Rule 222: eval(_1,_2,gte1.1),classification(_2,anamorphic_saccharomycetales) = 1 eval(_1,_2,b4.0e-4_4.5e-2),classification(_2,spiroplasmataceae) = 0 yeast_to_yeast(_1,_2,b0.0_2.0e-7),eval(_1,_3,b4.0e-4_4.5e-2),classification(_3,leishmania) = 1 eval(_1,_2,gte1.1),classification(_2,rhizobium),keyword(_2,transmembrane) = 1 eval(_1,_2,b0.0_1.0e-8),sq_len(_2,b16_344),keyword(_2,transmembrane) = 1 -> class 67/4/1/2 "other cation transporters (Na, K, Ca , NH4, etc.)" Evaluation on training data (482 items): ytq0085 - 13,1,1,3 "ATP6" "F1F0-ATPase complex, FO A subunit" 2,13,0,0 "ATP6" "F1F0-ATPase complex, FO A subunit" 40,16,0,0 "ATP6" "F1F0-ATPase complex, FO A subunit" 67,50,22,0 "ATP6" "F1F0-ATPase complex, FO A subunit" 8,4,0,0 "ATP6" "F1F0-ATPase complex, FO A subunit" ytyal026c 40,8,0,0 "DRS2" "P-type amino-phospholipids-ATPase" 67,4,1,2 "DRS2" "P-type amino-phospholipids-ATPase" 67,50,22,0 "DRS2" "P-type amino-phospholipids-ATPase" 8,7,0,0 "DRS2" "P-type amino-phospholipids-ATPase" ytybr235w 13,1,1,99 "null" "similarity to bumetanide-sensitive Na-K-Cl cotransport protein" 13,1,3,5 "null" "similarity to bumetanide-sensitive Na-K-Cl cotransport protein" 67,4,1,2 "null" "similarity to bumetanide-sensitive Na-K-Cl cotransport protein" 67,4,7,0 "null" "similarity to bumetanide-sensitive Na-K-Cl cotransport protein" ytypl036w 13,1,1,3 "PMA2" "H+-transporting P-type ATPase, minor isoform, plasma membrane" 40,2,0,0 "PMA2" "H+-transporting P-type ATPase, minor isoform, plasma membrane" 67,4,1,2 "PMA2" "H+-transporting P-type ATPase, minor isoform, plasma membrane" 67,50,22,0 "PMA2" "H+-transporting P-type ATPase, minor isoform, plasma membrane" ytypl234c 13,1,1,3 "TFP3" "H+-ATPase V0 domain 17 KD subunit, vacuolar" 40,25,0,0 "TFP3" "H+-ATPase V0 domain 17 KD subunit, vacuolar" 6,10,0,0 "TFP3" "H+-ATPase V0 domain 17 KD subunit, vacuolar" 67,4,1,2 "TFP3" "H+-ATPase V0 domain 17 KD subunit, vacuolar" 67,50,22,0 "TFP3" "H+-ATPase V0 domain 17 KD subunit, vacuolar" 8,13,0,0 "TFP3" "H+-ATPase V0 domain 17 KD subunit, vacuolar" ytydr456w 11,1,0,0 "NHX1" "NA+-H+ antiporter" 13,1,1,3 "NHX1" "NA+-H+ antiporter" 13,1,1,99 "NHX1" "NA+-H+ antiporter" 40,16,0,0 "NHX1" "NA+-H+ antiporter" 67,4,1,2 "NHX1" "NA+-H+ antiporter" 8,7,0,0 "NHX1" "NA+-H+ antiporter" ytyel027w 11,7,0,0 "CUP5" "H+-ATPase V0 domain 17 KD subunit, vacuolar" 13,1,1,3 "CUP5" "H+-ATPase V0 domain 17 KD subunit, vacuolar" 40,25,0,0 "CUP5" "H+-ATPase V0 domain 17 KD subunit, vacuolar" 67,4,1,2 "CUP5" "H+-ATPase V0 domain 17 KD subunit, vacuolar" 67,50,22,0 "CUP5" "H+-ATPase V0 domain 17 KD subunit, vacuolar" 8,13,0,0 "CUP5" "H+-ATPase V0 domain 17 KD subunit, vacuolar" ytygl167c 13,1,1,99 "PMR1" "Ca2+-transporting P-type ATPase" 40,8,0,0 "PMR1" "Ca2+-transporting P-type ATPase" 67,4,1,2 "PMR1" "Ca2+-transporting P-type ATPase" 67,50,22,0 "PMR1" "Ca2+-transporting P-type ATPase" 8,7,0,0 "PMR1" "Ca2+-transporting P-type ATPase" ytyhl016c 13,1,1,99 "DUR3" "urea transport protein" 13,1,3,99 "DUR3" "urea transport protein" 40,2,0,0 "DUR3" "urea transport protein" 67,4,1,2 "DUR3" "urea transport protein" 67,4,7,0 "DUR3" "urea transport protein" ytyhr026w 40,25,0,0 "PPA1" "H+-ATPase 23 KD subunit, vacuolar" 67,4,1,2 "PPA1" "H+-ATPase 23 KD subunit, vacuolar" 67,50,22,0 "PPA1" "H+-ATPase 23 KD subunit, vacuolar" ytyjl094c 13,1,1,3 "KHA1" "K+/H+ exchanger" 13,1,1,99 "KHA1" "K+/H+ exchanger" 67,4,1,2 "KHA1" "K+/H+ exchanger" Training Accuracy: 10/11 (90.91%) Training Frequency class '67/4/1/2': 18/482 (3.73%) Evaluation on validation data (247 items): ytydl128w 13,1,1,3 "VCX1" "Ca2+-transport (H+/Ca2+ exchange) protein, vacuolar" 13,1,1,99 "VCX1" "Ca2+-transport (H+/Ca2+ exchange) protein, vacuolar" 40,25,0,0 "VCX1" "Ca2+-transport (H+/Ca2+ exchange) protein, vacuolar" 67,4,1,2 "VCX1" "Ca2+-transport (H+/Ca2+ exchange) protein, vacuolar" 8,13,0,0 "VCX1" "Ca2+-transport (H+/Ca2+ exchange) protein, vacuolar" ytyel031w 13,1,1,99 "SPF1" "P-type ATPase" 67,4,1,2 "SPF1" "P-type ATPase" 67,50,22,0 "SPF1" "P-type ATPase" ytyjr117w - 14,4,3,3 "STE24" "zinc metallo-protease" 40,7,0,0 "STE24" "zinc metallo-protease" 6,7,0,0 "STE24" "zinc metallo-protease" Validation Accuracy: 2/3 (66.67%) Validation Frequency class '67/4/1/2': 8/247 (3.24%) Evaluation on propertest data (368 items): ytybr296c - 1,4,7,0 "PHO89" "Na+-coupled phosphate transport protein, high affinity" 13,1,1,99 "PHO89" "Na+-coupled phosphate transport protein, high affinity" 13,1,3,3 "PHO89" "Na+-coupled phosphate transport protein, high affinity" 67,4,7,0 "PHO89" "Na+-coupled phosphate transport protein, high affinity" ytypr003c - 13,1,3,1 "null" "similarity to sulphate transporter proteins" 67,4,7,0 "null" "similarity to sulphate transporter proteins" ytydr038c - 13,1,1,99 "ENA5" "P-type ATPase involved in Na+ efflux" 67,50,22,0 "ENA5" "P-type ATPase involved in Na+ efflux" ytydr160w - 1,1,4,0 "SSY1" "transcriptional regulator of several transporter genes" 4,5,1,4 "SSY1" "transcriptional regulator of several transporter genes" ytygl008c 13,1,1,3 "PMA1" "H+-transporting P-type ATPase, major isoform, plasma membrane" 40,2,0,0 "PMA1" "H+-transporting P-type ATPase, major isoform, plasma membrane" 67,4,1,2 "PMA1" "H+-transporting P-type ATPase, major isoform, plasma membrane" 67,50,22,0 "PMA1" "H+-transporting P-type ATPase, major isoform, plasma membrane" Propertest Accuracy: 1/5 (20.00%) Propertest Frequency class '67/4/1/2': 9/368 (2.45%) New (unknown) data (247 items): ytq0144 - 99,0,0,0 "null" "questionable ORF" ytybr004c - 99,0,0,0 "null" "similarity to S.pombe hypothetical protein SPAC18B11.05" ytybr187w - 99,0,0,0 "null" "similarity to mouse putative transmembrane protein FT27" ytydl054c - 99,0,0,0 "null" "similarity to hypothetical protein C. albicans" ytynl275w - 98,0,0,0 "null" "similarity to human band 3 anion transport protein" ytynl326c - 99,0,0,0 "null" "similarity to YOL003c, YLR246w and C.elegans hypothetical protein ZK757.1" ytypl264c - 99,0,0,0 "null" "strong similarity to YMR253c" ytydl222c - 99,0,0,0 "null" "strong similarity to hypothetical protein YNL194c and similarity to YML052w" ytydr411c - 99,0,0,0 "null" "weak similarity to DER1P" ytylr414c - 99,0,0,0 "null" "weak similarity to YLR413w" ytyml038c - 99,0,0,0 "YMD8" "similarity to vanadate resistance protein GOG5P, member of the triose phosphate translocater family of membrane transporters" ytymr034c - 99,0,0,0 "null" "weak similarity to YPR201w" ytymr155w - 99,0,0,0 "null" "weak similarity to E.coli hypothetical protein f402" ------------------