0 "null" "similarity to YLR276c and YKR024c" ytypl027w - 99,0,0,0 "SMA1" "hypothetical protein" ytyil058w - 99,0,0,0 "null" "hypothetical protein" ytycr064c - 99,0,0,0 "null" "questionable ORF" ytybl010c - 99,0,0,0 "null" "hypothetical protein" ytylr122c - 99,0,0,0 "null" "hypothetical protein" ytyar070c - 99,0,0,0 "null" "hypothetical protein" ytylr456w - 99,0,0,0 "null" "strong similarity to YPR172w" ytymr254c - 99,0,0,0 "null" "hypothetical protein" ytyhr105w - 99,0,0,0 "null" "weak similarity to MVP1P" ytygr242w - 99,0,0,0 "null" "questionable ORF" ytynl034w - 99,0,0,0 "null" "strong similarity to YNL018c" ytyhl023c - 99,0,0,0 "null" "weak similarity to TRCDSEMBL:SPBC543_4 hypothetical protein S.pombe" ytyor183w - 99,0,0,0 "FYV12" "hypothetical protein" ytyhr040w - 99,0,0,0 "null" "weak similarity to HIT1P" ytybl012c - 99,0,0,0 "null" "questionable ORF" ytykl083w - 99,0,0,0 "null" "questionable ORF" ytyjl112w - 99,0,0,0 "MDV1" "similarity to MET30P and N.crassa sulfur controller-2" ytygl066w - 99,0,0,0 "null" "similarity to human ATAXIN 7" ytyjl018w - 99,0,0,0 "null" "questionable ORF" ytyor345c - 99,0,0,0 "null" "questionable ORF" ytyjl019w - 99,0,0,0 "null" "weak similarity to hypothetical protein C. elegans" ytyer119c-a - 99,0,0,0 "null" "questionable ORF" ytylr125w - 99,0,0,0 "null" "hypothetical protein" ytyil091c - 99,0,0,0 "null" "weak similarity to SPT5P" ytypr049c - 99,0,0,0 "CVT9" "similarity to USO1P" ytygl228w - 99,0,0,0 "SHE10" "similarity to hypothetical protein YFR039c" ytycr068w - 99,0,0,0 "CVT17" "similarity to starvation induced pSI-7 protein of C. fluvum" ytyor012w - 99,0,0,0 "null" "similarity to YDR391c" ytyjr038c - 99,0,0,0 "null" "questionable ORF" ytydr295c - 99,0,0,0 "PLO2" "weak similarity to USO1P, YPR179c and fruit fly tropomyosin" ytymr192w - 99,0,0,0 "null" "similarity to mouse Tbc1 protein" ytyil092w - 99,0,0,0 "null" "hypothetical protein" ytybr032w - 99,0,0,0 "null" "hypothetical protein" ytyer093c - 99,0,0,0 "null" "weak similarity to S.epidermidis PepB protein" ytypl062w - 99,0,0,0 "null" "hypothetical protein" ytyjr134c - 98,0,0,0 "SGM1" "similarity to paramyosin, myosin" ytyor282w - 99,0,0,0 "null" "questionable ORF" ytybl111c - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytydl105w - 99,0,0,0 "QRI2" "weak similarity to proteins of unknown function" ytykl183w - 99,0,0,0 "LOT5" "hypothetical protein" ytygl260w - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytydr458c - 99,0,0,0 "null" "similarity to hypothetical protein YML034w and YML033w" ytygr089w - 99,0,0,0 "null" "weak similarity to rat tropomyosin" ytyjl118w - 99,0,0,0 "null" "hypothetical protein" ytyjr136c - 99,0,0,0 "null" "weak similarity to human 3',5'-cyclic-GMP phosphodiesterase" ytyjl119c - 99,0,0,0 "null" "questionable ORF" ytyor111w - 99,0,0,0 "null" "weak similarity to B.subtilis maf protein" ytyml006c - 99,0,0,0 "GIS4" "hypothetical protein" ytygl168w - 99,0,0,0 "null" "questionable ORF" ytylr320w - 99,0,0,0 "null" "hypothetical protein" ytypr083w - 99,0,0,0 "null" "hypothetical protein" ytyjl215c - 99,0,0,0 "null" "hypothetical protein" ytyjr072c - 99,0,0,0 "null" "strong similarity to C.elegans hypothetical protein and similarity to YLR243w" ytygl263w - 99,0,0,0 "COS12" "similarity to subtelomeric encoded proteins" ytylr227c - 99,0,0,0 "ADY4" "hypothetical protein" ytykl187c - 99,0,0,0 "null" "strong similarity to hypothetical protein YLR413w" ytydr221w - 99,0,0,0 "null" "weak similarity to the beta subunit of an ER luminal alpha-glucosidase from mouse" ytyjl150w - 99,0,0,0 "null" "questionable ORF" ytykl014c - 99,0,0,0 "null" "similarity to hypothetical protein SPCC14G10.02 S. pombe" ytylr322w - 99,0,0,0 "null" "questionable ORF" ytylr068w - 99,0,0,0 "FYV7" "hypothetical protein" ytylr323c - 99,0,0,0 "null" "weak similarity to N.crassa uvs2 protein" ytydr396w - 99,0,0,0 "null" "hypothetical protein" ytydr491c - 99,0,0,0 "null" "questionable ORF" ytyfr057w - 99,0,0,0 "null" "weak similarity to CHA4P" ytybr134w - 99,0,0,0 "null" "questionable ORF" ytyjl058c - 99,0,0,0 "null" "strong similarity to hypothetical protein YBR270c" ytykr033c - 99,0,0,0 "null" "questionable ORF" ytylr324w - 99,0,0,0 "null" "strong similarity to YGR004w" ytycl010c - 99,0,0,0 "null" "strong similarity to Saccharomyces pastorianus hypothetical protein LgYCL010c" ytypr087w - 99,0,0,0 "null" "questionable ORF" ytymr122c - 99,0,0,0 "null" "hypothetical protein" ytykl111c - 99,0,0,0 "null" "questionable ORF" ytynl171c - 99,0,0,0 "null" "questionable ORF" ytyjl059w - 98,0,0,0 "YHC3" "may function as a chaperone, similarity to human Batten disease-related protein CLN3" ytyir040c - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytyhr149c - 99,0,0,0 "null" "similarity to hypothetical protein YGR221c" ytylr326w - 99,0,0,0 "null" "hypothetical protein" ytygr018c - 99,0,0,0 "null" "questionable ORF" ytypl261c - 99,0,0,0 "null" "questionable ORF" ytypr089w - 99,0,0,0 "null" "questionable ORF" ytybr232c - 99,0,0,0 "null" "questionable ORF" ytyml107c - 99,0,0,0 "null" "hypothetical protein" ytyil024c - 99,0,0,0 "null" "hypothetical protein" ytymr193c-a - 99,0,0,0 "null" "questionable ORF" ytyir042c - 99,0,0,0 "null" "weak similarity to B.licheniformi hypothetical protein P20" ytyol037c - 99,0,0,0 "null" "questionable ORF" ytyml108w - 99,0,0,0 "null" "hypothetical protein" ytygr114c - 99,0,0,0 "null" "questionable ORF" ytyel008w - 99,0,0,0 "null" "hypothetical protein" ytykl115c - 99,0,0,0 "null" "questionable ORF" ytygr115c - 99,0,0,0 "null" "questionable ORF" ytybr074w - 99,0,0,0 "null" "weak similarity to aminopeptidase Y" ytylr169w - 99,0,0,0 "null" "questionable ORF" ytyor055w - 99,0,0,0 "null" "questionable ORF" ytydr229w - 99,0,0,0 "null" "similarity to hypothetical protein N. crassa" ytykl050c - 99,0,0,0 "null" "similarity to YMR031c" ytylr424w - 99,0,0,0 "null" "weak similarity to STU1P" ytybr075w - 99,0,0,0 "null" "weak similarity to hypothetical protein S. pombe" ytypr014c - 99,0,0,0 "null" "hypothetical protein" ytylr265c - 99,0,0,0 "NEJ1" "hypothetical protein" ytycr033w - 99,0,0,0 "null" "similarity to nuclear receptor co-repressor N-Cor" ytyil122w - 99,0,0,0 "null" "weak similarity to transcription adaptor protein p300 - human" ytygr051c - 99,0,0,0 "null" "questionable ORF" ytylr425w - 99,0,0,0 "TUS1" "similarity to GDP-GTP exchange factors" ytygr117c - 99,0,0,0 "null" "hypothetical protein" ytybl059w - 99,0,0,0 "null" "weak similarity to hypothetical protein YER093c-a" ytyhr182w - 99,0,0,0 "null" "weak similarity to PIR:S58162 probable Rho GTPase protein S. pombe" ytydl242w - 99,0,0,0 "null" "strong similarity to hypothetical protein YPR079w" ytydr326c - 99,0,0,0 "null" "strong similarity to YHR080c, similarity to YFL042c and YLR072w" ytykl052c - 99,0,0,0 "ASK1" "similarity to hypothetical protein S.pombe" ytylr361c - 99,0,0,0 "null" "similarity to YOR3329c" ytyml047c - 99,0,0,0 "PRM6" "strong similarity to YJR054w" ytykl118w - 99,0,0,0 "null" "questionable ORF" ytylr427w - 99,0,0,0 "null" "weak similarity to human transcription regulator Staf-5" ytynl179c - 99,0,0,0 "null" "hypothetical protein" ytydr327w - 99,0,0,0 "null" "questionable ORF" ytylr428c - 99,0,0,0 "null" "questionable ORF" ytypr112c - 98,0,0,0 "MRD1" "similarity to RNA-binding proteins" ytymr320w - 99,0,0,0 "null" "hypothetical protein" ytyol138c - 99,0,0,0 "null" "weak similarity to hypothetical trp-asp repeats containing protein S. pombe" ytynl275w - 98,0,0,0 "null" "similarity to human band 3 anion transport protein" ytynr024w - 99,0,0,0 "null" "weak similarity to RPC31P" ytygr150c - 99,0,0,0 "null" "similarity to PIR:T39838 hypothetical protein SPBC19G7.07c S. pombe" ytynl276c - 99,0,0,0 "null" "questionable ORF" ytyel044w - 99,0,0,0 "IES6" "similarity to SPAC222.04c hypothetical protein S. pombe" ytygr151c - 99,0,0,0 "null" "questionable ORF" ytymr068w - 99,0,0,0 "null" "weak similarity to mouse transcription factor NF-kappaB" ytyer128w - 99,0,0,0 "null" "hypothetical protein" ytybl094c - 99,0,0,0 "null" "questionable ORF" ytycl051w - 98,0,0,0 "LRE1" "involved in laminarinase resistance" ytykr075c - 99,0,0,0 "null" "weak similarity to negative regulator REG1P" ytymr324c - 99,0,0,0 "null" "strong similarity to YBL108w, YCR103c and YKL223w" ytydr360w - 99,0,0,0 "null" "questionable ORF" ytypr050c - 99,0,0,0 "null" "questionable ORF" ytypl033c - 99,0,0,0 "null" "weak similarity to YLR426w" ytyor093c - 99,0,0,0 "null" "similarity to S.pombe hypothetical protein SPAC22F3.04" ytygl230c - 99,0,0,0 "null" "hypothetical protein" ytyar047c - 99,0,0,0 "null" "hypothetical protein" ytykl059c - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein" ytybl095w - 99,0,0,0 "null" "similarity to C.albicans hypothetical protein" ytylr033w - 99,0,0,0 "RSC58" "hypothetical protein" ytykl153w - 99,0,0,0 "null" "questionable ORF" ytybl096c - 99,0,0,0 "null" "questionable ORF" ytynl279w - 99,0,0,0 "PRM1" "similarity to S. pombe coiled-coil protein of unknown function" ytyel048c - 99,0,0,0 "null" "weak similarity to trp-asp repeat protein - S. pombe" ytygr219w - 99,0,0,0 "null" "questionable ORF" ytyjl022w - 99,0,0,0 "null" "questionable ORF" ytydr428c - 99,0,0,0 "null" "weak similarity to predicted esterase of proteobacterium" ytydl011c - 99,0,0,0 "null" "questionable ORF" ytylr462w - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytymr135w-a - 99,0,0,0 "null" "questionable ORF" ytygr154c - 99,0,0,0 "null" "strong similarity to hypothetical proteins YKR076w and YMR251w" ytymr326c - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytyml083c - 99,0,0,0 "null" "hypothetical protein" ytylr463c - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytykl155c - 99,0,0,0 "RSM22" "similarity to S. pombe SPAC1420.04c putative cytochrome c oxidase assembly protein" ytynl041c - 99,0,0,0 "TFI2" "weak similarity to MLP1" ytydr269c - 99,0,0,0 "null" "questionable ORF" ytygl072c - 99,0,0,0 "null" "questionable ORF" ytyor255w - 99,0,0,0 "null" "hypothetical protein" ytyol078w - 99,0,0,0 "null" "similarity to stress activated MAP kinase interacting protein S. pombe" ytygl232w - 99,0,0,0 "null" "weak similarity to P.falciparum dihydropteroate synthase" ytydl186w - 99,0,0,0 "null" "hypothetical protein" ytybr007c - 99,0,0,0 "null" "hypothetical protein" ytydr524c - 99,0,0,0 "AGE1" "similarity to ADP-ribosylation factor (ARF) GTPase activating protein (GAP) with effector functions" ytykr078w - 99,0,0,0 "null" "similarity to VPS5P" ytylr036c - 99,0,0,0 "null" "similarity to YIL089w" ytydl187c - 99,0,0,0 "null" "questionable ORF" ytyil161w - 99,0,0,0 "null" "hypothetical protein" ytylr464w - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytykl090w - 99,0,0,0 "null" "hypothetical protein" ytylr465c - 99,0,0,0 "null" "questionable ORF" ytygl139w - 99,0,0,0 "null" "strong similarity to hypothetical protein YPL221w" ytynl203c - 99,0,0,0 "null" "weak similarity to B.subtilis CDP-diacylglycerol--serine O-phosphatidyltransferase" ytyjr108w - 99,0,0,0 "ABM1" "similarity to hypothetical protein YIL014c-a" ytygl074c - 99,0,0,0 "null" "questionable ORF" ytyil163c - 99,0,0,0 "null" "questionable ORF" ytybr277c - 99,0,0,0 "null" "questionable ORF" ytygr251w - 99,0,0,0 "null" "hypothetical protein" ytyjl120w - 99,0,0,0 "null" "questionable ORF" ytydr526c - 99,0,0,0 "null" "questionable ORF" ytynl109w - 99,0,0,0 "null" "weak similarity to cytochrome-c oxidase" ytycl058c - 99,0,0,0 "FYV5" "hypothetical protein" ytyor353c - 99,0,0,0 "null" "weak similarity to adenylate cyclases" ytykl158w - 99,0,0,0 "null" "hypothetical protein" ytygl235w - 99,0,0,0 "null" "questionable ORF" ytydl189w - 99,0,0,0 "null" "weak similarity to 'KIAA1002'; H. sapiens" ytydl016c - 99,0,0,0 "null" "questionable ORF" ytynr062c - 99,0,0,0 "null" "weak similarity to H.influenzae L-lactate permease (lctP) homolog" ytyal064w - 99,0,0,0 "null" "hypothetical protein" ytygr093w - 99,0,0,0 "null" "similarity to hypothetical S.pombe protein" ytyal065c - 98,0,0,0 "null" "strong similarity to FLO1P and FLO9P - putative pseudogene" ytynl140c - 99,0,0,0 "null" "questionable ORF" ytyjl028w - 99,0,0,0 "null" "hypothetical protein" ytyjl123c - 99,0,0,0 "null" "weak similarity to D.melanogaster troponin T and human nucleolin" ytypr152c - 99,0,0,0 "null" "weak similarity to hypothetical protein CG3542 D. melanogaster" ytyhr212c - 99,0,0,0 "null" "identical to hypothetical protein YAR060c" ytynl047c - 99,0,0,0 "null" "similarity to probable transcription factor ASK10P and hypothetical protein YPR115w, and strong similarity to hypothetical protein YIL105c" ytylr135w - 99,0,0,0 "SLX4" "subunit of SLX1P/Ybr228p-SLX4P complex, required for cell growth in the absence of SGS1 or TOP3" ytyal066w - 99,0,0,0 "null" "weak similarity to membrane protein yybF - Bacillus subtilis" ytynl207w - 99,0,0,0 "null" "similarity to M.jannaschii hypothetical protein MJ1073" ytypr059c - 99,0,0,0 "null" "questionable ORF" ytydl113c - 99,0,0,0 "null" "similarity to hypothetical protein YDR425w" ytygr190c - 99,0,0,0 "null" "questionable ORF" ytykr005c - 99,0,0,0 "null" "hypothetical protein" ytylr230w - 99,0,0,0 "null" "questionable ORF" ytypl136w - 99,0,0,0 "null" "questionable ORF" ytyhr213w - 99,0,0,0 "null" "strong similarity to FLO5P, FLO1P, FLO9P - putative pseudogene" ytypl137c - 99,0,0,0 "null" "similarity to microtubule-interacting protein MHP1P and to hypothetical protein YOR227w" ytyhl037c - 99,0,0,0 "null" "hypothetical protein" ytykl097c - 99,0,0,0 "null" "hypothetical protein" ytylr137w - 99,0,0,0 "null" "weak similarity to hypothetical S.pombe protein SPCC4G3" ytyhr214w - 99,0,0,0 "null" "similarity to Sta1, identical to YAR066w, strong imilarity to YIL169c, YOL155c" ytygl174w - 99,0,0,0 "BUD13" "weak similarity to C.elegans hypothetical protein R08D7.1" ytylr232w - 99,0,0,0 "null" "questionable ORF" ytylr072w - 99,0,0,0 "null" "similarity to YFL042c, YDR326c and YHR080c" ytypl073c - 99,0,0,0 "null" "questionable ORF" ytykl098w - 99,0,0,0 "null" "weak similarity to cellulase (EC 3.2.1.4) - Clostridium sp." ytykr007w - 99,0,0,0 "null" "weak similarity to Streptococcus protein M5 precursor" ytydl050c - 99,0,0,0 "null" "questionable ORF" ytypl233w - 99,0,0,0 "null" "weak similarity to hypothetical protein S. pombe" ytyml013w - 99,0,0,0 "null" "hypothetical protein" ytygr259c - 99,0,0,0 "null" "questionable ORF" ytyhr150w - 99,0,0,0 "null" "weak similarity to YDR479c" ytyor199w - 99,0,0,0 "null" "questionable ORF" ytyhr151c - 99,0,0,0 "null" "hypothetical protein" ytydl211c - 99,0,0,0 "null" "similarity to hypothetical protein YNL176c" ytybr300c - 99,0,0,0 "null" "strong similarity to hypothetical protein YGR293c" ytylr235c - 99,0,0,0 "null" "questionable ORF" ytygl177w - 99,0,0,0 "null" "questionable ORF" ytyjr146w - 99,0,0,0 "null" "questionable ORF" ytyfl046w - 99,0,0,0 "null" "weak similarity to middle part of C.elegans myosin heavy chain A" ytybr141c - 99,0,0,0 "null" "similarity to hypothetical protein S. pombe" ytyhr218w - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytykl195w - 99,0,0,0 "null" "similarity to rabbit histidine-rich calcium-binding protein" ytylr236c - 99,0,0,0 "null" "hypothetical protein" ytydl118w - 99,0,0,0 "null" "questionable ORF" ytyll059c - 99,0,0,0 "null" "hypothetical protein" ytyjl064w - 99,0,0,0 "null" "hypothetical protein" ytydr136c - 99,0,0,0 "null" "questionable ORF" ytygr022c - 99,0,0,0 "null" "questionable ORF" ytyjl225c - 99,0,0,0 "null" "strong similarity to members of the SIR1P/TIP1P family" ytyel010w - 99,0,0,0 "null" "hypothetical protein" ytyjr082c - 99,0,0,0 "null" "hypothetical protein" ytybr047w - 99,0,0,0 "null" "hypothetical protein" ytymr034c - 99,0,0,0 "null" "weak similarity to YPR201w" ytyhr059w - 99,0,0,0 "FYV4" "weak similarity to Ustilago hordei B east mating protein 2" ytydl214c - 98,0,0,0 "PRR2" "strong similarity to putative protein kinase NPR1" ytykr040c - 99,0,0,0 "null" "questionable ORF" ytygr291c - 99,0,0,0 "null" "hypothetical protein" ytylr171w - 99,0,0,0 "null" "questionable ORF" ytyjr083c - 99,0,0,0 "null" "hypothetical protein" ytylr077w - 99,0,0,0 "null" "weak similarity to Xenopus RCC1 protein" ytykl023w - 99,0,0,0 "null" "weak similarity to human cylicin II" ytyol041c - 99,0,0,0 "NOP12" "weak similarity to M.sativa NUM1, hnRNP protein from C. tentans and D. melanogaster, murine/bovine poly(A) binding protein II, and NSR1P" ytybl060w - 99,0,0,0 "null" "weak similarity to probable guanine nucleotide exchange factor, S.pombe" ytyfl049w - 99,0,0,0 "null" "weak similarity to NPL6P" ytybr209w - 99,0,0,0 "null" "hypothetical protein" ytycr007c - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytykr041w - 99,0,0,0 "null" "hypothetical protein" ytypr096c - 99,0,0,0 "null" "hypothetical protein" ytymr130w - 99,0,0,0 "null" "similarity to D.melanogaster Dreg-2 protein" ytydl216c - 99,0,0,0 "RRI1" "similarity to Jun activation domain binding protein homologue of A. thaliana" ytyjl067w - 99,0,0,0 "null" "questionable ORF" ytygr293c - 99,0,0,0 "null" "strong similarity to hypothetical protein YBR300c" ytyjl162c - 99,0,0,0 "null" "weak similarity to dnaJ proteins" ytylr173w - 99,0,0,0 "null" "hypothetical protein" ytylr334c - 99,0,0,0 "null" "questionable ORF" ytydl151c - 99,0,0,0 "FYV3" "questionable ORF" ytygr025w - 99,0,0,0 "null" "questionable ORF" ytyar014c - 99,0,0,0 "BUD14" "similarity to hypothetical protein S.pombe" ytybl062w - 99,0,0,0 "null" "questionable ORF" ytypr097w - 99,0,0,0 "null" "similarity to hypothetical protein SPCC1450.12 S. pombe" ytyil032c - 99,0,0,0 "null" "hypothetical protein" ytykr044w - 99,0,0,0 "null" "hypothetical protein" ytyml050w - 99,0,0,0 "null" "weak similarity to potato sucrose cleavage protein" ytyjr087w - 99,0,0,0 "null" "questionable ORF" ytyjr088c - 99,0,0,0 "null" "weak similarity to S.pombe hypothetical protein SPBC14C8.18c" ytyhr159w - 99,0,0,0 "null" "hypothetical protein" ytydl219w - 99,0,0,0 "null" "strong similarity to S.equisimilis hypothetical protein" ytymr134w - 99,0,0,0 "null" "hypothetical protein" ytybl065w - 99,0,0,0 "null" "questionable ORF" ytynl089c - 99,0,0,0 "null" "questionable ORF" ytypl272c - 99,0,0,0 "null" "hypothetical protein" ytypr195c - 99,0,0,0 "null" "hypothetical protein" ytyar018c - 98,0,0,0 "KIN3" "ser/thr protein kinase" ytyml118w - 99,0,0,0 "NGL3" "similarity to YMR285c" ytydr078c - 99,0,0,0 "null" "hypothetical protein" ytylr338w - 99,0,0,0 "KRE21" "questionable ORF" ytyml053c - 99,0,0,0 "null" "hypothetical protein" ytyel018w - 99,0,0,0 "null" "weak similarity to RAD50P" ytyhr095w - 99,0,0,0 "null" "hypothetical protein" ytykr047w - 99,0,0,0 "null" "questionable ORF" ytycr041w - 99,0,0,0 "null" "questionable ORF" ytygl042c - 99,0,0,0 "null" "questionable ORF" ytypl005w - 99,0,0,0 "null" "weak similarity to NUP2P" ytyjr011c - 99,0,0,0 "null" "hypothetical protein" ytylr434c - 99,0,0,0 "null" "questionable ORF" ytypr197c - 99,0,0,0 "null" "questionable ORF" ytydl156w - 99,0,0,0 "null" "weak similarity to Pas7p" ytyal031c - 99,0,0,0 "FUN21" "hypothetical protein" ytyjr012c - 99,0,0,0 "null" "weak similarity to hypothetical protein B17C10.80 N. crassa" ytylr101c - 99,0,0,0 "null" "questionable ORF" ytygl109w - 99,0,0,0 "null" "questionable ORF" ytygr221c - 99,0,0,0 "TOS2" "similarity to hypothetical protein YHR149c" ytyjl169w - 99,0,0,0 "null" "questionable ORF" ytypl102c - 99,0,0,0 "KRE24" "questionable ORF" ytylr007w - 99,0,0,0 "null" "hypothetical protein" ytykl061w - 99,0,0,0 "null" "hypothetical protein" ytynl187w - 99,0,0,0 "null" "hypothetical protein" ytyjr013w - 99,0,0,0 "null" "similarity to C.elegans B0491.1 protein" ytymr233w - 99,0,0,0 "null" "strong similarity to YOR295w" ytypl103c - 99,0,0,0 "null" "similarity to hypothetical M. tuberculosis protein" ytypl277c - 99,0,0,0 "null" "strong similarity to hypothetical protein YOR389w/putative pseudogene" ytygl140c - 99,0,0,0 "null" "weak similarity to Lactobacillus putative histidine protein kinase SppK" ytykl063c - 99,0,0,0 "null" "weak similarity to mammalian microtubule-associated protein MAP 1B" ytydr431w - 99,0,0,0 "null" "questionable ORF" ytykl223w - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytypr027c - 99,0,0,0 "null" "similarity to YNL019c and YNL033w" ytyor324c - 99,0,0,0 "null" "similarity to YAL028w" ytyer135c - 99,0,0,0 "null" "hypothetical protein" ytykl224c - 99,0,0,0 "null" "strong similarity to members of the SRP1P/TIP1P family" ytymr075w - 99,0,0,0 "null" "weak similarity to human Mi-2 protein" ytyml059c - 99,0,0,0 "null" "similarity to C.elegans ZK370.4 protein" ytygr064w - 99,0,0,0 "null" "questionable ORF" ytyhl005c - 99,0,0,0 "null" "hypothetical protein" ytydl096c - 99,0,0,0 "null" "questionable ORF" ytydr179c - 99,0,0,0 "null" "weak similarity to hypothetical protein D. melanogaster" ytybr184w - 99,0,0,0 "null" "hypothetical protein" ytyjr111c - 99,0,0,0 "null" "weak similarity to E.coli colanic acid biosynthesis positive regulator RcsB" ytynl017c - 99,0,0,0 "null" "hypothetical protein" ytyor325w - 99,0,0,0 "null" "questionable ORF" ytyar053w - 99,0,0,0 "null" "hypothetical protein" ytydr273w - 99,0,0,0 "null" "weak similarity to YOR042w" ytykl225w - 99,0,0,0 "null" "strong similarity to GIN11P, YKL225w and other subtelomeric encoded proteins" ytylr374c - 99,0,0,0 "null" "questionable ORF" ytyer071c - 99,0,0,0 "null" "hypothetical protein" ytynl285w - 99,0,0,0 "null" "hypothetical protein" ytylr106c - 99,0,0,0 "null" "similarity to Kaposi's sarcoma-associated herpes-like virus ORF73 homolog gene" ytyer137c - 99,0,0,0 "null" "weak similarity to Mycoplasma hominis P120 protein" ytydr274c - 99,0,0,0 "null" "hypothetical protein" ytykr083c - 99,0,0,0 "DAD2" "weak similarity to S.japonicum paramyosin" ytygr226c - 99,0,0,0 "null" "hypothetical protein" ytypl041c - 99,0,0,0 "null" "hypothetical protein" ytycr049c - 99,0,0,0 "null" "questionable ORF" ytybr012c - 99,0,0,0 "null" "hypothetical protein" ytyal037w - 99,0,0,0 "null" "strong similarity to GTP-binding proteins" ytyel055c - 98,0,0,0 "POL5" "DNA polymerase V" ytymr172w - 99,0,0,0 "HOT1" "similarity to MSN1 protein" ytyfl012w - 99,0,0,0 "null" "hypothetical protein" ytyjr018w - 99,0,0,0 "null" "questionable ORF" ytycl061c - 99,0,0,0 "MRC1" "similarity to URK1" ytylr041w - 99,0,0,0 "null" "questionable ORF" ytynl019c - 99,0,0,0 "null" "strong similarity to YNL033w" ytydr370c - 99,0,0,0 "null" "hypothetical protein" ytyer139c - 99,0,0,0 "null" "similarity to hypothetical protein YDR066c" ytydr102c - 99,0,0,0 "null" "hypothetical protein" ytydr008c - 99,0,0,0 "null" "questionable ORF" ytypl108w - 99,0,0,0 "null" "hypothetical protein" ytygr068c - 99,0,0,0 "null" "weak similarity to ROD1P" ytydl099w - 99,0,0,0 "null" "weak similarity to myosin heavy chain proteins" ytygr228w - 99,0,0,0 "null" "questionable ORF" ytyjr114w - 99,0,0,0 "null" "questionable ORF" ytygl146c - 99,0,0,0 "null" "hypothetical protein" ytydr437w - 99,0,0,0 "null" "weak similarity to DSCR5b H. sapiens" ytypl044c - 99,0,0,0 "null" "questionable ORF" ytykl069w - 99,0,0,0 "null" "strong similarity to hypothetical E.coli protein b1832" ytykr087c - 99,0,0,0 "null" "similarity to hypothetical Myxococcus xanthus protein" ytyhr121w - 99,0,0,0 "null" "weak similarity to C.elegans hypothetical protein" ytygr164w - 99,0,0,0 "null" "questionable ORF" ytylr379w - 99,0,0,0 "null" "questionable ORF" ytydr200c - 99,0,0,0 "null" "similarity to hypothetical protein YLR238w" ytyer077c - 99,0,0,0 "null" "hypothetical protein" ytyhr029c - 99,0,0,0 "null" "similarity to S.lincolnensis lmbX protein" ytykr089c - 99,0,0,0 "null" "strong similarity to YOR081c" ytylr140w - 99,0,0,0 "null" "questionable ORF" ytypl141c - 99,0,0,0 "null" "strong similarity to protein kinase KIN4P" ytyfr035c - 99,0,0,0 "null" "hypothetical protein" ytygl149w - 99,0,0,0 "null" "questionable ORF" ytylr047c - 99,0,0,0 "null" "similarity to hypothetical protein YGL160w" ytymr178w - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein" ytylr302c - 99,0,0,0 "null" "questionable ORF" ytyor268c - 99,0,0,0 "null" "hypothetical protein" ytydr042c - 99,0,0,0 "null" "hypothetical protein" ytybr113w - 99,0,0,0 "null" "questionable ORF" ytygr168c - 99,0,0,0 "null" "hypothetical protein" ytyhl042w - 99,0,0,0 "null" "similarity to subtelomeric encoded proteins" ytyhr125w - 99,0,0,0 "null" "questionable ORF" ytydr537c - 99,0,0,0 "null" "questionable ORF" ytyhr126c - 99,0,0,0 "null" "hypothetical protein" ytycr085w - 99,0,0,0 "null" "hypothetical protein" ytybl031w - 99,0,0,0 "SHE1" "hypothetical protein" ytykl169c - 99,0,0,0 "null" "questionable ORF" ytydr109c - 99,0,0,0 "null" "similarity to MPA43P" ytynl215w - 99,0,0,0 "IES2" "similarity to hypothetical S. pombe protein" ytydl026w - 99,0,0,0 "null" "questionable ORF" ytydl121c - 99,0,0,0 "null" "hypothetical protein" ytyil175w - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytymr007w - 99,0,0,0 "null" "hypothetical protein" ytyor364w - 99,0,0,0 "null" "hypothetical protein" ytymr102c - 99,0,0,0 "null" "strong similarity to YKL121w" ytyjr056c - 99,0,0,0 "null" "hypothetical protein" ytyfr039c - 99,0,0,0 "null" "similarity to hypothetical protein YGL228w" ytyor365c - 99,0,0,0 "null" "strong similarity to YAL053w" ytymr103c - 99,0,0,0 "null" "hypothetical protein" ytyir020c - 99,0,0,0 "null" "hypothetical protein" ytyhl045w - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytypl146c - 99,0,0,0 "null" "weak similarity to myosin heavy chain proteins" ytyll063c - 99,0,0,0 "AYT1" "strong similarity to Gibberella zeae trichothecene 3-O-acetyltransferase" ytynl057w - 99,0,0,0 "null" "questionable ORF" ytyml020w - 99,0,0,0 "null" "hypothetical protein" ytylr400w - 99,0,0,0 "null" "hypothetical protein" ytykr015c - 99,0,0,0 "null" "similarity to hypothetical protein YJL043w" ytybr051w - 99,0,0,0 "null" "questionable ORF" ytymr086c-a - 99,0,0,0 "null" "questionable ORF" ytydr475c - 99,0,0,0 "null" "weak similarity to N-terminal region of YOR019w" ytypr164w - 98,0,0,0 "KIM3" "drug resistance" ytybl036c - 99,0,0,0 "null" "strong similarity to C.elegans hypothetical protein" ytylr082c - 99,0,0,0 "SRL2" "weak similarity to phospholipase C" ytylr402w - 99,0,0,0 "null" "hypothetical protein" ytynr077c - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytyll065w - 99,0,0,0 "GIN11" "strong similarity to YJR162c, YNR077c, YKL225w and other subtelomeric encoded proteins" ytyml023c - 99,0,0,0 "null" "weak similarity to NMD2P" ytyjr154w - 99,0,0,0 "null" "similarity to FUM9 Gibberella moniliformis fumonisin biosynthetic gene cluster" ytymr040w - 99,0,0,0 "null" "strong similarity to YET1P" ytyil100w - 99,0,0,0 "null" "similarity to mouse Gcap1 protein and fruit fly Bkm-like sex-determining region hypothetical protein CS314" ytyjl072c - 99,0,0,0 "null" "similarity to PIR:T40665 hypothetical protein SPBC725.13c S. pombe" ytydl060w - 99,0,0,0 "TSR1" "similarity to C.elegans hypothetical protein" ytylr084c - 99,0,0,0 "RAX2" "weak similarity to PST1P" ytygr269w - 99,0,0,0 "null" "questionable ORF" ytydl221w - 99,0,0,0 "null" "questionable ORF" ytyil102c - 99,0,0,0 "null" "strong similarity to YIL014c-a" ytyol114c - 99,0,0,0 "null" "similarity to human DS-1 protein" ytyir025w - 99,0,0,0 "MND2" "hypothetical protein" ytygl015c - 99,0,0,0 "null" "hypothetical protein" ytymr204c - 99,0,0,0 "null" "weak similarity to D.melanogaster hypothetical protein DMC39E1" ytycr015c - 99,0,0,0 "null" "hypothetical protein" ytylr181c - 99,0,0,0 "null" "hypothetical protein" ytydl129w - 99,0,0,0 "null" "hypothetical protein" ytyol050c - 99,0,0,0 "null" "questionable ORF" ytylr087c - 99,0,0,0 "CSF1" "weak similarity to hypothetical protein D. melanogaster" ytygl110c - 99,0,0,0 "null" "similarity to hypothetical protein SPCC1906.02c S. pombe" ytypl181w - 99,0,0,0 "null" "weak similarity to YKR029c" ytymr044w - 99,0,0,0 "IOC4" "weak similarity to S. pombe SPBC29A3.13 and CRN1 Coronin-like protein" ytyer104w - 98,0,0,0 "RTT105" "disruption causes increase in Ty1 retrotransposition" ytydr241w - 99,0,0,0 "BUD26" "questionable ORF" ytykl033w - 99,0,0,0 "null" "similarity to hypothetical protein S. pombe" ytynl253w - 99,0,0,0 "null" "similarity to hypothetical protein C. elegans" ytynl319w - 99,0,0,0 "null" "questionable ORF" ytynl254c - 99,0,0,0 "null" "hypothetical protein" ytykr051w - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein" ytypl249c - 99,0,0,0 "GYP5" "similarity to mouse Tbc1 protein" ytyel023c - 99,0,0,0 "null" "similarity to hypothetical protein PA2063 - Pseudomonas aeruginosa" ytyol118c - 99,0,0,0 "null" "hypothetical protein" ytymr206w - 99,0,0,0 "null" "weak similarity to hypothetical protein YNR014w" ytynl095c - 99,0,0,0 "null" "strong similarity to YOR092w" ytymr052c-a - 99,0,0,0 "null" "questionable ORF" ytynr004w - 99,0,0,0 "null" "weak similarity to bovine interferon gamma precursor" ytybr155w - 99,0,0,0 "CNS1" "weak similarity to stress-induced STI1P" ytyer041w - 99,0,0,0 "YEN1" "weak similarity to DNA repair protein RAD2P and Dsh1p" ytygl113w - 99,0,0,0 "SLD3" "weak similarity to YOR165w" ytyel025c - 99,0,0,0 "SRI1" "hypothetical protein" ytymr048w - 99,0,0,0 "CSM3" "weak similarity to unnamed ORF; Homo sapiens cDNA" ytylr440c - 99,0,0,0 "null" "hypothetical protein" ytyol054w - 99,0,0,0 "null" "weak similarity to transcription factors" ytymr209c - 99,0,0,0 "null" "similarity to conserved hypothetical protein S. pombe" ytyhr168w - 98,0,0,0 "null" "similarity to GTP-binding proteins" ytykl037w - 99,0,0,0 "null" "weak similarity to C.elegans ubc-2 protein" ytydl068w - 99,0,0,0 "null" "questionable ORF" ytyjr098c - 99,0,0,0 "null" "weak similarity to Bacillus licheniformis esterase" ytydl163w - 99,0,0,0 "null" "questionable ORF" ytylr281c - 98,0,0,0 "null" "similarity to polypeptide chain release factors" ytyjl175w - 99,0,0,0 "null" "questionable ORF" ytyor139c - 99,0,0,0 "null" "questionable ORF" ytymr144w - 99,0,0,0 "null" "weak similarity to MLP1P" ytycr050c - 99,0,0,0 "null" "questionable ORF" ytydr501w - 98,0,0,0 "PLM2" "PLasmid Maintenance mutant shows 2mu-m plasmid instability" ytylr187w - 99,0,0,0 "null" "similarity to hypothetical protein YNL278w" ytylr282c - 99,0,0,0 "null" "questionable ORF" ytygl050w - 99,0,0,0 "null" "similarity to hypothetical protein SPAC25B8.15c S. pombe" ytyel028w - 99,0,0,0 "null" "hypothetical protein" ytygr134w - 99,0,0,0 "CAF130" "hypothetical protein" ytyjr020w - 99,0,0,0 "null" "questionable ORF" ytyjl003w - 99,0,0,0 "null" "weak similarity to hypothetical protein SPAC1486.08 S. pombe" ytylr283w - 99,0,0,0 "null" "weak similarity to SMC2P" ytybr094w - 99,0,0,0 "null" "weak similarity to pig tubulin-tyrosine ligase" ytylr015w - 99,0,0,0 "BRE2" "weak similarity to S.pombe hypothetical protein SPBC13G1" ytybr095c - 99,0,0,0 "null" "weak similarity to hypothetical protein S. pombe" ytyar029w - 99,0,0,0 "FUN57" "strong similarity to YAR031w, YGL053w, FUN55P, FUN59P and YGL051w" ytygl052w - 99,0,0,0 "null" "questionable ORF" ytyhl010c - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein, homolog to human breast cancer-associated protein BRAP2" ytydr010c - 99,0,0,0 "null" "hypothetical protein" ytymr147w - 99,0,0,0 "null" "hypothetical protein" ytybr255w - 99,0,0,0 "null" "hypothetical protein" ytyor170w - 99,0,0,0 "null" "questionable ORF" ytylr111w - 99,0,0,0 "null" "hypothetical protein" ytycr054c - 99,0,0,0 "CTR86" "weak similarity to THR4P" ytyml066c - 99,0,0,0 "SMA2" "hypothetical protein" ytygl214w - 99,0,0,0 "null" "questionable ORF" ytykl137w - 99,0,0,0 "null" "weak similarity to hypothetical protein F1N13_200 - A. thaliana" ytyjl100w - 99,0,0,0 "LSB6" "similarity to hypothetical C. elegans protein C56A3.8" ytyar060c - 99,0,0,0 "null" "identical to hypothetical protein YHR212c" ytynl198c - 99,0,0,0 "null" "questionable ORF" ytyjl007c - 99,0,0,0 "null" "hypothetical protein" ytyll030c - 99,0,0,0 "null" "hypothetical protein" ytylr287c - 99,0,0,0 "null" "weak similarity to S.pombe hypothetical protein SPAC22E12" ytyhl013c - 99,0,0,0 "null" "similarity to C.elegans hypothetical protein F21D5.2" ytylr381w - 99,0,0,0 "null" "hypothetical protein" ytyar061w - 98,0,0,0 "null" "strong similarity to N-terminus of FLO1P - putative pseudogene" ytylr114c - 99,0,0,0 "EFR4" "similarity to C.elegans hypothetical protein and YOR054c" ytynr042w - 99,0,0,0 "null" "hypothetical protein" ytyhl014c - 99,0,0,0 "YLF2" "similarity to E.coli GTP-binding protein" ytygl217c - 99,0,0,0 "null" "questionable ORF" ytypl114w - 99,0,0,0 "null" "questionable ORF" ytybr259w - 99,0,0,0 "null" "weak similarity to 'BH1924', sugar transport system; Bacillus halodurans" ytydr442w - 99,0,0,0 "null" "questionable ORF" ytyar062w - 98,0,0,0 "null" "strong similarity to FLO1P - putative pseudogene" ytyll032c - 99,0,0,0 "null" "similarity to hypothetical protein SPAC9B6.13 S. pombe" ytyjr120w - 99,0,0,0 "null" "hypothetical protein" ytydr015c - 99,0,0,0 "null" "hypothetical protein" ytyjl009w - 99,0,0,0 "null" "questionable ORF" ytypr038w - 99,0,0,0 "null" "questionable ORF" ytydr509w - 99,0,0,0 "null" "questionable ORF" ytynl295w - 99,0,0,0 "null" "hypothetical protein" ytygl218w - 99,0,0,0 "null" "questionable ORF" ytyer147c - 99,0,0,0 "SCC4" "protein required for sister chromatid cohesion" ytyjl104w - 99,0,0,0 "MIA1" "weak similarity to C.elegans hypothetical protein F45G2.c" ytykl076c - 99,0,0,0 "null" "questionable ORF" ytygr236c - 99,0,0,0 "SPG1" "hypothetical protein" ytybl004w - 99,0,0,0 "null" "weak similarity to Papaya ringspot virus polyprotein" ytyll033w - 99,0,0,0 "null" "hypothetical protein" ytypr039w - 99,0,0,0 "null" "questionable ORF" ytylr211c - 99,0,0,0 "null" "hypothetical protein" ytylr385c - 99,0,0,0 "null" "hypothetical protein" ytylr051c - 99,0,0,0 "null" "similarity to human acidic 82 kDa protein" ytynl296w - 99,0,0,0 "KRE25" "questionable ORF" ytyll034c - 98,0,0,0 "null" "similarity to mammalian valosin" ytydr179w-a - 99,0,0,0 "null" "hypothetical protein" ytyjl105w - 99,0,0,0 "null" "similarity to hypothetical protein YKR029c" ytybl100c - 99,0,0,0 "null" "questionable ORF" ytykl171w - 98,0,0,0 "null" "weak similarity to ser/thr protein kinase" ytybr197c - 99,0,0,0 "null" "weak similarity to hypothetical protein YPL077c" ytyfl023w - 99,0,0,0 "FYV11" "similarity to repeat structures in a Plasmodium falciparum protein (MESA) that binds human erythrocyte protein 4.1." ytylr386w - 99,0,0,0 "null" "similarity to hypothetical S. pombe protein" ytyjl107c - 99,0,0,0 "null" "similarity to hypothetical S. pombe protein" ytylr052w - 99,0,0,0 "IES3" "hypothetical protein" ytybr292c - 99,0,0,0 "null" "hypothetical protein" ytyfl024c - 99,0,0,0 "EPL1" "weak similarity to YMR164c and GAL11P" ytyhr035w - 99,0,0,0 "null" "weak similarity to human SEC23 protein" ytypr136c - 99,0,0,0 "FYV15" "questionable ORF" ytyhr130c - 99,0,0,0 "null" "weak similarity to T.brucei H+-transporting ATP synthase" ytyel067c - 99,0,0,0 "null" "weak similarity to YKL083w" ytyjl202c - 99,0,0,0 "null" "questionable ORF" ytyjl108c - 99,0,0,0 "PRM10" "strong similarity to hypothetical S. pombe protein" ytyhr036w - 99,0,0,0 "null" "similarity to hypothetical protein YGL247w" ytyel068c - 99,0,0,0 "null" "hypothetical protein" ytydr114c - 99,0,0,0 "null" "questionable ORF" ytymr185w - 99,0,0,0 "null" "similarity to hypothetical protein S. pombe" ytypr071w - 99,0,0,0 "null" "strong similarity to YIL029c" ytyfr043c - 99,0,0,0 "null" "hypothetical protein" ytyar068w - 99,0,0,0 "null" "strong similarity to hypothetical protein YHR214w-a" ytydr383c - 99,0,0,0 "null" "weak similarity to S.pombe paramyosin" ytyll038c - 99,0,0,0 "ENT4" "weak similarity to YJR125c and YDL161w" ytyjl043w - 99,0,0,0 "null" "similarity to hypothetical protein YKR015c" ytyar069c - 99,0,0,0 "null" "hypothetical protein" ytyjl204c - 99,0,0,0 "null" "weak similarity to TOR2P" ytybl104c - 99,0,0,0 "null" "weak similarity to S.pombe hypothetical protein SPAC12G12.01c" ytydl032w - 99,0,0,0 "null" "questionable ORF" ytydr544c - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytybr027c - 99,0,0,0 "null" "hypothetical protein" ytypl150w - 99,0,0,0 "null" "similarity to ser/thr protein kinases" ytygr002c - 99,0,0,0 "null" "similarity to hypothetical S. pombe protein" ytypl151c - 99,0,0,0 "PRP46" "strong similarity to A.thaliana PRL1 and PRL2 proteins" ytyjr128w - 99,0,0,0 "null" "questionable ORF" ytyhr134w - 99,0,0,0 "WSS1" "similarity to S. pombe SPCC1442.07c putative Zn-protease" ytylr057w - 99,0,0,0 "null" "weak similarity to mouse alpha-mannosidase" ytyfr046c - 99,0,0,0 "null" "hypothetical protein" ytykr020w - 99,0,0,0 "null" "hypothetical protein" ytydl034w - 99,0,0,0 "null" "questionable ORF" ytykl177w - 99,0,0,0 "null" "questionable ORF" ytylr218c - 99,0,0,0 "null" "similarity to PIR:T41376 hypothetical protein S. pombe" ytygr003w - 99,0,0,0 "null" "similarity to D.melanogaster lin19 protein" ytymr153c-a - 99,0,0,0 "null" "questionable ORF" ytyjl046w - 99,0,0,0 "null" "similarity to E.coli lipoate-protein ligase A" ytyjl207c - 99,0,0,0 "null" "weak similarity to rat omega-conotoxin-sensitive calcium channel alpha-1 subunit rbB-I" ytycr095c - 99,0,0,0 "null" "similarity to Saccharomyces kluyveri strain NRRL Y-12651" ytypr170c - 99,0,0,0 "null" "hypothetical protein" ytybl107c - 99,0,0,0 "null" "hypothetical protein" ytyfl013w-a - 99,0,0,0 "null" "questionable ORF" ytyor279c - 99,0,0,0 "null" "hypothetical protein" ytykr022c - 99,0,0,0 "null" "hypothetical protein" ytybr124w - 99,0,0,0 "null" "questionable ORF" ytypr076w - 99,0,0,0 "null" "questionable ORF" ytymr111c - 99,0,0,0 "null" "weak similarity to MSN1 protein" ytydr053w - 99,0,0,0 "null" "questionable ORF" ytypr171w - 99,0,0,0 "null" "hypothetical protein" ytykr023w - 99,0,0,0 "null" "similarity to S.pombe hypothetical protein SPAC23C4" ytynl226w - 99,0,0,0 "null" "questionable ORF" ytypr078c - 99,0,0,0 "null" "hypothetical protein" ytyor041c - 99,0,0,0 "null" "questionable ORF" ytydr215c - 99,0,0,0 "null" "hypothetical protein" ytyhr139c-a - 99,0,0,0 "null" "hypothetical protein" ytyjl049w - 99,0,0,0 "null" "similarity to PIR:T39496 hypothetical protein SPBC1604.18c S. pombe" ytyil012w - 99,0,0,0 "null" "hypothetical protein" ytylr315w - 99,0,0,0 "null" "weak similarity to rat apolipoprotein A-IV" ytybl109w - 99,0,0,0 "null" "similarity to subtelomeric encoded proteins" ytyol024w - 99,0,0,0 "null" "hypothetical protein" ytynl161w - 98,0,0,0 "CBK1" "strong similarity to U.maydis Ukc1p protein kinase" ytyjr162c - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytyor376w - 99,0,0,0 "null" "hypothetical protein" ytylr156w - 99,0,0,0 "null" "identical to hypothetical proteins YLR161w and YLR159w" ytynl228w - 99,0,0,0 "null" "questionable ORF" ytydr485c - 99,0,0,0 "null" "similarity to trichohyalin" ytyer188w - 99,0,0,0 "null" "weak similarity to viral RNA replicase" ytybr223c - 99,0,0,0 "null" "hypothetical protein" ytyfl063w - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytymr115w - 99,0,0,0 "null" "similarity to YKL133c" ytynl164c - 99,0,0,0 "null" "hypothetical protein" ytybl046w - 99,0,0,0 "null" "weak similarity to hypothetical protein YOR054c" ytypl253c - 99,0,0,0 "VIK1" "similarity to CIK1P" ytyfl064c - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytyer189w - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytygr278w - 99,0,0,0 "null" "similarity to C.elegans LET-858" ytyor379c - 99,0,0,0 "null" "questionable ORF" ytykl105c - 99,0,0,0 "null" "similarity to YMR086w" ytypr002w - 99,0,0,0 "PDH1" "similarity to B.subtilis mmgE protein" ytyil016w - 98,0,0,0 "SNL1" "high copy suppressor of NUP116, GLE2 and NIC96 alleles" ytyfl065c - 99,0,0,0 "null" "strong similarity to subtelomeric encoded proteins" ytylr159w - 99,0,0,0 "null" "identical to hypothetical proteins YLR161w and YLR156w" ytypr177c - 99,0,0,0 "null" "questionable ORF" ytylr254c - 99,0,0,0 "null" "weak similarity to PIR:T10472 G-box binding protein 2A Sinapis alba" ytylr094c - 99,0,0,0 "GIS3" "hypothetical protein" ytydl231c - 99,0,0,0 "BRE4" "similarity to hypothetical protein SPAC26F1.08c S. pombe" ytynl260c - 99,0,0,0 "null" "weak similarity to hypothetical protein S. pombe" ytydl071c - 99,0,0,0 "null" "questionable ORF" ytycl005w - 99,0,0,0 "null" "strong similarity to Saccharomyces pastorianus hypothetical protein LgYCL005w" ytyol029c - 99,0,0,0 "null" "hypothetical protein" ytyml034w - 99,0,0,0 "SRC1" "similarity to YDR458c" ytyor300w - 99,0,0,0 "null" "questionable ORF" ytykr029c - 99,0,0,0 "null" "similarity to YJL105w and Lentinula MFBA protein" ytymr212c - 99,0,0,0 "EFR3" "weak similarity to myosins, conserved, ubiquitous membrane protein required for cell viability" ytybr226c - 99,0,0,0 "null" "questionable ORF" ytylr415c - 99,0,0,0 "null" "questionable ORF" ytylr255c - 99,0,0,0 "null" "hypothetical protein" ytylr416c - 99,0,0,0 "null" "hypothetical protein" ytypr179c - 99,0,0,0 "PLO1" "similarity to PLO2P, weak similarity to C-terminal region of Nip80p" ytyhr173c - 99,0,0,0 "null" "hypothetical protein" ytyfl067w - 99,0,0,0 "null" "similarity to mouse period clock protein" ytycr025c - 99,0,0,0 "null" "hypothetical protein" ytydl233w - 99,0,0,0 "null" "hypothetical protein" ytyml037c - 99,0,0,0 "null" "hypothetical protein" ytydr316w - 99,0,0,0 "null" "similarity to hypothetical ubiquitin system protein S. pombe" ytydl073w - 99,0,0,0 "null" "weak similarity to Cyprinus carpio calcium channel protein" ytygr042w - 99,0,0,0 "null" "weak similarity to TRCDSEMBL:CH20111_1 Troponin-I; Clupea harengus" ytydl074c - 99,0,0,0 "BRE1" "weak similarity to spindle pole body protein NUF1" ytyor049c - 99,0,0,0 "null" "similarity to YER185w, RTA1P" ytyfl068w - 99,0,0,0 "null" "weak similarity to hypothetical E.coli protein" ytybr228w - 99,0,0,0 "SLX1" "similarity to hypothetical A.thaliana protein" ytycr026c - 99,0,0,0 "null" "similarity to human autotaxin precursor" ytypl192c - 99,0,0,0 "PRM3" "hypothetical protein" ytyml038c - 99,0,0,0 "YMD8" "similarity to vanadate resistance protein GOG5P, member of the triose phosphate translocater family of membrane transporters" ytydr317w - 99,0,0,0 "null" "hypothetical protein" ytyor144c - 99,0,0,0 "EFD1" "weak similarity to human DNA-binding protein PO-GA and to bacterial H+-transporting ATP synthases" ytyjl182c - 99,0,0,0 "null" "questionable ORF" ytygr045c - 99,0,0,0 "null" "questionable ORF" ytylr419w - 98,0,0,0 "null" "similarity to helicases" ytyel033w - 99,0,0,0 "null" "weak similarity to Sauroleishmania mitochondrial hypothetical ORF-5 protein" ------------------