Functional class predictions for ORFs in the Arabidopsis genome

These are the predictions made for A. thaliana ORFs. The classes were taken from the MIPS functional catalog on 3/3/04 and GeneOntology on 2/3/04 and are listed at Arabidopsis classes. The predictions are described in the paper Functional Genomics for Arabidopsis thaliana, Bioinformatics. See also the results of similar work for Yeast Preds.

For a more user-friendly representation of these predictions go to http://www.genepredictions.org/.

GOall

dataset	Level 1	Level 2	Level 3	Level 4
seq	1	2	3	4
struc	1	2	3	4
scop	1	2	3	4
hom	1	2	3	4
interpro	1	2	3	4
exprindiv	1	2	3	4
composite	1	2	3	4

GOmanual

dataset	Level 1	Level 2	Level 3	Level 4
seq	1	2	3	4
struc	1	2	3	4
scop	1	2	3	4
hom	1	2	3	4
interpro	1	2	3	4
exprindiv	1	2	3	4
composite	1	2	3	4

mipsauto

dataset	Level 1	Level 2	Level 3	Level 4
seq	1	2	3	4
struc	1	2	3	4
scop	1	2	3	4
hom	1	2	3	4
interpro	1	2	3	4
exprindiv	1	2	3	4
composite	1	2	3	4

mipsmanual

dataset	Level 1	Level 2	Level 3	Level 4
seq	1	2	3	4
struc	1	2	3	4
scop	1	2	3	4
hom	1	2	3	4
interpro	1	2	3	4
exprindiv	1	2	3	4
composite	1	2	3	4