Functional class predictions for ORFs in the Arabidopsis genome

These are the predictions made for A. thaliana ORFs. The classes were taken from the MIPS functional catalog on 3/3/04 and GeneOntology on 2/3/04 and are listed at Arabidopsis classes. The predictions are described in the paper Functional Genomics for Arabidopsis thaliana, Bioinformatics. See also the results of similar work for Saccharomyces cerevisiae.

For a more user-friendly representation of these predictions go to http://www.genepredictions.org/.

GOall

dataset Level 1 Level 2 Level 3 Level 4
seq 1 2 3 4
struc 1 2 3 4
scop 1 2 3 4
hom 1 2 3 4
interpro 1 2 3 4
exprindiv 1 2 3 4
composite 1 2 3 4

GOmanual

dataset Level 1 Level 2 Level 3 Level 4
seq 1 2 3 4
struc 1 2 3 4
scop 1 2 3 4
hom 1 2 3 4
interpro 1 2 3 4
exprindiv 1 2 3 4
composite 1 2 3 4

mipsauto

dataset Level 1 Level 2 Level 3 Level 4
seq 1 2 3 4
struc 1 2 3 4
scop 1 2 3 4
hom 1 2 3 4
interpro 1 2 3 4
exprindiv 1 2 3 4
composite 1 2 3 4

mipsmanual

dataset Level 1 Level 2 Level 3 Level 4
seq 1 2 3 4
struc 1 2 3 4
scop 1 2 3 4
hom 1 2 3 4
interpro 1 2 3 4
exprindiv 1 2 3 4
composite 1 2 3 4