====================================================== Media tables (comparison of knockout with wildtype) k < w, k = w, k > w ====================================================== max_od_emg media < = > defined 2 5 1 defplus 0 4 4 rich 4 1 3 dur_linear media < = > defined 1 7 0 defplus 0 7 1 rich 4 2 2 end_linear media < = > defined 0 7 1 defplus 0 7 1 rich 4 1 3 start_linear media < = > defined 0 7 1 defplus 0 7 1 rich 4 1 3 miy_lag_time media < = > defined 0 7 1 defplus 1 6 1 rich 4 1 3 sn_ratio media < = > defined 1 7 0 defplus 1 7 0 rich 2 5 1 max_od_time_emg media < = > defined 4 3 1 defplus 1 6 1 rich 4 4 0 lag_time media < = > defined 0 8 0 defplus 0 8 0 rich 1 6 1 double_time media < = > defined 6 1 1 defplus 2 4 2 rich 6 2 0 threshold media < = > defined 2 0 6 defplus 2 3 3 rich 0 2 6 linear_slope media < = > defined 2 1 5 defplus 2 4 2 rich 0 2 6 global_max_od_time media < = > defined 1 7 0 defplus 1 7 0 rich 2 2 4 global_max_od media < = > defined 2 6 0 defplus 1 5 2 rich 4 1 3 ============================================================ Strain tables (comparison with nutrient vs without nutrient) m+ < m, m+ = m, m+ > m ============================================================ max_od_emg strain < = > knockout 0 3 5 wildtype 1 6 1 dur_linear strain < = > knockout 5 3 0 wildtype 6 2 0 end_linear strain < = > knockout 4 2 2 wildtype 5 3 0 start_linear strain < = > knockout 1 6 1 wildtype 1 6 1 miy_lag_time strain < = > knockout 1 7 0 wildtype 1 7 0 sn_ratio strain < = > knockout 0 8 0 wildtype 2 6 0 max_od_time_emg strain < = > knockout 4 2 2 wildtype 7 1 0 lag_time strain < = > knockout 0 7 1 wildtype 0 8 0 double_time strain < = > knockout 5 1 2 wildtype 7 0 1 threshold strain < = > knockout 1 1 6 wildtype 2 0 6 linear_slope strain < = > knockout 1 1 6 wildtype 2 0 6 global_max_od_time strain < = > knockout 0 7 1 wildtype 2 6 0 global_max_od strain < = > knockout 0 7 1 wildtype 0 7 1 ============================================================ Delta-delta tables (four way comparison) delta_k < delta_w, delta_k = delta_w, delta_k > delta_w ============================================================ max_od_emg < = > 0 8 0 [] dur_linear < = > 0 7 1 ['YHR163W/C00064:jan07-trial1-expt001-plate009'] end_linear < = > 0 7 1 ['YHR163W/C00064:jan07-trial1-expt001-plate009'] start_linear < = > 0 7 1 ['YHR163W/C00064:jan07-trial1-expt001-plate009'] miy_lag_time < = > 0 7 1 ['YHR163W/C00064:jan07-trial1-expt001-plate009'] sn_ratio < = > 0 7 1 ['YHR163W/C00064:jan07-trial1-expt001-plate009'] max_od_time_emg < = > 0 6 2 ['YHR163W/C00064:jan07-trial1-expt001-plate009', 'YNR027W/C00064:jan07-trial1-expt001-plate010'] lag_time < = > 0 8 0 [] double_time < = > 0 7 1 ['YDL168W/C00064:jan07-trial1-expt001-plate008'] threshold < = > 1 6 1 ['YPR121W/C00064:feb07-trial1-expt001-plate005', 'YDL168W/C00064:jan07-trial1-expt001-plate008'] linear_slope < = > 1 6 1 ['YPR121W/C00064:feb07-trial1-expt001-plate005', 'YDL168W/C00064:jan07-trial1-expt001-plate008'] global_max_od_time < = > 0 7 1 ['YDL168W/C00064:jan07-trial1-expt001-plate008'] global_max_od < = > 0 8 0 []